add tutorial setup script to share/spack (#17705)
* add tutorial setup script to share/spack * Add check for Ubuntu 18, fix xvda check, fix apt-get errors - now works on t2.micro, t2.small, and m instances - apt-get needs retries around it to work Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
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								share/spack/setup-tutorial-env.sh
									
									
									
									
									
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								share/spack/setup-tutorial-env.sh
									
									
									
									
									
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							| @@ -0,0 +1,123 @@ | ||||
| # Copyright 2013-2020 Lawrence Livermore National Security, LLC and other | ||||
| # Spack Project Developers. See the top-level COPYRIGHT file for details. | ||||
| # | ||||
| # SPDX-License-Identifier: (Apache-2.0 OR MIT) | ||||
|  | ||||
| ############################################################################### | ||||
| # | ||||
| # This file is part of Spack and sets up the environment for the Spack tutorial | ||||
| # It is intended to be run on ubuntu-18.04 or an ubuntu-18.04 container or AWS | ||||
| # cloud9 environment | ||||
| # | ||||
| # Components: | ||||
| # 1. apt installs for packages used in the tutorial | ||||
| #     these include compilers and externals used by the tutorial and | ||||
| #     basic spack requirements like python and curl | ||||
| # 2. spack configuration files | ||||
| #     these set the default configuration for Spack to use x86_64 and suppress | ||||
| #     certain gpg warnings. The gpg warnings are not relevant for the tutorial | ||||
| #     and the default x86_64 architecture allows us to run the same tutorial on | ||||
| #     any x86_64 architecture without needing new binary packages. | ||||
| # 3. aws cloud9 configuration to expand available storage | ||||
| #     when we run on aws cloud9 we have to expand the storage from 10G to 30G | ||||
| #     because we install too much software for a default cloud9 instance | ||||
| ############################################################################### | ||||
|  | ||||
| #### | ||||
| # Ensure we're on Ubuntu 18.04 | ||||
| #### | ||||
|  | ||||
| if [ -f /etc/os-release ]; then | ||||
|     . /etc/os-release | ||||
| fi | ||||
| if [ x"$UBUNTU_CODENAME" != "xbionic" ]; then | ||||
|     echo "The tutorial setup script must be run on Ubuntu 18.04." | ||||
|     return 1 &>/dev/null || exit 1    # works if sourced or run | ||||
| fi | ||||
|  | ||||
| #### | ||||
| # Install packages needed for tutorial | ||||
| #### | ||||
|  | ||||
| # compilers, basic system components, externals | ||||
| # There are retries around these because apt fails frequently on new instances, | ||||
| # due to unattended updates running in the background and taking the lock. | ||||
| until sudo apt-get update -y; do | ||||
|     echo "==> apt-get update failed. retrying..." | ||||
|     sleep 5 | ||||
| done | ||||
|  | ||||
| until sudo apt-get install -y --no-install-recommends \ | ||||
|     autoconf make python3 python3-pip \ | ||||
|     build-essential ca-certificates curl git gnupg2 iproute2 emacs \ | ||||
|     file openssh-server tcl unzip vim wget \ | ||||
|     clang g++ g++-6 gcc gcc-6 gfortran gfortran-6 \ | ||||
|     zlib1g zlib1g-dev mpich; do | ||||
|     echo "==> apt-get install failed. retrying..." | ||||
|     sleep 5 | ||||
| done | ||||
|  | ||||
| #### | ||||
| # Spack configuration settings for tutorial | ||||
| #### | ||||
|  | ||||
| # create spack system config | ||||
| sudo mkdir -p /etc/spack | ||||
|  | ||||
| # set default arch to x86_64 | ||||
| sudo tee /etc/spack/packages.yaml << EOF > /dev/null | ||||
| packages: | ||||
|   all: | ||||
|     target: [x86_64] | ||||
| EOF | ||||
|  | ||||
| # suppress gpg warnings | ||||
| sudo tee /etc/spack/config.yaml << EOF > /dev/null | ||||
| config: | ||||
|   suppress_gpg_warnings: true | ||||
| EOF | ||||
|  | ||||
| #### | ||||
| # AWS set volume size to at least 30G | ||||
| #### | ||||
|  | ||||
| # Hardcode the specified size to 30G | ||||
| SIZE=30 | ||||
|  | ||||
| # Get the ID of the environment host Amazon EC2 instance. | ||||
| INSTANCEID=$(curl http://169.254.169.254/latest/meta-data//instance-id) | ||||
|  | ||||
| # Get the ID of the Amazon EBS volume associated with the instance. | ||||
| VOLUMEID=$(aws ec2 describe-instances \ | ||||
| 	       --instance-id $INSTANCEID \ | ||||
| 	       --query "Reservations[0].Instances[0].BlockDeviceMappings[0].Ebs.VolumeId" \ | ||||
| 	       --output text) | ||||
|  | ||||
| # Resize the EBS volume. | ||||
| aws ec2 modify-volume --volume-id $VOLUMEID --size $SIZE | ||||
|  | ||||
| # Wait for the resize to finish. | ||||
| while [ \ | ||||
| 	  "$(aws ec2 describe-volumes-modifications \ | ||||
|     --volume-id $VOLUMEID \ | ||||
|     --filters Name=modification-state,Values="optimizing","completed" \ | ||||
|     --query "length(VolumesModifications)"\ | ||||
|     --output text)" != "1" ]; do | ||||
|     sleep 1 | ||||
| done | ||||
|  | ||||
| if [ -e /dev/xvda1 ] | ||||
| then | ||||
|     # Rewrite the partition table so that the partition takes up all the space that it can. | ||||
|     sudo growpart /dev/xvda 1 | ||||
|  | ||||
|     # Expand the size of the file system. | ||||
|     sudo resize2fs /dev/xvda1 | ||||
|  | ||||
| else | ||||
|     # Rewrite the partition table so that the partition takes up all the space that it can. | ||||
|     sudo growpart /dev/nvme0n1 1 | ||||
|  | ||||
|     # Expand the size of the file system. | ||||
|     sudo resize2fs /dev/nvme0n1p1 | ||||
| fi | ||||
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