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revbayes: update for 1.1.0 (#16603)

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* revbayes: update for 1.1.0

* revbayes: Fix flake8
This commit is contained in:
Nick Booher 2020-05-12 14:26:44 -05:00 committed by GitHub
parent 0307111dd8
commit 9bdf4564db
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GPG Key ID: 4AEE18F83AFDEB23
1 changed files with 20 additions and 8 deletions
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28
var/spack/repos/builtin/packages/revbayes/package.py
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@ -11,10 +11,11 @@ class Revbayes(CMakePackage):
and an interpreted language."""
homepage = "https://revbayes.github.io"
url = "https://github.com/revbayes/revbayes/archive/v1.0.11.tar.gz"
url = "https://github.com/revbayes/revbayes/archive/1.1.0.tar.gz"
git = "https://github.com/revbayes/revbayes.git"
version('develop', branch='development')
version('1.1.0', sha256='6adede8148cb10e4e75dba8da28cf5c747ea8de71a5aa24990ab9ae17e43b0b1')
version('1.0.13', sha256='e85e2e1fe182fe9f504900150d936a06d252a362c591b9d3d8272dd085aa85d9')
version('1.0.12', sha256='80c926bb6b37288d02e36e07b44e4663841cd1fe541e2cc0b0e44c89ca929759')
version('1.0.11', sha256='03052194baa220dde7e622a739f09f34393f67ea00a0b163b409d313d7fc7c02')
@ -29,17 +30,27 @@ class Revbayes(CMakePackage):
def url_for_version(self, version):
if version > Version('1.0.13'):
return 'https://github.com/revbayes/revbayes/archive/v{0}.tar.gz'.format(version)
return 'https://github.com/revbayes/revbayes/archive/{0}.tar.gz'.format(version)
else:
return 'https://github.com/revbayes/revbayes.archive/archive/v{0}.tar.gz'.format(version)
@property
def root_cmakelists_dir(self):
if self.spec.version > Version('1.0.13') and '+mpi' in self.spec:
return 'projects/cmake/build-mpi'
if self.spec.version > Version('1.0.13'):
return 'src'
else:
return 'projects/cmake/build'
@when('@1.1.0:')
def cmake_args(self):
args = []
if '+mpi' in self.spec:
args.extend([
self.define('MPI', 'ON'),
self.define('RB_EXEC_NAME', 'rb-mpi'),
])
return args
@run_before('cmake')
def regenerate(self):
with working_dir(join_path('projects', 'cmake')):
@ -49,10 +60,11 @@ def regenerate(self):
generate_version()
dest = join_path('..', '..', 'src', 'revlanguage', 'utils')
install('GitVersion.cpp', dest)
edit = FileFilter('regenerate.sh')
edit.filter('boost="true"', 'boost="false"')
if '+mpi' in self.spec:
edit.filter('mpi="false"', 'mpi="true"')
else:
edit = FileFilter('regenerate.sh')
edit.filter('boost="true"', 'boost="false"')
if '+mpi' in self.spec:
edit.filter('mpi="false"', 'mpi="true"')
regenerate = Executable('./regenerate.sh')
regenerate()