crtm: overhaul package, add crtm-fix (#34715)
Update crtm from JCSDA-EMC spack fork, add crtm-fix
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Dom Heinzeller
GitHub
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184a75ec54
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9e845635ce
81
var/spack/repos/builtin/packages/crtm-fix/package.py
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81
var/spack/repos/builtin/packages/crtm-fix/package.py
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@ -0,0 +1,81 @@
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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
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# Spack Project Developers. See the top-level COPYRIGHT file for details.
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#
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# SPDX-License-Identifier: (Apache-2.0 OR MIT)
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import os
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from spack.package import *
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class CrtmFix(Package):
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"""CRTM coefficient files"""
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homepage = "https://github.com/NOAA-EMC/crtm"
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url = "ftp://ftp.ssec.wisc.edu/pub/s4/CRTM/fix_REL-2.3.0_emc.tgz"
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maintainers = [
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"BenjaminTJohnson",
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"edwardhartnett",
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"AlexanderRichert-NOAA",
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"Hang-Lei-NOAA",
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"climbfuji",
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]
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version("2.4.0_emc", sha256="88d659ae5bc4434f7fafa232ff65b4c48442d2d1a25f8fc96078094fa572ac1a")
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version("2.3.0_emc", sha256="1452af2d1d11d57ef3c57b6b861646541e7042a9b0f3c230f9a82854d7e90924")
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variant("big_endian", default=True, description="Install big_endian fix files")
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variant("little_endian", default=False, description="Install little endian fix files")
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variant("netcdf", default=True, description="Install netcdf fix files")
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conflicts("+big_endian", when="+little_endian", msg="big_endian and little_endian conflict")
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def url_for_version(self, version):
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url = "ftp://ftp.ssec.wisc.edu/pub/s4/CRTM/fix_REL-{}.tgz"
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return url.format(version)
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def install(self, spec, prefix):
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spec = self.spec
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mkdir(self.prefix.fix)
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endian_dirs = []
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if "+big_endian" in spec:
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endian_dirs.append("Big_Endian")
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elif "+little_endian" in spec:
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endian_dirs.append("Little_Endian")
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if "+netcdf" in spec:
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endian_dirs.extend(["netcdf", "netCDF"])
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fix_files = []
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for d in endian_dirs:
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fix_files = fix_files + find(".", "*/{}/*".format(d))
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# Big_Endian amsua_metop-c.SpcCoeff.bin is incorrect
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# Little_Endian amsua_metop-c_v2.SpcCoeff.bin is what it's supposed to be.
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# Remove the incorrect file, and install it as noACC,, then install
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# correct file under new name.
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if "+big_endian" in spec and spec.version == Version("2.4.0_emc"):
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remove_path = join_path(
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os.getcwd(), "fix", "SpcCoeff", "Big_Endian", "amsua_metop-c.SpcCoeff.bin"
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)
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fix_files.remove(remove_path)
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# This file is incorrect, install it as a different name.
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install(
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join_path("fix", "SpcCoeff", "Big_Endian", "amsua_metop-c.SpcCoeff.bin"),
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join_path(self.prefix.fix, "amsua_metop-c.SpcCoeff.noACC.bin"),
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)
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# This "Little_Endian" file is actually the correct one.
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install(
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join_path("fix", "SpcCoeff", "Little_Endian", "amsua_metop-c_v2.SpcCoeff.bin"),
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join_path(self.prefix.fix, "amsua_metop-c.SpcCoeff.bin"),
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)
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for f in fix_files:
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install(f, self.prefix.fix)
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def setup_run_environment(self, env):
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env.set("CRTM_FIX", self.prefix.fix)
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@ -13,13 +13,55 @@ class Crtm(CMakePackage):
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scattering, and a solver for a radiative transfer."""
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homepage = "https://www.jcsda.org/jcsda-project-community-radiative-transfer-model"
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url = "https://github.com/NOAA-EMC/EMC_crtm/archive/refs/tags/v2.3.0.tar.gz"
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git = "https://github.com/JCSDA/crtm.git"
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url = "https://github.com/JCSDA/crtm/archive/refs/tags/v2.3.0.tar.gz"
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maintainers = [
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"BenjaminTJohnson",
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"t-brown",
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"edwardhartnett",
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"AlexanderRichert-NOAA",
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"Hang-Lei-NOAA",
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"climbfuji",
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]
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version("2.3.0", sha256="3e2c87ae5498c33dd98f9ede5c39e33ee7f298c7317b12adeb552e3a572700ce")
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variant(
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"fix",
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default=False,
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description='Download CRTM coeffecient or "fix" files (several GBs).',
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)
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variant(
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"build_type",
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default="RelWithDebInfo",
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description="CMake build type",
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values=("Debug", "Release", "RelWithDebInfo", "MinSizeRel"),
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)
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depends_on("cmake@3.15:")
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depends_on("git-lfs")
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depends_on("netcdf-fortran", when="@2.4.0:")
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depends_on("netcdf-fortran", when="@v2.3-jedi.4")
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depends_on("netcdf-fortran", when="@v2.4-jedi.1")
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depends_on("netcdf-fortran", when="@v2.4-jedi.2")
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depends_on("crtm-fix@2.3.0_emc", when="@2.3.0 +fix")
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depends_on("crtm-fix@2.4.0_emc", when="@2.4.0 +fix")
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depends_on("ecbuild", type=("build"), when="@v2.3-jedi.4")
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depends_on("ecbuild", type=("build"), when="@v2.4-jedi.1")
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depends_on("ecbuild", type=("build"), when="@v2.4-jedi.2")
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# ecbuild release v2.4.0 is broken
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# add ecbuild dependency for next release with fix
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# depends_on("ecbuild", when="@2.4.0:", type=("build"))
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# REL-2.4.0_emc (v2.4.0 ecbuild does not work)
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version("2.4.0", commit="5ddd0d6")
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# Uses the tip of REL-2.3.0_emc branch
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version("2.3.0", commit="99760e6")
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# JEDI applications so far use these versions
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# Branch release/crtm_jedi
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version("v2.3-jedi.4", commit="bfede42")
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# Branch release/crtm_jedi_v2.4.0
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version("v2.4-jedi.1", commit="8222341")
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version("v2.4-jedi.2", commit="62831cb")
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