ncbi-rmblastn: adding new version 2.14.0 (#38173)

* ncbi-rmblastn: adding new version 2.14.0
* ncbi-rmblastn: add maintainer
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snehring 2023-06-05 13:45:15 -05:00 committed by GitHub
parent 9865f42335
commit 9bfa840c27
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@ -9,12 +9,15 @@
class NcbiRmblastn(AutotoolsPackage):
"""RMBlast search engine for NCBI"""
homepage = "https://www.repeatmasker.org/RMBlast.html"
homepage = "https://www.repeatmasker.org/rmblast/"
url = "ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.9.0/ncbi-blast-2.9.0+-src.tar.gz"
version("2.14.0", sha256="bf477f1b0c3b82f0b7a7094bf003a9a83e37e3b0716c1df799060c4feab17500")
version("2.11.0", sha256="d88e1858ae7ce553545a795a2120e657a799a6d334f2a07ef0330cc3e74e1954")
version("2.9.0", sha256="a390cc2d7a09422759fc178db84de9def822cbe485916bbb2ec0d215dacdc257")
maintainers("snehring")
# There is a corresponding gzipped patch file associated with each version.
# According to the documentation, https://www.repeatmasker.org/RMBlast.html,
# Download NCBI Blast+ and rmblast patch file:
@ -22,6 +25,12 @@ class NcbiRmblastn(AutotoolsPackage):
# isb-2.11.0+-rmblast.patch.gz
# The patch is downloaded and unzipped in the ncbi-rmblastn Spack package
# directory to make it available for the patch directive.
patch(
"http://www.repeatmasker.org/rmblast/isb-2.14.0+-rmblast.patch.gz",
sha256="cd083f256551c6d6021897a1b08e023976e82c59576787d4885f57d36f9e6fdf",
archive_sha256="9de0e67467a4cffdde0c5f67e3658fb52ed313e4550f9a36a251bddb2ba33f49",
when="@2.14.0",
)
patch(
"https://www.repeatmasker.org/isb-2.11.0+-rmblast.patch.gz",
sha256="ce985abd3512834adb9ad3e4078fbf9608a33a2ee6538a1e94b641490c92f899",
@ -37,6 +46,9 @@ class NcbiRmblastn(AutotoolsPackage):
depends_on("cpio", type="build")
depends_on("boost")
depends_on("lzo")
depends_on("bzip2")
depends_on("zstd")
depends_on("xz")
configure_directory = "c++"