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Partial merge of mainline develop

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Gregory Becker 2016-05-18 15:13:40 -07:00
commit 9f59c128be
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34
.coveragerc Normal file
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@ -0,0 +1,34 @@
# -*- conf -*-
# .coveragerc to control coverage.py
[run]
branch = True
source = lib
omit =
lib/spack/spack/test/*
lib/spack/env/*
lib/spack/docs/*
lib/spack/external/*
[report]
# Regexes for lines to exclude from consideration
exclude_lines =
# Have to re-enable the standard pragma
pragma: no cover
# Don't complain about missing debug-only code:
def __repr__
if self\.debug
# Don't complain if tests don't hit defensive assertion code:
raise AssertionError
raise NotImplementedError
# Don't complain if non-runnable code isn't run:
if 0:
if False:
if __name__ == .__main__.:
ignore_errors = True
[html]
directory = htmlcov

20
.flake8 Normal file
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@ -0,0 +1,20 @@
# -*- conf -*-
# flake8 settings for Spack.
#
# Below we describe which flake8 checks Spack ignores and what the
# rationale is.
#
# Let people line things up nicely:
# - E221: multiple spaces before operator
# - E241: multiple spaces after ‘,’
#
# Spack allows wildcard imports:
# - F403: disable wildcard import
#
# These are required to get the package.py files to test clean.
# - F821: undefined name (needed for cmake, configure, etc.)
# - F999: name name be undefined or undefined from star imports.
#
[flake8]
ignore = E221,E241,F403,F821,F999
max-line-length = 79

2
.gitignore vendored
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@ -9,3 +9,5 @@
/share/spack/dotkit
/share/spack/modules
/TAGS
/htmlcov
.coverage

23
.travis.yml
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@ -6,17 +6,34 @@ python:
# Use new Travis infrastructure (Docker can't sudo yet)
sudo: false
# No need to install any deps.
install: true
# Install coveralls to obtain code coverage
install:
- "pip install coveralls"
- "pip install flake8"
before_install:
# Need this for the git tests to succeed.
- git config --global user.email "spack@example.com"
- git config --global user.name "Test User"
# Need this to be able to compute the list of changed files
- git fetch origin develop:develop
script:
# Regular spack setup and tests
- . share/spack/setup-env.sh
- spack test
- spack compilers
- spack config get compilers
- spack install -v libdwarf
# Run unit tests with code coverage
- coverage run bin/spack test
# Run flake8 code style checks.
- share/spack/qa/run-flake8
after_success:
- coveralls
notifications:
email:

64
LICENSE
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@ -1,56 +1,62 @@
Copyright (c) 2013-2014, Lawrence Livermore National Security, LLC.
########################################################################
GNU LESSER GENERAL PUBLIC LICENSE (Lesser GPL)
Version 2.1, February 1999
########################################################################
Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
Produced at the Lawrence Livermore National Laboratory.
This file is part of Spack.
Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
LLNL-CODE-647188
For details, see https://github.com/llnl/spack
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License (as published by
the Free Software Foundation) version 2.1 dated February 1999.
it under the terms of the GNU Lesser General Public License (as
published by the Free Software Foundation) version 2.1, February 1999.
This program is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
conditions of the GNU General Public License for more details.
conditions of the GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License
along with this program; if not, write to the Free Software Foundation,
Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
You should have received a copy of the GNU Lesser General Public
License along with this program; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
OUR NOTICE AND TERMS AND CONDITIONS OF THE GNU GENERAL PUBLIC LICENSE
########################################################################
LLNL NOTICE AND TERMS AND CONDITIONS OF THE GNU LGPL
Our Preamble Notice
LLNL Preamble Notice
A. This notice is required to be provided under our contract with the
U.S. Department of Energy (DOE). This work was produced at the
Lawrence Livermore National Laboratory under Contract
No. DE-AC52-07NA27344 with the DOE.
A. This notice is required to be provided under LLNL's contract with
the U.S. Department of Energy (DOE). This work was produced at the
Lawrence Livermore National Laboratory under Contract
No. DE-AC52-07NA27344 with the DOE.
B. Neither the United States Government nor Lawrence Livermore
National Security, LLC nor any of their employees, makes any warranty,
express or implied, or assumes any liability or responsibility for the
accuracy, completeness, or usefulness of any information, apparatus,
product, or process disclosed, or represents that its use would not
infringe privately-owned rights.
National Security, LLC nor any of their employees, makes any
warranty, express or implied, or assumes any liability or
responsibility for the accuracy, completeness, or usefulness of any
information, apparatus, product, or process disclosed, or
represents that its use would not infringe privately-owned rights.
C. Also, reference herein to any specific commercial products,
process, or services by trade name, trademark, manufacturer or
otherwise does not necessarily constitute or imply its endorsement,
recommendation, or favoring by the United States Government or
Lawrence Livermore National Security, LLC. The views and opinions of
authors expressed herein do not necessarily state or reflect those of
the United States Government or Lawrence Livermore National Security,
LLC, and shall not be used for advertising or product endorsement
purposes.
process, or services by trade name, trademark, manufacturer or
otherwise does not necessarily constitute or imply its endorsement,
recommendation, or favoring by the United States Government or
Lawrence Livermore National Security, LLC. The views and opinions
of authors expressed herein do not necessarily state or reflect
those of the United States Government or Lawrence Livermore
National Security, LLC, and shall not be used for advertising or
product endorsement purposes.
The precise terms and conditions for copying, distribution and
modification follows.
GNU Lesser GPL terms and Conditions for Copying, Distribution, and
Modification
########################################################################
GNU LESSER GENERAL PUBLIC LICENSE
TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
0. This License Agreement applies to any software library or other
program which contains a notice placed by the copyright holder or

11
README.md
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@ -1,7 +1,8 @@
![image](share/spack/logo/spack-logo-text-64.png "Spack")
============
[![Build Status](https://travis-ci.org/LLNL/spack.png?branch=develop)](https://travis-ci.org/LLNL/spack)
[![Build Status](https://travis-ci.org/LLNL/spack.svg?branch=develop)](https://travis-ci.org/LLNL/spack)
[![Coverage Status](https://coveralls.io/repos/github/LLNL/spack/badge.svg?branch=develop)](https://coveralls.io/github/LLNL/spack?branch=develop)
Spack is a package management tool designed to support multiple
versions and configurations of software on a wide variety of platforms
@ -59,7 +60,13 @@ can join it here:
At the moment, contributing to Spack is relatively simple. Just send us
a [pull request](https://help.github.com/articles/using-pull-requests/).
When you send your request, make ``develop`` the destination branch.
When you send your request, make ``develop`` the destination branch on the
[Spack repository](https://github.com/LLNL/spack).
Your contribution will need to pass all the tests run by the `spack test`
command, as well as the formatting checks in `share/spack/qa/run-flake8`.
You should run both of these before submitting your pull request, to
ensure that the online checks succeed.
Spack is using a rough approximation of the [Git
Flow](http://nvie.com/posts/a-successful-git-branching-model/)

24
bin/sbang
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@ -1,4 +1,28 @@
#!/bin/bash
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
#
# `sbang`: Run scripts with long shebang lines.
#

18
bin/spack
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@ -1,27 +1,27 @@
#!/usr/bin/env python
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
if not sys.version_info[:2] >= (2,6):
@ -152,7 +152,7 @@ def main():
command = spack.cmd.get_command(args.command)
try:
return_val = command(parser, args)
except SpackError, e:
except SpackError as e:
e.die()
except KeyboardInterrupt:
sys.stderr.write('\n')

16
bin/spack-python
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@ -1,27 +1,27 @@
#!/bin/sh
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
#
# spack-python

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etc/spack/modules.yaml Normal file
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@ -0,0 +1,29 @@
# -------------------------------------------------------------------------
# This is the default spack module files generation configuration.
#
# Changes to this file will affect all users of this spack install,
# although users can override these settings in their ~/.spack/modules.yaml.
# -------------------------------------------------------------------------
modules:
enable:
- tcl
- dotkit
prefix_inspections:
bin:
- PATH
man:
- MANPATH
lib:
- LIBRARY_PATH
- LD_LIBRARY_PATH
lib64:
- LIBRARY_PATH
- LD_LIBRARY_PATH
include:
- CPATH
lib/pkgconfig:
- PKGCONFIG
lib64/pkgconfig:
- PKGCONFIG
'':
- CMAKE_PREFIX_PATH

385
lib/spack/docs/basic_usage.rst
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@ -149,26 +149,46 @@ customize an installation in :ref:`sec-specs`.
``spack uninstall``
~~~~~~~~~~~~~~~~~~~~~
To uninstall a package, type ``spack uninstall <package>``. This will
completely remove the directory in which the package was installed.
To uninstall a package, type ``spack uninstall <package>``. This will ask the user for
confirmation, and in case will completely remove the directory in which the package was installed.
.. code-block:: sh
spack uninstall mpich
If there are still installed packages that depend on the package to be
uninstalled, spack will refuse to uninstall it. You can override this
behavior with ``spack uninstall -f <package>``, but you risk breaking
other installed packages. In general, it is safer to remove dependent
packages *before* removing their dependencies.
uninstalled, spack will refuse to uninstall it.
A line like ``spack uninstall mpich`` may be ambiguous, if multiple
``mpich`` configurations are installed. For example, if both
To uninstall a package and every package that depends on it, you may give the
`--dependents` option.
.. code-block:: sh
spack uninstall --dependents mpich
will display a list of all the packages that depends on `mpich` and, upon confirmation,
will uninstall them in the right order.
A line like
.. code-block:: sh
spack uninstall mpich
may be ambiguous, if multiple ``mpich`` configurations are installed. For example, if both
``mpich@3.0.2`` and ``mpich@3.1`` are installed, ``mpich`` could refer
to either one. Because it cannot determine which one to uninstall,
Spack will ask you to provide a version number to remove the
ambiguity. As an example, ``spack uninstall mpich@3.1`` is
unambiguous in this scenario.
Spack will ask you either to provide a version number to remove the
ambiguity or use the ``--all`` option to uninstall all of the matching packages.
You may force uninstall a package with the `--force` option
.. code-block:: sh
spack uninstall --force mpich
but you risk breaking other installed packages. In general, it is safer to remove dependent
packages *before* removing their dependencies or use the `--dependents` option.
Seeing installed packages
@ -352,25 +372,32 @@ how this is done is in :ref:`sec-specs`.
``spack compiler add``
~~~~~~~~~~~~~~~~~~~~~~~
An alias for ``spack compiler find``.
.. _spack-compiler-find:
``spack compiler find``
~~~~~~~~~~~~~~~~~~~~~~~
If you do not see a compiler in this list, but you want to use it with
Spack, you can simply run ``spack compiler add`` with the path to
Spack, you can simply run ``spack compiler find`` with the path to
where the compiler is installed. For example::
$ spack compiler add /usr/local/tools/ic-13.0.079
$ spack compiler find /usr/local/tools/ic-13.0.079
==> Added 1 new compiler to /Users/gamblin2/.spack/compilers.yaml
intel@13.0.079
Or you can run ``spack compiler add`` with no arguments to force
Or you can run ``spack compiler find`` with no arguments to force
auto-detection. This is useful if you do not know where compilers are
installed, but you know that new compilers have been added to your
``PATH``. For example, using dotkit, you might do this::
$ module load gcc-4.9.0
$ spack compiler add
$ spack compiler find
==> Added 1 new compiler to /Users/gamblin2/.spack/compilers.yaml
gcc@4.9.0
This loads the environment module for gcc-4.9.0 to get it into the
This loads the environment module for gcc-4.9.0 to add it to
``PATH``, and then it adds the compiler to Spack.
.. _spack-compiler-info:
@ -761,7 +788,7 @@ versions are now filtered out.
.. _shell-support:
Environment modules
Integration with module systems
-------------------------------
.. note::
@ -771,9 +798,50 @@ Environment modules
interface and/or generated module names may change in future
versions.
Spack provides some limited integration with environment module
systems to make it easier to use the packages it provides.
Spack provides some integration with
`Environment Modules <http://modules.sourceforge.net/>`_
and `Dotkit <https://computing.llnl.gov/?set=jobs&page=dotkit>`_ to make
it easier to use the packages it installed.
Installing Environment Modules
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In order to use Spack's generated environment modules, you must have
installed the *Environment Modules* package. On many Linux
distributions, this can be installed from the vendor's repository:
.. code-block:: sh
yum install environment-modules # (Fedora/RHEL/CentOS)
apt-get install environment-modules # (Ubuntu/Debian)
If your Linux distribution does not have
Environment Modules, you can get it with Spack:
.. code-block:: sh
spack install environment-modules
In this case to activate it automatically you need to add the following two
lines to your ``.bashrc`` profile (or similar):
.. code-block:: sh
MODULES_HOME=`spack location -i environment-modules`
source ${MODULES_HOME}/Modules/init/bash
If you use a Unix shell other than ``bash``, modify the commands above
accordingly and source the appropriate file in
``${MODULES_HOME}/Modules/init/``.
.. TODO : Add a similar section on how to install dotkit ?
Spack and module systems
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
You can enable shell support by sourcing some files in the
``/share/spack`` directory.
@ -781,7 +849,7 @@ For ``bash`` or ``ksh``, run:
.. code-block:: sh
. $SPACK_ROOT/share/spack/setup-env.sh
. ${SPACK_ROOT}/share/spack/setup-env.sh
For ``csh`` and ``tcsh`` run:
@ -793,17 +861,19 @@ For ``csh`` and ``tcsh`` run:
You can put the above code in your ``.bashrc`` or ``.cshrc``, and
Spack's shell support will be available on the command line.
When you install a package with Spack, it automatically generates an
environment module that lets you add the package to your environment.
When you install a package with Spack, it automatically generates a module file
that lets you add the package to your environment.
Currently, Spack supports the generation of `TCL Modules
Currently, Spack supports the generation of `Environment Modules
<http://wiki.tcl.tk/12999>`_ and `Dotkit
<https://computing.llnl.gov/?set=jobs&page=dotkit>`_. Generated
module files for each of these systems can be found in these
directories:
* ``$SPACK_ROOT/share/spack/modules``
* ``$SPACK_ROOT/share/spack/dotkit``
.. code-block:: sh
${SPACK_ROOT}/share/spack/modules
${SPACK_ROOT}/share/spack/dotkit
The directories are automatically added to your ``MODULEPATH`` and
``DK_NODE`` environment variables when you enable Spack's `shell
@ -859,8 +929,7 @@ of installed packages.
The names here should look familiar, they're the same ones from
``spack find``. You *can* use the names here directly. For example,
you could type either of these commands to load the callpath module
(assuming dotkit and modules are installed):
you could type either of these commands to load the callpath module:
.. code-block:: sh
@ -875,7 +944,7 @@ easy to type. Luckily, Spack has its own interface for using modules
and dotkits. You can use the same spec syntax you're used to:
========================= ==========================
Modules Dotkit
Environment Modules Dotkit
========================= ==========================
``spack load <spec>`` ``spack use <spec>``
``spack unload <spec>`` ``spack unuse <spec>``
@ -942,15 +1011,216 @@ used ``gcc``. You could therefore just type:
To identify just the one built with the Intel compiler.
Module files generation and customization
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Regenerating Module files
~~~~~~~~~~~~~~~~~~~~~~~~~~~
Environment Modules and Dotkit files are generated when packages are installed,
and are placed in the following directories under the Spack root:
Module and dotkit files are generated when packages are installed, and
are placed in the following directories under the Spack root:
.. code-block:: sh
* ``$SPACK_ROOT/share/spack/modules``
* ``$SPACK_ROOT/share/spack/dotkit``
${SPACK_ROOT}/share/spack/modules
${SPACK_ROOT}/share/spack/dotkit
The content that gets written in each module file can be customized in two ways:
1. overriding part of the ``spack.Package`` API within a ``package.py``
2. writing dedicated configuration files
Override ``Package`` API
^^^^^^^^^^^^^^^^^^^^^^^^
There are currently two methods in ``spack.Package`` that may affect the content
of module files:
.. code-block:: python
def setup_environment(self, spack_env, run_env):
"""Set up the compile and runtime environments for a package."""
pass
.. code-block:: python
def setup_dependent_environment(self, spack_env, run_env, dependent_spec):
"""Set up the environment of packages that depend on this one"""
pass
As briefly stated in the comments, the first method lets you customize the
module file content for the package you are currently writing, the second
allows for modifications to your dependees module file. In both cases one
needs to fill ``run_env`` with the desired list of environment modifications.
Example : ``builtin/packages/python/package.py``
""""""""""""""""""""""""""""""""""""""""""""""""
The ``python`` package that comes with the ``builtin`` Spack repository
overrides ``setup_dependent_environment`` in the following way:
.. code-block:: python
def setup_dependent_environment(self, spack_env, run_env, extension_spec):
# ...
if extension_spec.package.extends(self.spec):
run_env.prepend_path('PYTHONPATH', os.path.join(extension_spec.prefix, self.site_packages_dir))
to insert the appropriate ``PYTHONPATH`` modifications in the module
files of python packages.
Configuration files
^^^^^^^^^^^^^^^^^^^
Another way of modifying the content of module files is writing a
``modules.yaml`` configuration file. Following usual Spack conventions, this
file can be placed either at *site* or *user* scope.
The default site configuration reads:
.. literalinclude:: ../../../etc/spack/modules.yaml
:language: yaml
It basically inspects the installation prefixes for the
existence of a few folders and, if they exist, it prepends a path to a given
list of environment variables.
For each module system that can be enabled a finer configuration is possible:
.. code-block:: yaml
modules:
tcl:
# contains environment modules specific customizations
dotkit:
# contains dotkit specific customizations
The structure under the ``tcl`` and ``dotkit`` keys is almost equal, and will
be showcased in the following by some examples.
Select module files by spec constraints
"""""""""""""""""""""""""""""""""""""""
Using spec syntax it's possible to have different customizations for different
groups of module files.
Considering :
.. code-block:: yaml
modules:
tcl:
all: # Default addition for every package
environment:
set:
BAR: 'bar'
^openmpi:: # A double ':' overrides previous rules
environment:
set:
BAR: 'baz'
zlib:
environment:
prepend_path:
LD_LIBRARY_PATH: 'foo'
zlib%gcc@4.8:
environment:
unset:
- FOOBAR
what will happen is that:
- every module file will set ``BAR=bar``
- unless the associated spec satisfies ``^openmpi`` in which case ``BAR=baz``
- any spec that satisfies ``zlib`` will additionally prepend ``foo`` to ``LD_LIBRARY_PATH``
- any spec that satisfies ``zlib%gcc@4.8`` will additionally unset ``FOOBAR``
.. note::
Order does matter
The modifications associated with the ``all`` keyword are always evaluated
first, no matter where they appear in the configuration file. All the other
spec constraints are instead evaluated top to bottom.
Filter modifications out of module files
""""""""""""""""""""""""""""""""""""""""
Modifications to certain environment variables in module files are generated by
default. Suppose you would like to avoid having ``CPATH`` and ``LIBRARY_PATH``
modified by your dotkit modules. Then :
.. code-block:: yaml
modules:
dotkit:
all:
filter:
environment_blacklist: ['CPATH', 'LIBRARY_PATH'] # Exclude changes to any of these variables
will generate dotkit module files that will not contain modifications to either
``CPATH`` or ``LIBRARY_PATH`` and environment module files that instead will
contain those modifications.
Autoload dependencies
"""""""""""""""""""""
The following lines in ``modules.yaml``:
.. code-block:: yaml
modules:
tcl:
all:
autoload: 'direct'
will produce environment module files that will automatically load their direct
dependencies.
.. note::
Allowed values for ``autoload`` statements
Allowed values for ``autoload`` statements are either ``none``, ``direct``
or ``all``. In ``tcl`` configuration it is possible to use the option
``prerequisites`` that accepts the same values and will add ``prereq``
statements instead of automatically loading other modules.
Blacklist or whitelist the generation of specific module files
""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""""
Sometimes it is desirable not to generate module files, a common use case being
not providing the users with software built using the system compiler.
A configuration file like:
.. code-block:: yaml
modules:
tcl:
whitelist: ['gcc', 'llvm'] # Whitelist will have precedence over blacklist
blacklist: ['%gcc@4.4.7'] # Assuming gcc@4.4.7 is the system compiler
will skip module file generation for anything that satisfies ``%gcc@4.4.7``,
with the exception of specs that satisfy ``gcc`` or ``llvm``.
Customize the naming scheme and insert conflicts
""""""""""""""""""""""""""""""""""""""""""""""""
A configuration file like:
.. code-block:: yaml
modules:
tcl:
naming_scheme: '{name}/{version}-{compiler.name}-{compiler.version}'
all:
conflict: ['{name}', 'intel/14.0.1']
will create module files that will conflict with ``intel/14.0.1`` and with the
base directory of the same module, effectively preventing the possibility to
load two or more versions of the same software at the same time.
.. note::
Tokens available for the naming scheme
currently only the tokens shown in the example are available to construct
the naming scheme
.. note::
The ``conflict`` option is ``tcl`` specific
Regenerating module files
^^^^^^^^^^^^^^^^^^^^^^^^^
Sometimes you may need to regenerate the modules files. For example,
if newer, fancier module support is added to Spack at some later date,
@ -960,7 +1230,7 @@ new features.
.. _spack-module:
``spack module refresh``
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
""""""""""""""""""""""""
Running ``spack module refresh`` will remove the
``share/spack/modules`` and ``share/spack/dotkit`` directories, then
@ -1186,6 +1456,51 @@ several variants:
spack deactivate -a python
Filesystem requirements
--------------------------
Spack currently needs to be run from a filesystem that supports
``flock`` locking semantics. Nearly all local filesystems and recent
versions of NFS support this, but parallel filesystems may be mounted
without ``flock`` support enabled. You can determine how your
filesystems are mounted with ``mount -p``. The output for a Lustre
filesystem might look like this:
.. code-block:: sh
$ mount -l | grep lscratch
pilsner-mds1-lnet0@o2ib100:/lsd on /p/lscratchd type lustre (rw,nosuid,noauto,_netdev,lazystatfs,flock)
porter-mds1-lnet0@o2ib100:/lse on /p/lscratche type lustre (rw,nosuid,noauto,_netdev,lazystatfs,flock)
Note the ``flock`` option on both Lustre mounts. If you do not see
this or a similar option for your filesystem, you may need ot ask your
system administrator to enable ``flock``.
This issue typically manifests with the error below:
.. code-block:: sh
$ ./spack find
Traceback (most recent call last):
File "./spack", line 176, in <module>
main()
File "./spack", line 154, in main
return_val = command(parser, args)
File "./spack/lib/spack/spack/cmd/find.py", line 170, in find
specs = set(spack.installed_db.query(**q_args))
File "./spack/lib/spack/spack/database.py", line 551, in query
with self.read_transaction():
File "./spack/lib/spack/spack/database.py", line 598, in __enter__
if self._enter() and self._acquire_fn:
File "./spack/lib/spack/spack/database.py", line 608, in _enter
return self._db.lock.acquire_read(self._timeout)
File "./spack/lib/spack/llnl/util/lock.py", line 103, in acquire_read
self._lock(fcntl.LOCK_SH, timeout) # can raise LockError.
File "./spack/lib/spack/llnl/util/lock.py", line 64, in _lock
fcntl.lockf(self._fd, op | fcntl.LOCK_NB)
IOError: [Errno 38] Function not implemented
A nicer error message is TBD in future versions of Spack.
Getting Help
-----------------------

2
lib/spack/docs/index.rst
View File

@ -18,7 +18,7 @@ configurations can coexist on the same system.
Most importantly, Spack is *simple*. It offers a simple *spec* syntax
so that users can specify versions and configuration options
concisely. Spack is also simple for package authors: package files
are writtin in pure Python, and specs allow package authors to
are written in pure Python, and specs allow package authors to
maintain a single file for many different builds of the same package.
See the :doc:`features` for examples and highlights.

2
lib/spack/docs/mirrors.rst
View File

@ -38,7 +38,7 @@ contains tarballs for each package, named after each package.
.. note::
Archives are **not** named exactly they were in the package's fetch
Archives are **not** named exactly the way they were in the package's fetch
URL. They have the form ``<name>-<version>.<extension>``, where
``<name>`` is Spack's name for the package, ``<version>`` is the
version of the tarball, and ``<extension>`` is whatever format the

275
lib/spack/docs/packaging_guide.rst
View File

@ -419,7 +419,7 @@ directory to the directory containing the downloaded archive before it
calls your ``install`` method. Within ``install``, the path to the
downloaded archive is available as ``self.stage.archive_file``.
Here is an example snippet for packages distribuetd as self-extracting
Here is an example snippet for packages distributed as self-extracting
archives. The example sets permissions on the downloaded file to make
it executable, then runs it with some arguments.
@ -703,6 +703,127 @@ Fetching a revision
Subversion branches are handled as part of the directory structure, so
you can check out a branch or tag by changing the ``url``.
.. _license:
Licensed software
------------------------------------------
In order to install licensed software, Spack needs to know a few more
details about a package. The following class attributes should be defined.
``license_required``
~~~~~~~~~~~~~~~~~~~~~
Boolean. If set to ``True``, this software requires a license. If set to
``False``, all of the following attributes will be ignored. Defaults to
``False``.
``license_comment``
~~~~~~~~~~~~~~~~~~~~~
String. Contains the symbol used by the license manager to denote a comment.
Defaults to ``#``.
``license_files``
~~~~~~~~~~~~~~~~~~~~~
List of strings. These are files that the software searches for when
looking for a license. All file paths must be relative to the installation
directory. More complex packages like Intel may require multiple
licenses for individual components. Defaults to the empty list.
``license_vars``
~~~~~~~~~~~~~~~~~~~~~
List of strings. Environment variables that can be set to tell the software
where to look for a license if it is not in the usual location. Defaults
to the empty list.
``license_url``
~~~~~~~~~~~~~~~~~~~~~
String. A URL pointing to license setup instructions for the software.
Defaults to the empty string.
For example, let's take a look at the package for the PGI compilers.
.. code-block:: python
# Licensing
license_required = True
license_comment = '#'
license_files = ['license.dat']
license_vars = ['PGROUPD_LICENSE_FILE', 'LM_LICENSE_FILE']
license_url = 'http://www.pgroup.com/doc/pgiinstall.pdf'
As you can see, PGI requires a license. Its license manager, FlexNet, uses
the ``#`` symbol to denote a comment. It expects the license file to be
named ``license.dat`` and to be located directly in the installation prefix.
If you would like the installation file to be located elsewhere, simply set
``PGROUPD_LICENSE_FILE`` or ``LM_LICENSE_FILE`` after installation. For
further instructions on installation and licensing, see the URL provided.
Let's walk through a sample PGI installation to see exactly what Spack is
and isn't capable of. Since PGI does not provide a download URL, it must
be downloaded manually. It can either be added to a mirror or located in
the current directory when ``spack install pgi`` is run. See :ref:`mirrors`
for instructions on setting up a mirror.
After running ``spack install pgi``, the first thing that will happen is
Spack will create a global license file located at
``$SPACK_ROOT/etc/spack/licenses/pgi/license.dat``. It will then open up the
file using the editor set in ``$EDITOR``, or vi if unset. It will look like
this:
.. code-block::
# A license is required to use pgi.
#
# The recommended solution is to store your license key in this global
# license file. After installation, the following symlink(s) will be
# added to point to this file (relative to the installation prefix):
#
# license.dat
#
# Alternatively, use one of the following environment variable(s):
#
# PGROUPD_LICENSE_FILE
# LM_LICENSE_FILE
#
# If you choose to store your license in a non-standard location, you may
# set one of these variable(s) to the full pathname to the license file, or
# port@host if you store your license keys on a dedicated license server.
# You will likely want to set this variable in a module file so that it
# gets loaded every time someone tries to use pgi.
#
# For further information on how to acquire a license, please refer to:
#
# http://www.pgroup.com/doc/pgiinstall.pdf
#
# You may enter your license below.
You can add your license directly to this file, or tell FlexNet to use a
license stored on a separate license server. Here is an example that
points to a license server called licman1:
.. code-block::
SERVER licman1.mcs.anl.gov 00163eb7fba5 27200
USE_SERVER
If your package requires the license to install, you can reference the
location of this global license using ``self.global_license_file``.
After installation, symlinks for all of the files given in
``license_files`` will be created, pointing to this global license.
If you install a different version or variant of the package, Spack
will automatically detect and reuse the already existing global license.
If the software you are trying to package doesn't rely on license files,
Spack will print a warning message, letting the user know that they
need to set an environment variable or pointing them to installation
documentation.
.. _patching:
Patches
@ -1556,14 +1677,14 @@ you ask for a particular spec.
``Concretization Policies``
~~~~~~~~~~~~~~~~~~~~~~~~~~~
A user may have certain perferrences for how packages should
A user may have certain preferences for how packages should
be concretized on their system. For example, one user may prefer packages
built with OpenMPI and the Intel compiler. Another user may prefer
packages be built with MVAPICH and GCC.
packages be built with MVAPICH and GCC.
Spack can be configurated to prefer certain compilers, package
Spack can be configured to prefer certain compilers, package
versions, depends_on, and variants during concretization.
The preferred configuration can be controlled via the
The preferred configuration can be controlled via the
``~/.spack/packages.yaml`` file for user configuations, or the
``etc/spack/packages.yaml`` site configuration.
@ -1582,32 +1703,32 @@ Here's an example packages.yaml file that sets preferred packages:
compiler: [gcc@4.4.7, gcc@4.6:, intel, clang, pgi]
providers:
mpi: [mvapich, mpich, openmpi]
At a high level, this example is specifying how packages should be
concretized. The dyninst package should prefer using gcc 4.9 and
concretized. The dyninst package should prefer using gcc 4.9 and
be built with debug options. The gperftools package should prefer version
2.2 over 2.4. Every package on the system should prefer mvapich for
its MPI and gcc 4.4.7 (except for Dyninst, which overrides this by perfering gcc 4.9).
These options are used to fill in implicit defaults. Any of them can be overwritten
its MPI and gcc 4.4.7 (except for Dyninst, which overrides this by preferring gcc 4.9).
These options are used to fill in implicit defaults. Any of them can be overwritten
on the command line if explicitly requested.
Each packages.yaml file begin with the string ``packages:`` and
Each packages.yaml file begins with the string ``packages:`` and
package names are specified on the next level. The special string ``all``
applies settings to each package. Underneath each package name is
one or more components: ``compiler``, ``variants``, ``version``,
or ``providers``. Each component has an ordered list of spec
``constraints``, with earlier entries in the list being prefered over
applies settings to each package. Underneath each package name is
one or more components: ``compiler``, ``variants``, ``version``,
or ``providers``. Each component has an ordered list of spec
``constraints``, with earlier entries in the list being preferred over
later entries.
Sometimes a package installation may have constraints that forbid
Sometimes a package installation may have constraints that forbid
the first concretization rule, in which case Spack will use the first
legal concretization rule. Going back to the example, if a user
requests gperftools 2.3 or later, then Spack will install version 2.4
requests gperftools 2.3 or later, then Spack will install version 2.4
as the 2.4 version of gperftools is preferred over 2.3.
An explicit concretization rule in the preferred section will always
take preference over unlisted concretizations. In the above example,
An explicit concretization rule in the preferred section will always
take preference over unlisted concretizations. In the above example,
xlc isn't listed in the compiler list. Every listed compiler from
gcc to pgi will thus be preferred over the xlc compiler.
@ -1803,15 +1924,15 @@ Compile-time library search paths
* ``-L$dep_prefix/lib``
* ``-L$dep_prefix/lib64``
Runtime library search paths (RPATHs)
* ``-Wl,-rpath,$dep_prefix/lib``
* ``-Wl,-rpath,$dep_prefix/lib64``
* ``$rpath_flag$dep_prefix/lib``
* ``$rpath_flag$dep_prefix/lib64``
Include search paths
* ``-I$dep_prefix/include``
An example of this would be the ``libdwarf`` build, which has one
dependency: ``libelf``. Every call to ``cc`` in the ``libdwarf``
build will have ``-I$LIBELF_PREFIX/include``,
``-L$LIBELF_PREFIX/lib``, and ``-Wl,-rpath,$LIBELF_PREFIX/lib``
``-L$LIBELF_PREFIX/lib``, and ``$rpath_flag$LIBELF_PREFIX/lib``
inserted on the command line. This is done transparently to the
project's build system, which will just think it's using a system
where ``libelf`` is readily available. Because of this, you **do
@ -1831,6 +1952,48 @@ successfully find ``libdwarf.h`` and ``libdwarf.so``, without the
packager having to provide ``--with-libdwarf=/path/to/libdwarf`` on
the command line.
.. note::
For most compilers, ``$rpath_flag`` is ``-Wl,-rpath,``. However, NAG
passes its flags to GCC instead of passing them directly to the linker.
Therefore, its ``$rpath_flag`` is doubly wrapped: ``-Wl,-Wl,,-rpath,``.
``$rpath_flag`` can be overriden on a compiler specific basis in
``lib/spack/spack/compilers/$compiler.py``.
Compiler flags
~~~~~~~~~~~~~~
In rare circumstances such as compiling and running small unit tests, a package
developer may need to know what are the appropriate compiler flags to enable
features like ``OpenMP``, ``c++11``, ``c++14`` and alike. To that end the
compiler classes in ``spack`` implement the following _properties_ :
``openmp_flag``, ``cxx11_flag``, ``cxx14_flag``, which can be accessed in a
package by ``self.compiler.cxx11_flag`` and alike. Note that the implementation
is such that if a given compiler version does not support this feature, an
error will be produced. Therefore package developers can also use these properties
to assert that a compiler supports the requested feature. This is handy when a
package supports additional variants like
.. code-block:: python
variant('openmp', default=True, description="Enable OpenMP support.")
Message Parsing Interface (MPI)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
It is common for high performance computing software/packages to use ``MPI``.
As a result of conretization, a given package can be built using different
implementations of MPI such as ``Openmpi``, ``MPICH`` or ``IntelMPI``.
In some scenarios to configure a package one have to provide it with appropriate MPI
compiler wrappers such as ``mpicc``, ``mpic++``.
However different implementations of ``MPI`` may have different names for those
wrappers. In order to make package's ``install()`` method indifferent to the
choice ``MPI`` implementation, each package which implements ``MPI`` sets up
``self.spec.mpicc``, ``self.spec.mpicxx``, ``self.spec.mpifc`` and ``self.spec.mpif77``
to point to ``C``, ``C++``, ``Fortran 90`` and ``Fortran 77`` ``MPI`` wrappers.
Package developers are advised to use these variables, for example ``self.spec['mpi'].mpicc``
instead of hard-coding ``join_path(self.spec['mpi'].prefix.bin, 'mpicc')`` for
the reasons outlined above.
Forking ``install()``
~~~~~~~~~~~~~~~~~~~~~
@ -1844,6 +2007,20 @@ dedicated process.
.. _prefix-objects:
Failing the build
----------------------
Sometimes you don't want a package to successfully install unless some
condition is true. You can explicitly cause the build to fail from
``install()`` by raising an ``InstallError``, for example:
.. code-block:: python
if spec.architecture.startswith('darwin'):
raise InstallError('This package does not build on Mac OS X!')
Prefix objects
----------------------
@ -2160,6 +2337,62 @@ package, this allows us to avoid race conditions in the library's
build system.
.. _sanity-checks:
Sanity checking an intallation
--------------------------------
By default, Spack assumes that a build has failed if nothing is
written to the install prefix, and that it has succeeded if anything
(a file, a directory, etc.) is written to the install prefix after
``install()`` completes.
Consider a simple autotools build like this:
.. code-block:: python
def install(self, spec, prefix):
configure("--prefix=" + prefix)
make()
make("install")
If you are using using standard autotools or CMake, ``configure`` and
``make`` will not write anything to the install prefix. Only ``make
install`` writes the files, and only once the build is already
complete. Not all builds are like this. Many builds of scientific
software modify the install prefix *before* ``make install``. Builds
like this can falsely report that they were successfully installed if
an error occurs before the install is complete but after files have
been written to the ``prefix``.
``sanity_check_is_file`` and ``sanity_check_is_dir``
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
You can optionally specify *sanity checks* to deal with this problem.
Add properties like this to your package:
.. code-block:: python
class MyPackage(Package):
...
sanity_check_is_file = ['include/libelf.h']
sanity_check_is_dir = [lib]
def install(self, spec, prefix):
configure("--prefix=" + prefix)
make()
make("install")
Now, after ``install()`` runs, Spack will check whether
``$prefix/include/libelf.h`` exists and is a file, and whether
``$prefix/lib`` exists and is a directory. If the checks fail, then
the build will fail and the install prefix will be removed. If they
succeed, Spack considers the build succeeful and keeps the prefix in
place.
.. _file-manipulation:
File manipulation functions

25
lib/spack/docs/site_configuration.rst
View File

@ -56,7 +56,7 @@ directory is.
External Packages
~~~~~~~~~~~~~~~~~~~~~
Spack can be configured to use externally-installed
Spack can be configured to use externally-installed
packages rather than building its own packages. This may be desirable
if machines ship with system packages, such as a customized MPI
that should be used instead of Spack building its own MPI.
@ -76,21 +76,20 @@ directory. Here's an example of an external configuration:
This example lists three installations of OpenMPI, one built with gcc,
one built with gcc and debug information, and another built with Intel.
If Spack is asked to build a package that uses one of these MPIs as a
If Spack is asked to build a package that uses one of these MPIs as a
dependency, it will use the the pre-installed OpenMPI in
the given directory. This example also specifies that Spack should never
build its own OpenMPI via the ``nobuild: True`` option.
the given directory.
Each ``packages.yaml`` begins with a ``packages:`` token, followed
by a list of package names. To specify externals, add a ``paths``
token under the package name, which lists externals in a
``spec : /path`` format. Each spec should be as
well-defined as reasonably possible. If a
package lacks a spec component, such as missing a compiler or
package version, then Spack will guess the missing component based
well-defined as reasonably possible. If a
package lacks a spec component, such as missing a compiler or
package version, then Spack will guess the missing component based
on its most-favored packages, and it may guess incorrectly.
Each package version and compilers listed in an external should
Each package version and compilers listed in an external should
have entries in Spack's packages and compiler configuration, even
though the package and compiler may not every be built.
@ -112,17 +111,17 @@ be:
openmpi@1.4.3%gcc@4.4.7=chaos_5_x86_64_ib: /opt/openmpi-1.4.3
openmpi@1.4.3%gcc@4.4.7=chaos_5_x86_64_ib+debug: /opt/openmpi-1.4.3-debug
openmpi@1.6.5%intel@10.1=chaos_5_x86_64_ib: /opt/openmpi-1.6.5-intel
nobuild: True
buildable: False
The addition of the ``nobuild`` flag tells Spack that it should never build
The addition of the ``buildable`` flag tells Spack that it should never build
its own version of OpenMPI, and it will instead always rely on a pre-built
OpenMPI. Similar to ``paths``, ``nobuild`` is specified as a property under
OpenMPI. Similar to ``paths``, ``buildable`` is specified as a property under
a package name.
The ``nobuild`` does not need to be paired with external packages.
The ``buildable`` does not need to be paired with external packages.
It could also be used alone to forbid packages that may be
buggy or otherwise undesirable.
Profiling
~~~~~~~~~~~~~~~~~~~~~

383
lib/spack/env/cc vendored
View File

@ -1,27 +1,27 @@
#!/bin/bash
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
#
# Spack compiler wrapper script.
@ -38,19 +38,27 @@
# -Wl,-rpath arguments for dependency /lib directories.
#
# This is the list of environment variables that need to be set before
# the script runs. They are set by routines in spack.build_environment
# This is an array of environment variables that need to be set before
# the script runs. They are set by routines in spack.build_environment
# as part of spack.package.Package.do_install().
parameters="
SPACK_PREFIX
SPACK_ENV_PATH
SPACK_DEBUG_LOG_DIR
SPACK_COMPILER_SPEC
SPACK_SHORT_SPEC"
parameters=(
SPACK_PREFIX
SPACK_ENV_PATH
SPACK_DEBUG_LOG_DIR
SPACK_COMPILER_SPEC
SPACK_CC_RPATH_ARG
SPACK_CXX_RPATH_ARG
SPACK_F77_RPATH_ARG
SPACK_FC_RPATH_ARG
SPACK_SHORT_SPEC
)
# The compiler input variables are checked for sanity later:
# SPACK_CC, SPACK_CXX, SPACK_F77, SPACK_FC
# Debug flag is optional; set to true for debug logging:
# The default compiler flags are passed from these variables:
# SPACK_CFLAGS, SPACK_CXXFLAGS, SPACK_FCFLAGS, SPACK_FFLAGS,
# SPACK_LDFLAGS, SPACK_LDLIBS
# Debug env var is optional; set to true for debug logging:
# SPACK_DEBUG
# Test command is used to unit test the compiler script.
# SPACK_TEST_COMMAND
@ -64,13 +72,12 @@ function die {
exit 1
}
for param in $parameters; do
if [ -z "${!param}" ]; then
die "Spack compiler must be run from spack! Input $param was missing!"
for param in ${parameters[@]}; do
if [[ -z ${!param} ]]; then
die "Spack compiler must be run from Spack! Input '$param' is missing."
fi
done
#
# Figure out the type of compiler, the language, and the mode so that
# the compiler script knows what to do.
#
@ -78,32 +85,42 @@ done
# 'command' is set based on the input command to $SPACK_[CC|CXX|F77|F90]
#
# 'mode' is set to one of:
# vcheck version check
# cpp preprocess
# cc compile
# as assemble
# ld link
# ccld compile & link
# cpp preprocessor
# vcheck version check
#
command=$(basename "$0")
comp="CC"
case "$command" in
cpp)
mode=cpp
;;
cc|c89|c99|gcc|clang|icc|pgcc|xlc)
command="$SPACK_CC"
language="C"
comp="CC"
lang_flags=C
;;
c++|CC|g++|clang++|icpc|pgc++|xlc++)
command="$SPACK_CXX"
language="C++"
comp="CXX"
lang_flags=CXX
;;
f90|fc|f95|gfortran|ifort|pgfortran|xlf90|nagfor)
command="$SPACK_FC"
language="Fortran 90"
comp="FC"
lang_flags=F
;;
f77|gfortran|ifort|pgfortran|xlf|nagfor)
command="$SPACK_F77"
language="Fortran 77"
;;
cpp)
mode=cpp
comp="F77"
lang_flags=F
;;
ld)
mode=ld
@ -113,226 +130,155 @@ case "$command" in
;;
esac
# If any of the arguments below is present then the mode is vcheck. In vcheck mode nothing is added in terms of extra search paths or libraries
if [ -z "$mode" ]; then
# If any of the arguments below are present, then the mode is vcheck.
# In vcheck mode, nothing is added in terms of extra search paths or
# libraries.
if [[ -z $mode ]]; then
for arg in "$@"; do
if [ "$arg" = -v -o "$arg" = -V -o "$arg" = --version -o "$arg" = -dumpversion ]; then
if [[ $arg == -v || $arg == -V || $arg == --version || $arg == -dumpversion ]]; then
mode=vcheck
break
fi
fi
done
fi
# Finish setting up the mode.
if [ -z "$mode" ]; then
if [[ -z $mode ]]; then
mode=ccld
for arg in "$@"; do
if [ "$arg" = -E ]; then
if [[ $arg == -E ]]; then
mode=cpp
break
elif [ "$arg" = -c ]; then
elif [[ $arg == -S ]]; then
mode=as
break
elif [[ $arg == -c ]]; then
mode=cc
break
fi
done
fi
# Set up rpath variable according to language.
eval rpath=\$SPACK_${comp}_RPATH_ARG
# Dump the version and exit if we're in testing mode.
if [ "$SPACK_TEST_COMMAND" = "dump-mode" ]; then
if [[ $SPACK_TEST_COMMAND == dump-mode ]]; then
echo "$mode"
exit
fi
# Check that at least one of the real commands was actually selected,
# otherwise we don't know what to execute.
if [ -z "$command" ]; then
if [[ -z $command ]]; then
die "ERROR: Compiler '$SPACK_COMPILER_SPEC' does not support compiling $language programs."
fi
if [[ $mode == vcheck ]]; then
exec ${command} "$@"
fi
# Darwin's linker has a -r argument that merges object files together.
# It doesn't work with -rpath.
# This variable controls whether they are added.
add_rpaths=true
if [[ $mode == ld && "$SPACK_SHORT_SPEC" =~ "darwin" ]]; then
for arg in "$@"; do
if [[ $arg == -r ]]; then
add_rpaths=false
break
fi
done
fi
# Save original command for debug logging
input_command="$@"
args=("$@")
#
# Filter '.' and Spack environment directories out of PATH so that
# this script doesn't just call itself
#
IFS=':' read -ra env_path <<< "$PATH"
IFS=':' read -ra spack_env_dirs <<< "$SPACK_ENV_PATH"
spack_env_dirs+=(".")
PATH=""
for dir in "${env_path[@]}"; do
remove=""
for rm_dir in "${spack_env_dirs[@]}"; do
if [ "$dir" = "$rm_dir" ]; then remove=True; fi
done
if [ -z "$remove" ]; then
if [ -z "$PATH" ]; then
PATH="$dir"
else
PATH="$PATH:$dir"
fi
fi
done
export PATH
# Prepend cppflags, cflags, cxxflags, fcflags, fflags, and ldflags
if [ "$mode" == vcheck ] ; then
exec ${command} "$@"
fi
# Add ldflags
case "$mode" in
ld|ccld)
args=(${SPACK_LDFLAGS[@]} "${args[@]}") ;;
esac
#
# Now do real parsing of the command line args, trying hard to keep
# non-rpath linker arguments in the proper order w.r.t. other command
# line arguments. This is important for things like groups.
#
includes=()
libraries=()
libs=()
rpaths=()
other_args=()
# Add compiler flags.
case "$mode" in
cc|ccld)
# Add c, cxx, fc, and f flags
case $lang_flags in
C)
args=(${SPACK_CFLAGS[@]} "${args[@]}") ;;
CXX)
args=(${SPACK_CXXFLAGS[@]} "${args[@]}") ;;
esac
;;
esac
while [ -n "$1" ]; do
case "$1" in
-I*)
arg="${1#-I}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
includes+=("$arg")
;;
-L*)
arg="${1#-L}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
libraries+=("$arg")
;;
-l*)
arg="${1#-l}"
if [ -z "$arg" ]; then shift; arg="$1"; fi
libs+=("$arg")
;;
-Wl,*)
arg="${1#-Wl,}"
# TODO: Handle multiple -Wl, continuations of -Wl,-rpath
if [[ $arg == -rpath=* ]]; then
arg="${arg#-rpath=}"
for rpath in ${arg//,/ }; do
rpaths+=("$rpath")
done
elif [[ $arg == -rpath,* ]]; then
arg="${arg#-rpath,}"
for rpath in ${arg//,/ }; do
rpaths+=("$rpath")
done
elif [[ $arg == -rpath ]]; then
shift; arg="$1"
if [[ $arg != '-Wl,'* ]]; then
die "-Wl,-rpath was not followed by -Wl,*"
fi
arg="${arg#-Wl,}"
for rpath in ${arg//,/ }; do
rpaths+=("$rpath")
done
else
other_args+=("-Wl,$arg")
fi
;;
-Xlinker)
shift; arg="$1";
if [[ $arg = -rpath=* ]]; then
rpaths+=("${arg#-rpath=}")
elif [[ $arg = -rpath ]]; then
shift; arg="$1"
if [[ $arg != -Xlinker ]]; then
die "-Xlinker -rpath was not followed by -Xlinker <arg>"
fi
shift; arg="$1"
rpaths+=("$arg")
else
other_args+=("-Xlinker")
other_args+=("$arg")
fi
;;
*)
other_args+=("$1")
;;
esac
shift
done
# Add cppflags
case "$mode" in
cpp|as|cc|ccld)
args=(${SPACK_CPPFLAGS[@]} "${args[@]}") ;;
esac
# Dump parsed values for unit testing if asked for
if [ -n "$SPACK_TEST_COMMAND" ]; then
IFS=$'\n'
case "$SPACK_TEST_COMMAND" in
dump-includes) echo "${includes[*]}";;
dump-libraries) echo "${libraries[*]}";;
dump-libs) echo "${libs[*]}";;
dump-rpaths) echo "${rpaths[*]}";;
dump-other-args) echo "${other_args[*]}";;
dump-all)
echo "INCLUDES:"
echo "${includes[*]}"
echo
echo "LIBRARIES:"
echo "${libraries[*]}"
echo
echo "LIBS:"
echo "${libs[*]}"
echo
echo "RPATHS:"
echo "${rpaths[*]}"
echo
echo "ARGS:"
echo "${other_args[*]}"
;;
*)
echo "ERROR: Unknown test command"
exit 1 ;;
esac
exit
fi
case "$mode" in cc|ccld)
# Add fortran flags
case $lang_flags in
F)
args=(${SPACK_FFLAGS[@]} "${args[@]}") ;;
esac
;;
esac
# Read spack dependencies from the path environment variable
IFS=':' read -ra deps <<< "$SPACK_DEPENDENCIES"
for dep in "${deps[@]}"; do
if [ -d "$dep/include" ]; then
includes+=("$dep/include")
# Prepend include directories
if [[ -d $dep/include ]]; then
if [[ $mode == cpp || $mode == cc || $mode == as || $mode == ccld ]]; then
args=("-I$dep/include" "${args[@]}")
fi
fi
if [ -d "$dep/lib" ]; then
libraries+=("$dep/lib")
rpaths+=("$dep/lib")
# Prepend lib and RPATH directories
if [[ -d $dep/lib ]]; then
if [[ $mode == ccld ]]; then
$add_rpaths && args=("$rpath$dep/lib" "${args[@]}")
args=("-L$dep/lib" "${args[@]}")
elif [[ $mode == ld ]]; then
$add_rpaths && args=("-rpath" "$dep/lib" "${args[@]}")
args=("-L$dep/lib" "${args[@]}")
fi
fi
if [ -d "$dep/lib64" ]; then
libraries+=("$dep/lib64")
rpaths+=("$dep/lib64")
# Prepend lib64 and RPATH directories
if [[ -d $dep/lib64 ]]; then
if [[ $mode == ccld ]]; then
$add_rpaths && args=("$rpath$dep/lib64" "${args[@]}")
args=("-L$dep/lib64" "${args[@]}")
elif [[ $mode == ld ]]; then
$add_rpaths && args=("-rpath" "$dep/lib64" "${args[@]}")
args=("-L$dep/lib64" "${args[@]}")
fi
fi
done
# Include all -L's and prefix/whatever dirs in rpath
for dir in "${libraries[@]}"; do
[[ dir = $SPACK_INSTALL* ]] && rpaths+=("$dir")
done
rpaths+=("$SPACK_PREFIX/lib")
rpaths+=("$SPACK_PREFIX/lib64")
# Put the arguments together
args=()
for dir in "${includes[@]}"; do args+=("-I$dir"); done
args+=("${other_args[@]}")
for dir in "${libraries[@]}"; do args+=("-L$dir"); done
for lib in "${libs[@]}"; do args+=("-l$lib"); done
if [ "$mode" = ccld ]; then
for dir in "${rpaths[@]}"; do
args+=("-Wl,-rpath")
args+=("-Wl,$dir");
done
elif [ "$mode" = ld ]; then
for dir in "${rpaths[@]}"; do
args+=("-rpath")
args+=("$dir");
done
if [[ $mode == ccld ]]; then
$add_rpaths && args=("$rpath$SPACK_PREFIX/lib64" "${args[@]}")
$add_rpaths && args=("$rpath$SPACK_PREFIX/lib" "${args[@]}")
elif [[ $mode == ld ]]; then
$add_rpaths && args=("-rpath" "$SPACK_PREFIX/lib64" "${args[@]}")
$add_rpaths && args=("-rpath" "$SPACK_PREFIX/lib" "${args[@]}")
fi
# Add SPACK_LDLIBS to args
case "$mode" in
ld|ccld)
args=("${args[@]}" ${SPACK_LDLIBS[@]}) ;;
esac
#
# Unset pesky environment variables that could affect build sanity.
#
@ -340,17 +286,46 @@ unset LD_LIBRARY_PATH
unset LD_RUN_PATH
unset DYLD_LIBRARY_PATH
full_command=("$command")
full_command+=("${args[@]}")
#
# Filter '.' and Spack environment directories out of PATH so that
# this script doesn't just call itself
#
IFS=':' read -ra env_path <<< "$PATH"
IFS=':' read -ra spack_env_dirs <<< "$SPACK_ENV_PATH"
spack_env_dirs+=("" ".")
PATH=""
for dir in "${env_path[@]}"; do
addpath=true
for env_dir in "${spack_env_dirs[@]}"; do
if [[ $dir == $env_dir ]]; then
addpath=false
break
fi
done
if $addpath; then
PATH="${PATH:+$PATH:}$dir"
fi
done
export PATH
full_command=("$command" "${args[@]}")
# In test command mode, write out full command for Spack tests.
if [[ $SPACK_TEST_COMMAND == dump-args ]]; then
echo "${full_command[@]}"
exit
elif [[ -n $SPACK_TEST_COMMAND ]]; then
die "ERROR: Unknown test command"
fi
#
# Write the input and output commands to debug logs if it's asked for.
#
if [ "$SPACK_DEBUG" = "TRUE" ]; then
if [[ $SPACK_DEBUG == TRUE ]]; then
input_log="$SPACK_DEBUG_LOG_DIR/spack-cc-$SPACK_SHORT_SPEC.in.log"
output_log="$SPACK_DEBUG_LOG_DIR/spack-cc-$SPACK_SHORT_SPEC.out.log"
echo "$input_command" >> $input_log
echo "$mode ${full_command[@]}" >> $output_log
echo "[$mode] $command $input_command" >> $input_log
echo "[$mode] ${full_command[@]}" >> $output_log
fi
exec "${full_command[@]}"

22
lib/spack/external/nose/LICENSE vendored
View File

@ -55,7 +55,7 @@ modified by someone else and passed on, the recipients should know
that what they have is not the original version, so that the original
author's reputation will not be affected by problems that might be
introduced by others.
Finally, software patents pose a constant threat to the existence of
any free program. We wish to make sure that a company cannot
effectively restrict the users of a free program by obtaining a
@ -111,7 +111,7 @@ modification follow. Pay close attention to the difference between a
"work based on the library" and a "work that uses the library". The
former contains code derived from the library, whereas the latter must
be combined with the library in order to run.
GNU LESSER GENERAL PUBLIC LICENSE
TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
@ -146,7 +146,7 @@ such a program is covered only if its contents constitute a work based
on the Library (independent of the use of the Library in a tool for
writing it). Whether that is true depends on what the Library does
and what the program that uses the Library does.
1. You may copy and distribute verbatim copies of the Library's
complete source code as you receive it, in any medium, provided that
you conspicuously and appropriately publish on each copy an
@ -158,7 +158,7 @@ Library.
You may charge a fee for the physical act of transferring a copy,
and you may at your option offer warranty protection in exchange for a
fee.
2. You may modify your copy or copies of the Library or any portion
of it, thus forming a work based on the Library, and copy and
distribute such modifications or work under the terms of Section 1
@ -216,7 +216,7 @@ instead of to this License. (If a newer version than version 2 of the
ordinary GNU General Public License has appeared, then you can specify
that version instead if you wish.) Do not make any other change in
these notices.
Once this change is made in a given copy, it is irreversible for
that copy, so the ordinary GNU General Public License applies to all
subsequent copies and derivative works made from that copy.
@ -267,7 +267,7 @@ Library will still fall under Section 6.)
distribute the object code for the work under the terms of Section 6.
Any executables containing that work also fall under Section 6,
whether or not they are linked directly with the Library itself.
6. As an exception to the Sections above, you may also combine or
link a "work that uses the Library" with the Library to produce a
work containing portions of the Library, and distribute that work
@ -329,7 +329,7 @@ restrictions of other proprietary libraries that do not normally
accompany the operating system. Such a contradiction means you cannot
use both them and the Library together in an executable that you
distribute.
7. You may place library facilities that are a work based on the
Library side-by-side in a single library together with other library
facilities not covered by this License, and distribute such a combined
@ -370,7 +370,7 @@ subject to these terms and conditions. You may not impose any further
restrictions on the recipients' exercise of the rights granted herein.
You are not responsible for enforcing compliance by third parties with
this License.
11. If, as a consequence of a court judgment or allegation of patent
infringement or for any other reason (not limited to patent issues),
conditions are imposed on you (whether by court order, agreement or
@ -422,7 +422,7 @@ conditions either of that version or of any later version published by
the Free Software Foundation. If the Library does not specify a
license version number, you may choose any version ever published by
the Free Software Foundation.
14. If you wish to incorporate parts of the Library into other free
programs whose distribution conditions are incompatible with these,
write to the author to ask for permission. For software which is
@ -456,7 +456,7 @@ SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH
DAMAGES.
END OF TERMS AND CONDITIONS
How to Apply These Terms to Your New Libraries
If you develop a new library, and you want it to be of the greatest
@ -500,5 +500,3 @@ necessary. Here is a sample; alter the names:
Ty Coon, President of Vice
That's all there is to it!

24
lib/spack/llnl/__init__.py
View File

@ -0,0 +1,24 @@
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################

24
lib/spack/llnl/util/__init__.py
View File

@ -0,0 +1,24 @@
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################

62
lib/spack/llnl/util/filesystem.py
View File

@ -1,35 +1,37 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
__all__ = ['set_install_permissions', 'install', 'install_tree', 'traverse_tree',
'expand_user', 'working_dir', 'touch', 'touchp', 'mkdirp',
'force_remove', 'join_path', 'ancestor', 'can_access', 'filter_file',
'FileFilter', 'change_sed_delimiter', 'is_exe', 'force_symlink',
'set_executable', 'copy_mode', 'unset_executable_mode',
'remove_dead_links', 'remove_linked_tree']
'remove_dead_links', 'remove_linked_tree', 'find_library_path',
'fix_darwin_install_name']
import os
import glob
import sys
import re
import shutil
@ -38,6 +40,7 @@
import getpass
from contextlib import contextmanager, closing
from tempfile import NamedTemporaryFile
import subprocess
import llnl.util.tty as tty
from spack.util.compression import ALLOWED_ARCHIVE_TYPES
@ -392,3 +395,44 @@ def remove_linked_tree(path):
os.unlink(path)
else:
shutil.rmtree(path, True)
def fix_darwin_install_name(path):
"""
Fix install name of dynamic libraries on Darwin to have full path.
There are two parts of this task:
(i) use install_name('-id',...) to change install name of a single lib;
(ii) use install_name('-change',...) to change the cross linking between libs.
The function assumes that all libraries are in one folder and currently won't
follow subfolders.
Args:
path: directory in which .dylib files are alocated
"""
libs = glob.glob(join_path(path,"*.dylib"))
for lib in libs:
# fix install name first:
subprocess.Popen(["install_name_tool", "-id",lib,lib], stdout=subprocess.PIPE).communicate()[0]
long_deps = subprocess.Popen(["otool", "-L",lib], stdout=subprocess.PIPE).communicate()[0].split('\n')
deps = [dep.partition(' ')[0][1::] for dep in long_deps[2:-1]]
# fix all dependencies:
for dep in deps:
for loc in libs:
if dep == os.path.basename(loc):
subprocess.Popen(["install_name_tool", "-change",dep,loc,lib], stdout=subprocess.PIPE).communicate()[0]
break
def find_library_path(libname, *paths):
"""Searches for a file called <libname> in each path.
Return:
directory where the library was found, if found. None otherwise.
"""
for path in paths:
library = join_path(path, libname)
if os.path.exists(library):
return path
return None

26
lib/spack/llnl/util/lang.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import re
@ -117,7 +117,8 @@ def caller_locals():
scope. Yes, this is some black magic, and yes it's useful
for implementing things like depends_on and provides.
"""
stack = inspect.stack()
# Passing zero here skips line context for speed.
stack = inspect.stack(0)
try:
return stack[2][0].f_locals
finally:
@ -128,7 +129,8 @@ def get_calling_module_name():
"""Make sure that the caller is a class definition, and return the
enclosing module's name.
"""
stack = inspect.stack()
# Passing zero here skips line context for speed.
stack = inspect.stack(0)
try:
# Make sure locals contain __module__
caller_locals = stack[2][0].f_locals
@ -235,11 +237,11 @@ def setter(name, value):
if not has_method(cls, '_cmp_key'):
raise TypeError("'%s' doesn't define _cmp_key()." % cls.__name__)
setter('__eq__', lambda s,o: o is not None and s._cmp_key() == o._cmp_key())
setter('__eq__', lambda s,o: (s is o) or (o is not None and s._cmp_key() == o._cmp_key()))
setter('__lt__', lambda s,o: o is not None and s._cmp_key() < o._cmp_key())
setter('__le__', lambda s,o: o is not None and s._cmp_key() <= o._cmp_key())
setter('__ne__', lambda s,o: o is None or s._cmp_key() != o._cmp_key())
setter('__ne__', lambda s,o: (s is not o) and (o is None or s._cmp_key() != o._cmp_key()))
setter('__gt__', lambda s,o: o is None or s._cmp_key() > o._cmp_key())
setter('__ge__', lambda s,o: o is None or s._cmp_key() >= o._cmp_key())

16
lib/spack/llnl/util/link_tree.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""LinkTree class for setting up trees of symbolic links."""
__all__ = ['LinkTree']

16
lib/spack/llnl/util/lock.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013-2015, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import fcntl

16
lib/spack/llnl/util/tty/__init__.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
import os

16
lib/spack/llnl/util/tty/colify.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""
Routines for printing columnar output. See colify() for more information.

16
lib/spack/llnl/util/tty/color.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""
This file implements an expression syntax, similar to printf, for adding

16
lib/spack/llnl/util/tty/log.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013-2015, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""Utility classes for logging the output of blocks of code.
"""

29
lib/spack/spack/__init__.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import sys
@ -107,7 +107,7 @@
# Version information
from spack.version import Version
spack_version = Version("0.8.15")
spack_version = Version("0.9")
#
# Executables used by Spack
@ -138,9 +138,7 @@
# don't add a second username if it's already unique by user.
if not _tmp_user in path:
tmp_dirs.append(join_path(path, '%u', 'spack-stage'))
for path in _tmp_candidates:
if not path in tmp_dirs:
else:
tmp_dirs.append(join_path(path, 'spack-stage'))
# Whether spack should allow installation of unsafe versions of
@ -190,3 +188,10 @@
import spack.util.executable
from spack.util.executable import *
__all__ += spack.util.executable.__all__
from spack.package import \
install_dependency_symlinks, flatten_dependencies, DependencyConflictError, \
InstallError, ExternalPackageError
__all__ += [
'install_dependency_symlinks', 'flatten_dependencies', 'DependencyConflictError',
'InstallError', 'ExternalPackageError']

18
lib/spack/spack/abi.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2015, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://scalability-llnl.github.io/spack
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os

16
lib/spack/spack/architecture.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
from collections import namedtuple

226
lib/spack/spack/build_environment.py
View File

@ -1,9 +1,33 @@
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""
This module contains all routines related to setting up the package
build environment. All of this is set up by package.py just before
install() is called.
There are two parts to the bulid environment:
There are two parts to the build environment:
1. Python build environment (i.e. install() method)
@ -13,7 +37,7 @@
the package's module scope. Ths allows package writers to call
them all directly in Package.install() without writing 'self.'
everywhere. No, this isn't Pythonic. Yes, it makes the code more
readable and more like the shell script from whcih someone is
readable and more like the shell script from which someone is
likely porting.
2. Build execution environment
@ -32,12 +56,14 @@
import shutil
import multiprocessing
import platform
import llnl.util.tty as tty
from llnl.util.filesystem import *
import spack
import spack.compilers as compilers
from spack.util.executable import Executable, which
from spack.environment import EnvironmentModifications, validate
from spack.util.environment import *
from spack.util.executable import Executable, which
#
# This can be set by the user to globally disable parallel builds.
@ -58,6 +84,11 @@
SPACK_DEBUG_LOG_DIR = 'SPACK_DEBUG_LOG_DIR'
# Platform-specific library suffix.
dso_suffix = 'dylib' if sys.platform == 'darwin' else 'so'
class MakeExecutable(Executable):
"""Special callable executable object for make so the user can
specify parallel or not on a per-invocation basis. Using
@ -146,99 +177,125 @@ def get_path_from_module(mod):
def set_compiler_environment_variables(pkg):
assert(pkg.spec.concrete)
compiler = pkg.compiler
flags = pkg.spec.compiler_flags
# Set compiler variables used by CMake and autotools
assert all(key in pkg.compiler.link_paths
for key in ('cc', 'cxx', 'f77', 'fc'))
assert all(key in compiler.link_paths for key in ('cc', 'cxx', 'f77', 'fc'))
# Populate an object with the list of environment modifications
# and return it
# TODO : add additional kwargs for better diagnostics, like requestor, ttyout, ttyerr, etc.
link_dir = spack.build_env_path
os.environ['CC'] = join_path(link_dir, pkg.compiler.link_paths['cc'])
os.environ['CXX'] = join_path(link_dir, pkg.compiler.link_paths['cxx'])
os.environ['F77'] = join_path(link_dir, pkg.compiler.link_paths['f77'])
os.environ['FC'] = join_path(link_dir, pkg.compiler.link_paths['fc'])
env.set('CC', join_path(link_dir, compiler.link_paths['cc']))
env.set('CXX', join_path(link_dir, compiler.link_paths['cxx']))
env.set('F77', join_path(link_dir, compiler.link_paths['f77']))
env.set('FC', join_path(link_dir, compiler.link_paths['fc']))
# Set SPACK compiler variables so that our wrapper knows what to call
if compiler.cc:
os.environ['SPACK_CC'] = compiler.cc
env.set('SPACK_CC', compiler.cc)
if compiler.cxx:
os.environ['SPACK_CXX'] = compiler.cxx
env.set('SPACK_CXX', compiler.cxx)
if compiler.f77:
os.environ['SPACK_F77'] = compiler.f77
env.set('SPACK_F77', compiler.f77)
if compiler.fc:
os.environ['SPACK_FC'] = compiler.fc
env.set('SPACK_FC', compiler.fc)
os.environ['SPACK_COMPILER_SPEC'] = str(pkg.spec.compiler)
# Set SPACK compiler rpath flags so that our wrapper knows what to use
env.set('SPACK_CC_RPATH_ARG', compiler.cc_rpath_arg)
env.set('SPACK_CXX_RPATH_ARG', compiler.cxx_rpath_arg)
env.set('SPACK_F77_RPATH_ARG', compiler.f77_rpath_arg)
env.set('SPACK_FC_RPATH_ARG', compiler.fc_rpath_arg)
# Add every valid compiler flag to the environment, prefixed with "SPACK_"
for flag in spack.spec.FlagMap.valid_compiler_flags():
# Concreteness guarantees key safety here
if flags[flag] != []:
env.set('SPACK_' + flag.upper(), ' '.join(f for f in flags[flag]))
#ifdef NEW
env.set('SPACK_COMPILER_SPEC', str(pkg.spec.compiler))
return env
#else /* not NEW */
for mod in compiler.modules:
load_module(mod)
#endif /* not NEW */
def set_build_environment_variables(pkg):
"""This ensures a clean install environment when we build packages.
def set_build_environment_variables(pkg, env):
"""
This ensures a clean install environment when we build packages
"""
# Add spack build environment path with compiler wrappers first in
# the path. We add both spack.env_path, which includes default
# wrappers (cc, c++, f77, f90), AND a subdirectory containing
# compiler-specific symlinks. The latter ensures that builds that
# are sensitive to the *name* of the compiler see the right name
# when we're building wtih the wrappers.
# when we're building with the wrappers.
#
# Conflicts on case-insensitive systems (like "CC" and "cc") are
# handled by putting one in the <build_env_path>/case-insensitive
# directory. Add that to the path too.
env_paths = []
def add_env_path(path):
env_paths.append(path)
ci = join_path(path, 'case-insensitive')
if os.path.isdir(ci): env_paths.append(ci)
add_env_path(spack.build_env_path)
add_env_path(join_path(spack.build_env_path, pkg.compiler.name))
for item in [spack.build_env_path, join_path(spack.build_env_path, pkg.compiler.name)]:
env_paths.append(item)
ci = join_path(item, 'case-insensitive')
if os.path.isdir(ci):
env_paths.append(ci)
path_put_first("PATH", env_paths)
path_set(SPACK_ENV_PATH, env_paths)
for item in reversed(env_paths):
env.prepend_path('PATH', item)
env.set_path(SPACK_ENV_PATH, env_paths)
# Prefixes of all of the package's dependencies go in
# SPACK_DEPENDENCIES
# Prefixes of all of the package's dependencies go in SPACK_DEPENDENCIES
dep_prefixes = [d.prefix for d in pkg.spec.traverse(root=False)]
path_set(SPACK_DEPENDENCIES, dep_prefixes)
env.set_path(SPACK_DEPENDENCIES, dep_prefixes)
env.set_path('CMAKE_PREFIX_PATH', dep_prefixes) # Add dependencies to CMAKE_PREFIX_PATH
# Install prefix
os.environ[SPACK_PREFIX] = pkg.prefix
env.set(SPACK_PREFIX, pkg.prefix)
# Install root prefix
os.environ[SPACK_INSTALL] = spack.install_path
env.set(SPACK_INSTALL, spack.install_path)
# Remove these vars from the environment during build because they
# can affect how some packages find libraries. We want to make
# sure that builds never pull in unintended external dependencies.
pop_keys(os.environ, "LD_LIBRARY_PATH", "LD_RUN_PATH", "DYLD_LIBRARY_PATH")
env.unset('LD_LIBRARY_PATH')
env.unset('LD_RUN_PATH')
env.unset('DYLD_LIBRARY_PATH')
# Add bin directories from dependencies to the PATH for the build.
bin_dirs = ['%s/bin' % prefix for prefix in dep_prefixes]
path_put_first('PATH', [bin for bin in bin_dirs if os.path.isdir(bin)])
bin_dirs = reversed(filter(os.path.isdir, ['%s/bin' % prefix for prefix in dep_prefixes]))
for item in bin_dirs:
env.prepend_path('PATH', item)
# Working directory for the spack command itself, for debug logs.
if spack.debug:
os.environ[SPACK_DEBUG] = "TRUE"
os.environ[SPACK_SHORT_SPEC] = pkg.spec.short_spec
os.environ[SPACK_DEBUG_LOG_DIR] = spack.spack_working_dir
# Add dependencies to CMAKE_PREFIX_PATH
path_set("CMAKE_PREFIX_PATH", dep_prefixes)
env.set(SPACK_DEBUG, 'TRUE')
env.set(SPACK_SHORT_SPEC, pkg.spec.short_spec)
env.set(SPACK_DEBUG_LOG_DIR, spack.spack_working_dir)
# Add any pkgconfig directories to PKG_CONFIG_PATH
pkg_config_dirs = []
for p in dep_prefixes:
for libdir in ('lib', 'lib64'):
pcdir = join_path(p, libdir, 'pkgconfig')
for maybe in ('lib', 'lib64', 'share'):
pcdir = join_path(p, maybe, 'pkgconfig')
if os.path.isdir(pcdir):
pkg_config_dirs.append(pcdir)
#ifdef NEW
env.set_path('PKG_CONFIG_PATH', pkg_config_dirs)
return env
#else /* not NEW */
path_put_first("PKG_CONFIG_PATH", pkg_config_dirs)
if pkg.spec.architecture.target.module_name:
load_module(pkg.spec.architecture.target.module_name)
#endif /* not NEW */
def set_module_variables_for_package(pkg, m):
def set_module_variables_for_package(pkg, module):
"""Populate the module scope of install() with some useful functions.
This makes things easier for package writers.
"""
@ -248,6 +305,8 @@ def set_module_variables_for_package(pkg, m):
jobs = 1
elif pkg.make_jobs:
jobs = pkg.make_jobs
m = module
m.make_jobs = jobs
# TODO: make these build deps that can be installed if not found.
@ -265,7 +324,7 @@ def set_module_variables_for_package(pkg, m):
# TODO: of build dependencies, as opposed to link dependencies.
# TODO: Currently, everything is a link dependency, but tools like
# TODO: this shouldn't be.
m.cmake = which("cmake")
m.cmake = Executable('cmake')
# standard CMake arguments
m.std_cmake_args = ['-DCMAKE_INSTALL_PREFIX=%s' % pkg.prefix,
@ -282,7 +341,7 @@ def set_module_variables_for_package(pkg, m):
m.spack_cc = join_path(link_dir, pkg.compiler.link_paths['cc'])
m.spack_cxx = join_path(link_dir, pkg.compiler.link_paths['cxx'])
m.spack_f77 = join_path(link_dir, pkg.compiler.link_paths['f77'])
m.spack_f90 = join_path(link_dir, pkg.compiler.link_paths['fc'])
m.spack_fc = join_path(link_dir, pkg.compiler.link_paths['fc'])
# Emulate some shell commands for convenience
m.pwd = os.getcwd
@ -303,6 +362,9 @@ def set_module_variables_for_package(pkg, m):
# a Prefix object.
m.prefix = pkg.prefix
# Platform-specific library suffix.
m.dso_suffix = dso_suffix
def get_rpaths(pkg):
"""Get a list of all the rpaths for a package."""
@ -334,22 +396,53 @@ def parent_class_modules(cls):
def setup_package(pkg):
"""Execute all environment setup routines."""
set_compiler_environment_variables(pkg)
set_build_environment_variables(pkg)
spack_env = EnvironmentModifications()
run_env = EnvironmentModifications()
# If a user makes their own package repo, e.g.
# spack.repos.mystuff.libelf.Libelf, and they inherit from
# an existing class like spack.repos.original.libelf.Libelf,
# then set the module variables for both classes so the
# parent class can still use them if it gets called.
modules = parent_class_modules(pkg.__class__)
for mod in modules:
set_module_variables_for_package(pkg, mod)
# Before proceeding, ensure that specs and packages are consistent
#
# This is a confusing behavior due to how packages are
# constructed. `setup_dependent_package` may set attributes on
# specs in the DAG for use by other packages' install
# method. However, spec.package will look up a package via
# spack.repo, which defensively copies specs into packages. This
# code ensures that all packages in the DAG have pieces of the
# same spec object at build time.
#
# This is safe for the build process, b/c the build process is a
# throwaway environment, but it is kind of dirty.
#
# TODO: Think about how to avoid this fix and do something cleaner.
for s in pkg.spec.traverse(): s.package.spec = s
# Allow dependencies to set up environment as well.
for dep_spec in pkg.spec.traverse(root=False):
dep_spec.package.setup_dependent_environment(
pkg.module, dep_spec, pkg.spec)
set_compiler_environment_variables(pkg, spack_env)
set_build_environment_variables(pkg, spack_env)
# traverse in postorder so package can use vars from its dependencies
spec = pkg.spec
for dspec in pkg.spec.traverse(order='post', root=False):
# If a user makes their own package repo, e.g.
# spack.repos.mystuff.libelf.Libelf, and they inherit from
# an existing class like spack.repos.original.libelf.Libelf,
# then set the module variables for both classes so the
# parent class can still use them if it gets called.
spkg = dspec.package
modules = parent_class_modules(spkg.__class__)
for mod in modules:
set_module_variables_for_package(spkg, mod)
set_module_variables_for_package(spkg, spkg.module)
# Allow dependencies to modify the module
dpkg = dspec.package
dpkg.setup_dependent_package(pkg.module, spec)
dpkg.setup_dependent_environment(spack_env, run_env, spec)
set_module_variables_for_package(pkg, pkg.module)
pkg.setup_environment(spack_env, run_env)
# Make sure nothing's strange about the Spack environment.
validate(spack_env, tty.warn)
spack_env.apply_modifications()
def fork(pkg, function):
@ -366,23 +459,23 @@ def child_fun():
# do stuff
build_env.fork(pkg, child_fun)
Forked processes are run with the build environemnt set up by
Forked processes are run with the build environment set up by
spack.build_environment. This allows package authors to have
full control over the environment, etc. without offecting
full control over the environment, etc. without affecting
other builds that might be executed in the same spack call.
If something goes wrong, the child process is expected toprint
If something goes wrong, the child process is expected to print
the error and the parent process will exit with error as
well. If things go well, the child exits and the parent
carries on.
"""
try:
pid = os.fork()
except OSError, e:
except OSError as e:
raise InstallError("Unable to fork build process: %s" % e)
if pid == 0:
# Give the child process the package's build environemnt.
# Give the child process the package's build environment.
setup_package(pkg)
try:
@ -393,7 +486,7 @@ def child_fun():
# which interferes with unit tests.
os._exit(0)
except spack.error.SpackError, e:
except spack.error.SpackError as e:
e.die()
except:
@ -408,8 +501,7 @@ def child_fun():
# message. Just make the parent exit with an error code.
pid, returncode = os.waitpid(pid, 0)
if returncode != 0:
raise InstallError("Installation process had nonzero exit code."
.format(str(returncode)))
raise InstallError("Installation process had nonzero exit code.".format(str(returncode)))
class InstallError(spack.error.SpackError):

16
lib/spack/spack/cmd/__init__.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import re

16
lib/spack/spack/cmd/activate.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import llnl.util.tty as tty

16
lib/spack/spack/cmd/arch.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import spack
import spack.architecture as architecture

16
lib/spack/spack/cmd/bootstrap.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
from subprocess import check_call

16
lib/spack/spack/cmd/cd.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import spack.cmd.location
import spack.modules

16
lib/spack/spack/cmd/checksum.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import hashlib

16
lib/spack/spack/cmd/clean.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013-2014, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse

48
lib/spack/spack/cmd/compiler.py
View File

@ -1,54 +1,52 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import sys
from external import argparse
import llnl.util.tty as tty
from llnl.util.tty.color import colorize
from llnl.util.tty.colify import colify
from llnl.util.lang import index_by
import spack.architecture
import spack.compiler
import spack.compilers
import spack.spec
import spack.config
from spack.util.environment import get_path
import spack.spec
from llnl.util.lang import index_by
from llnl.util.tty.colify import colify
from llnl.util.tty.color import colorize
from spack.spec import CompilerSpec
from spack.util.environment import get_path
description = "Manage compilers"
def setup_parser(subparser):
sp = subparser.add_subparsers(metavar='SUBCOMMAND', dest='compiler_command')
sp = subparser.add_subparsers(
metavar='SUBCOMMAND', dest='compiler_command')
scopes = spack.config.config_scopes
# Add
add_parser = sp.add_parser('add', help='Add compilers to the Spack configuration.')
add_parser.add_argument('add_paths', nargs=argparse.REMAINDER)
add_parser.add_argument('--scope', choices=scopes, default=spack.cmd.default_modify_scope,
# Find
find_parser = sp.add_parser('find', aliases=['add'], help='Search the system for compilers to add to the Spack configuration.')
find_parser.add_argument('add_paths', nargs=argparse.REMAINDER)
find_parser.add_argument('--scope', choices=scopes, default=spack.cmd.default_modify_scope,
help="Configuration scope to modify.")
# Remove
@ -74,13 +72,11 @@ def setup_parser(subparser):
def compiler_add(args):
"""Search either $PATH or a list of paths OR MODULES for compilers and add them
to Spack's configuration."""
paths = args.add_paths # This might be a parser method. Parsing method to add_paths
paths = args.add_paths
if not paths:
paths = get_path('PATH')
compilers = [c for c in spack.compilers.find_compilers(*paths)
compilers = [c for c in spack.compilers.find_compilers(*args.add_paths)
if c.spec not in spack.compilers.all_compilers(scope=args.scope)]
if compilers:

16
lib/spack/spack/cmd/compilers.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import llnl.util.tty as tty
from llnl.util.tty.colify import colify

16
lib/spack/spack/cmd/config.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
import argparse

50
lib/spack/spack/cmd/create.py
View File

@ -1,27 +1,29 @@
_copyright = """\
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""
import string
import os
import hashlib
@ -47,22 +49,22 @@
description = "Create a new package file from an archive URL"
package_template = string.Template("""\
# FIXME:
# This is a template package file for Spack. We've conveniently
# put "FIXME" labels next to all the things you'll want to change.
package_template = string.Template(
_copyright + """
#
# Once you've edited all the FIXME's, delete this whole message,
# save this file, and test out your package like this:
# This is a template package file for Spack. We've put "FIXME"
# next to all the things you'll want to change. Once you've handled
# them, you can save this file and test your package like this:
#
# spack install ${name}
#
# You can always get back here to change things with:
# You can edit this file again by typing:
#
# spack edit ${name}
#
# See the spack documentation for more information on building
# packages.
# See the Spack documentation for more information on packaging.
# If you submit this package back to Spack as a pull request,
# please first remove this boilerplate and all FIXME comments.
#
from spack import *
@ -124,10 +126,12 @@ def __call__(self, stage):
autotools = "configure('--prefix=%s' % prefix)"
cmake = "cmake('.', *std_cmake_args)"
python = "python('setup.py', 'install', '--prefix=%s' % prefix)"
r = "R('CMD', 'INSTALL', '--library=%s' % self.module.r_lib_dir, '%s' % self.stage.archive_file)"
config_lines = ((r'/configure$', 'autotools', autotools),
(r'/CMakeLists.txt$', 'cmake', cmake),
(r'/setup.py$', 'python', python))
(r'/setup.py$', 'python', python),
(r'/NAMESPACE$', 'r', r))
# Peek inside the tarball.
tar = which('tar')
@ -208,7 +212,7 @@ def find_repository(spec, args):
return repo
def fetch_tarballs(url, name, args):
def fetch_tarballs(url, name, version):
"""Try to find versions of the supplied archive by scraping the web.
Prompts the user to select how many to download if many are found.
@ -222,7 +226,7 @@ def fetch_tarballs(url, name, args):
archives_to_fetch = 1
if not versions:
# If the fetch failed for some reason, revert to what the user provided
versions = { "version" : url }
versions = { version : url }
elif len(versions) > 1:
tty.msg("Found %s versions of %s:" % (len(versions), name),
*spack.cmd.elide_list(
@ -256,7 +260,7 @@ def create(parser, args):
tty.msg("Creating template for package %s" % name)
# Fetch tarballs (prompting user if necessary)
versions, urls = fetch_tarballs(url, name, args)
versions, urls = fetch_tarballs(url, name, version)
# Try to guess what configure system is used.
guesser = ConfigureGuesser()
@ -272,6 +276,10 @@ def create(parser, args):
if guesser.build_system == 'python':
name = 'py-%s' % name
# Prepend 'r-' to R package names, by convention.
if guesser.build_system == 'r':
name = 'r-%s' % name
# Create a directory for the new package.
pkg_path = repo.filename_for_package_name(name)
if os.path.exists(pkg_path) and not args.force:

16
lib/spack/spack/cmd/deactivate.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import llnl.util.tty as tty

16
lib/spack/spack/cmd/dependents.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse

20
lib/spack/spack/cmd/diy.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
import os
@ -75,8 +75,8 @@ def diy(self, args):
edit_package(spec.name, spack.repo.first_repo(), None, True)
return
if not spec.version.concrete:
tty.die("spack diy spec must have a single, concrete version.")
if not spec.versions.concrete:
tty.die("spack diy spec must have a single, concrete version. Did you forget a package version number?")
spec.concretize()
package = spack.repo.get(spec)

16
lib/spack/spack/cmd/doc.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
description = "Run pydoc from within spack."

16
lib/spack/spack/cmd/edit.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import string

16
lib/spack/spack/cmd/env.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import argparse

16
lib/spack/spack/cmd/extensions.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
import argparse

16
lib/spack/spack/cmd/fetch.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse

205
lib/spack/spack/cmd/find.py
View File

@ -1,78 +1,114 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
import collections
import itertools
import argparse
from StringIO import StringIO
import sys
import llnl.util.tty as tty
import spack
import spack.spec
from llnl.util.lang import *
from llnl.util.tty.colify import *
from llnl.util.tty.color import *
from llnl.util.lang import *
import spack
import spack.spec
description = "Find installed spack packages"
description ="Find installed spack packages"
def setup_parser(subparser):
format_group = subparser.add_mutually_exclusive_group()
format_group.add_argument('-s',
'--short',
action='store_const',
dest='mode',
const='short',
help='Show only specs (default)')
format_group.add_argument('-p',
'--paths',
action='store_const',
dest='mode',
const='paths',
help='Show paths to package install directories')
format_group.add_argument(
'-s', '--short', action='store_const', dest='mode', const='short',
help='Show only specs (default)')
format_group.add_argument(
'-p', '--paths', action='store_const', dest='mode', const='paths',
help='Show paths to package install directories')
format_group.add_argument(
'-d', '--deps', action='store_const', dest='mode', const='deps',
'-d',
'--deps',
action='store_const',
dest='mode',
const='deps',
help='Show full dependency DAG of installed packages')
subparser.add_argument(
'-l', '--long', action='store_true',
help='Show dependency hashes as well as versions.')
subparser.add_argument(
'-L', '--very-long', action='store_true',
help='Show dependency hashes as well as versions.')
subparser.add_argument('-l',
'--long',
action='store_true',
dest='long',
help='Show dependency hashes as well as versions.')
subparser.add_argument('-L',
'--very-long',
action='store_true',
dest='very_long',
help='Show dependency hashes as well as versions.')
subparser.add_argument('-f',
'--show-flags',
action='store_true',
dest='show_flags',
help='Show spec compiler flags.')
subparser.add_argument(
'-u', '--unknown', action='store_true',
'-e',
'--explicit',
action='store_true',
help='Show only specs that were installed explicitly')
subparser.add_argument(
'-E',
'--implicit',
action='store_true',
help='Show only specs that were installed as dependencies')
subparser.add_argument(
'-u',
'--unknown',
action='store_true',
dest='unknown',
help='Show only specs Spack does not have a package for.')
subparser.add_argument(
'-m', '--missing', action='store_true',
'-m',
'--missing',
action='store_true',
dest='missing',
help='Show missing dependencies as well as installed specs.')
subparser.add_argument(
'-M', '--only-missing', action='store_true',
help='Show only missing dependencies.')
subparser.add_argument(
'-N', '--namespace', action='store_true',
help='Show fully qualified package names.')
subparser.add_argument('-M',
'--only-missing',
action='store_true',
dest='only_missing',
help='Show only missing dependencies.')
subparser.add_argument('-N',
'--namespace',
action='store_true',
help='Show fully qualified package names.')
subparser.add_argument(
'query_specs', nargs=argparse.REMAINDER,
help='optional specs to filter results')
subparser.add_argument('query_specs',
nargs=argparse.REMAINDER,
help='optional specs to filter results')
def gray_hash(spec, length):
@ -89,31 +125,29 @@ def display_specs(specs, **kwargs):
hashes = True
hlen = None
# Make a dict with specs keyed by target and compiler.
nfmt = '.' if namespace else '_'
format_string = '$%s$@$+' % nfmt
flags = kwargs.get('show_flags', False)
if flags:
format_string = '$%s$@$%%+$+' % nfmt
# Make a dict with specs keyed by architecture and compiler.
index = index_by(specs, ('architecture', 'compiler'))
# Create sort key based off of whether read architecture is string
def sort_key(index_dict):
if isinstance(index_dict[0],basestring):
return(str, index_dict[1]._cmp_key())
elif isinstance(index_dict[0], spack.architecture.Arch):
return (index_dict[0]._cmp_key(), index_dict[1]._cmp_key())
# Traverse the index and print out each package
for i, (architecture, compiler) in enumerate(sorted(index)):
if i > 0:
print
sorted_index = sorted(index, key=sort_key)
for i, (architecture, compiler) in enumerate(sorted_index):
if i > 0: print
header = "%s{%s} / %s{%s}" % (
spack.spec.architecture_color, architecture,
spack.spec.compiler_color, compiler)
header = "%s{%s} / %s{%s}" % (spack.spec.architecture_color,
architecture, spack.spec.compiler_color,
compiler)
tty.hline(colorize(header), char='-')
specs = index[(architecture, compiler)]
specs.sort()
nfmt = '.' if namespace else '_'
abbreviated = [s.format('$%s$@$+' % nfmt, color=True) for s in specs]
abbreviated = [s.format(format_string, color=True) for s in specs]
if mode == 'paths':
# Print one spec per line along with prefix path
width = max(len(s) for s in abbreviated)
@ -122,38 +156,46 @@ def sort_key(index_dict):
for abbrv, spec in zip(abbreviated, specs):
if hashes:
print gray_hash(spec, hlen),
print format % (abbrv, spec.prefix)
print(gray_hash(spec, hlen), )
print(format % (abbrv, spec.prefix))
elif mode == 'deps':
for spec in specs:
print spec.tree(
format='$%s$@$+' % nfmt,
print(spec.tree(
format=format_string,
color=True,
indent=4,
prefix=(lambda s: gray_hash(s, hlen)) if hashes else None)
prefix=(lambda s: gray_hash(s, hlen)) if hashes else None))
elif mode == 'short':
def fmt(s):
string = ""
if hashes:
string += gray_hash(s, hlen) + ' '
string += s.format('$-%s$@$+' % nfmt, color=True)
# Print columns of output if not printing flags
if not flags:
return string
colify(fmt(s) for s in specs)
def fmt(s):
string = ""
if hashes:
string += gray_hash(s, hlen) + ' '
string += s.format('$-%s$@$+' % nfmt, color=True)
return string
colify(fmt(s) for s in specs)
# Print one entry per line if including flags
else:
for spec in specs:
# Print the hash if necessary
hsh = gray_hash(spec, hlen) + ' ' if hashes else ''
print(hsh + spec.format(format_string, color=True) + '\n')
else:
raise ValueError(
"Invalid mode for display_specs: %s. Must be one of (paths, deps, short)." % mode)
raise ValueError("Invalid mode for display_specs: %s. Must be one of (paths, deps, short)." % mode) # NOQA: ignore=E501
def find(parser, args):
# Filter out specs that don't exist.
query_specs = spack.cmd.parse_specs(args.query_specs)
query_specs, nonexisting = partition_list(
query_specs, lambda s: spack.repo.exists(s.name))
query_specs, lambda s: spack.repo.exists(s.name) or not s.name)
if nonexisting:
msg = "No such package%s: " % ('s' if len(nonexisting) > 1 else '')
@ -171,13 +213,21 @@ def find(parser, args):
installed = any
if args.unknown:
known = False
q_args = { 'installed' : installed, 'known' : known }
explicit = any
if args.explicit:
explicit = False
if args.implicit:
explicit = True
q_args = {'installed': installed, 'known': known, "explicit": explicit}
# Get all the specs the user asked for
if not query_specs:
specs = set(spack.installed_db.query(**q_args))
else:
results = [set(spack.installed_db.query(qs, **q_args)) for qs in query_specs]
results = [set(spack.installed_db.query(qs, **q_args))
for qs in query_specs]
specs = set.union(*results)
if not args.mode:
@ -185,7 +235,12 @@ def find(parser, args):
if sys.stdout.isatty():
tty.msg("%d installed packages." % len(specs))
display_specs(specs, mode=args.mode,
display_specs(specs,
mode=args.mode,
long=args.long,
very_long=args.very_long,
#ifdef NEW
show_flags=args.show_flags)
#else /* not NEW */
namespace=args.namespace)
#endif /* not NEW */

16
lib/spack/spack/cmd/graph.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse

16
lib/spack/spack/cmd/help.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys

20
lib/spack/spack/cmd/info.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import textwrap
from llnl.util.tty.colify import *
@ -52,7 +52,7 @@ def print_text_info(pkg):
print "Safe versions: "
if not pkg.versions:
print("None")
print(" None")
else:
pad = padder(pkg.versions, 4)
for v in reversed(sorted(pkg.versions)):
@ -62,7 +62,7 @@ def print_text_info(pkg):
print
print "Variants:"
if not pkg.variants:
print "None"
print " None"
else:
pad = padder(pkg.variants, 4)

19
lib/spack/spack/cmd/install.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
@ -78,4 +78,5 @@ def install(parser, args):
ignore_deps=args.ignore_deps,
make_jobs=args.jobs,
verbose=args.verbose,
fake=args.fake)
fake=args.fake,
explicit=True)

16
lib/spack/spack/cmd/list.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
import llnl.util.tty as tty

16
lib/spack/spack/cmd/load.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by David Beckingsale, david@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import spack.modules

16
lib/spack/spack/cmd/location.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import sys

16
lib/spack/spack/cmd/md5.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013-2014, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import hashlib

16
lib/spack/spack/cmd/mirror.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import sys

45
lib/spack/spack/cmd/module.py
View File

@ -1,54 +1,52 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
import os
import shutil
import argparse
import sys
import llnl.util.tty as tty
from llnl.util.lang import partition_list
from llnl.util.filesystem import mkdirp
import spack.cmd
from llnl.util.filesystem import mkdirp
from spack.modules import module_types
from spack.util.string import *
from spack.spec import Spec
description ="Manipulate modules and dotkits."
description = "Manipulate modules and dotkits."
def setup_parser(subparser):
sp = subparser.add_subparsers(metavar='SUBCOMMAND', dest='module_command')
refresh_parser = sp.add_parser('refresh', help='Regenerate all module files.')
sp.add_parser('refresh', help='Regenerate all module files.')
find_parser = sp.add_parser('find', help='Find module files for packages.')
find_parser.add_argument(
'module_type', help="Type of module to find file for. [" + '|'.join(module_types) + "]")
find_parser.add_argument('spec', nargs='+', help='spec to find a module file for.')
find_parser.add_argument('module_type',
help="Type of module to find file for. [" +
'|'.join(module_types) + "]")
find_parser.add_argument('spec',
nargs='+',
help='spec to find a module file for.')
def module_find(mtype, spec_array):
@ -58,7 +56,8 @@ def module_find(mtype, spec_array):
should type to use that package's module.
"""
if mtype not in module_types:
tty.die("Invalid module type: '%s'. Options are %s" % (mtype, comma_or(module_types)))
tty.die("Invalid module type: '%s'. Options are %s" %
(mtype, comma_or(module_types)))
specs = spack.cmd.parse_specs(spec_array)
if len(specs) > 1:
@ -80,7 +79,7 @@ def module_find(mtype, spec_array):
if not os.path.isfile(mod.file_name):
tty.die("No %s module is installed for %s" % (mtype, spec))
print mod.use_name
print(mod.use_name)
def module_refresh():
@ -94,11 +93,9 @@ def module_refresh():
shutil.rmtree(cls.path, ignore_errors=False)
mkdirp(cls.path)
for spec in specs:
tty.debug(" Writing file for %s" % spec)
cls(spec).write()
def module(parser, args):
if args.module_command == 'refresh':
module_refresh()

16
lib/spack/spack/cmd/package-list.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import re
import cgi

16
lib/spack/spack/cmd/patch.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse

19
lib/spack/spack/cmd/pkg.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
@ -77,7 +77,8 @@ def get_git():
def list_packages(rev):
git = get_git()
relpath = spack.packages_path[len(spack.prefix + os.path.sep):] + os.path.sep
pkgpath = os.path.join(spack.packages_path, 'packages')
relpath = pkgpath[len(spack.prefix + os.path.sep):] + os.path.sep
output = git('ls-tree', '--full-tree', '--name-only', rev, relpath,
output=str)
return sorted(line[len(relpath):] for line in output.split('\n') if line)

16
lib/spack/spack/cmd/providers.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import argparse

16
lib/spack/spack/cmd/purge.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import spack.stage as stage

16
lib/spack/spack/cmd/python.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import sys

16
lib/spack/spack/cmd/reindex.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013-2015, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import spack

18
lib/spack/spack/cmd/repo.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013-2015, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://software.llnl.gov/spack
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import re

16
lib/spack/spack/cmd/restage.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013-2014, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse

16
lib/spack/spack/cmd/spec.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import spack.cmd

21
lib/spack/spack/cmd/stage.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import argparse
@ -35,6 +35,9 @@ def setup_parser(subparser):
subparser.add_argument(
'-n', '--no-checksum', action='store_true', dest='no_checksum',
help="Do not check downloaded packages against checksum")
subparser.add_argument(
'-p', '--path', dest='path',
help="Path to stage package, does not add to spack tree")
subparser.add_argument(
'specs', nargs=argparse.REMAINDER, help="specs of packages to stage")
@ -50,4 +53,6 @@ def stage(parser, args):
specs = spack.cmd.parse_specs(args.specs, concretize=True)
for spec in specs:
package = spack.repo.get(spec)
if args.path:
package.path = args.path
package.do_stage()

300
lib/spack/spack/cmd/test-install.py
View File

@ -1,109 +1,128 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import xml.etree.ElementTree as ET
import itertools
import re
import os
import codecs
import os
import time
import xml.dom.minidom
import xml.etree.ElementTree as ET
import llnl.util.tty as tty
from llnl.util.filesystem import *
import spack
import spack.cmd
from llnl.util.filesystem import *
from spack.build_environment import InstallError
from spack.fetch_strategy import FetchError
import spack.cmd
description = "Run package installation as a unit test, output formatted results."
def setup_parser(subparser):
subparser.add_argument(
'-j', '--jobs', action='store', type=int,
help="Explicitly set number of make jobs. Default is #cpus.")
subparser.add_argument('-j',
'--jobs',
action='store',
type=int,
help="Explicitly set number of make jobs. Default is #cpus.")
subparser.add_argument(
'-n', '--no-checksum', action='store_true', dest='no_checksum',
help="Do not check packages against checksum")
subparser.add_argument('-n',
'--no-checksum',
action='store_true',
dest='no_checksum',
help="Do not check packages against checksum")
subparser.add_argument(
'-o', '--output', action='store', help="test output goes in this file")
subparser.add_argument('-o', '--output', action='store', help="test output goes in this file")
subparser.add_argument(
'package', nargs=argparse.REMAINDER, help="spec of package to install")
class JunitResultFormat(object):
def __init__(self):
self.root = ET.Element('testsuite')
self.tests = []
def add_test(self, buildId, testResult, buildInfo=None):
self.tests.append((buildId, testResult, buildInfo))
def write_to(self, stream):
self.root.set('tests', '{0}'.format(len(self.tests)))
for buildId, testResult, buildInfo in self.tests:
testcase = ET.SubElement(self.root, 'testcase')
testcase.set('classname', buildId.name)
testcase.set('name', buildId.stringId())
if testResult == TestResult.FAILED:
failure = ET.SubElement(testcase, 'failure')
failure.set('type', "Build Error")
failure.text = buildInfo
elif testResult == TestResult.SKIPPED:
skipped = ET.SubElement(testcase, 'skipped')
skipped.set('type', "Skipped Build")
skipped.text = buildInfo
ET.ElementTree(self.root).write(stream)
subparser.add_argument('package', nargs=argparse.REMAINDER, help="spec of package to install")
class TestResult(object):
PASSED = 0
FAILED = 1
SKIPPED = 2
ERRORED = 3
class BuildId(object):
def __init__(self, spec):
self.name = spec.name
self.version = spec.version
self.hashId = spec.dag_hash()
class TestSuite(object):
def __init__(self, filename):
self.filename = filename
self.root = ET.Element('testsuite')
self.tests = []
def stringId(self):
return "-".join(str(x) for x in (self.name, self.version, self.hashId))
def __enter__(self):
return self
def __hash__(self):
return hash((self.name, self.version, self.hashId))
def append(self, item):
if not isinstance(item, TestCase):
raise TypeError('only TestCase instances may be appended to a TestSuite instance')
self.tests.append(item) # Append the item to the list of tests
def __eq__(self, other):
if not isinstance(other, BuildId):
return False
def __exit__(self, exc_type, exc_val, exc_tb):
# Prepare the header for the entire test suite
number_of_errors = sum(x.result_type == TestResult.ERRORED for x in self.tests)
self.root.set('errors', str(number_of_errors))
number_of_failures = sum(x.result_type == TestResult.FAILED for x in self.tests)
self.root.set('failures', str(number_of_failures))
self.root.set('tests', str(len(self.tests)))
return ((self.name, self.version, self.hashId) ==
(other.name, other.version, other.hashId))
for item in self.tests:
self.root.append(item.element)
with open(self.filename, 'wb') as file:
xml_string = ET.tostring(self.root)
xml_string = xml.dom.minidom.parseString(xml_string).toprettyxml()
file.write(xml_string)
class TestCase(object):
results = {
TestResult.PASSED: None,
TestResult.SKIPPED: 'skipped',
TestResult.FAILED: 'failure',
TestResult.ERRORED: 'error',
}
def __init__(self, classname, name, time=None):
self.element = ET.Element('testcase')
self.element.set('classname', str(classname))
self.element.set('name', str(name))
if time is not None:
self.element.set('time', str(time))
self.result_type = None
def set_result(self, result_type, message=None, error_type=None, text=None):
self.result_type = result_type
result = TestCase.results[self.result_type]
if result is not None and result is not TestResult.PASSED:
subelement = ET.SubElement(self.element, result)
if error_type is not None:
subelement.set('type', error_type)
if message is not None:
subelement.set('message', str(message))
if text is not None:
subelement.text = text
def fetch_log(path):
@ -114,46 +133,76 @@ def fetch_log(path):
def failed_dependencies(spec):
return set(childSpec for childSpec in spec.dependencies.itervalues() if not
spack.repo.get(childSpec).installed)
return set(item for item in spec.dependencies.itervalues() if not spack.repo.get(item).installed)
def create_test_output(topSpec, newInstalls, output, getLogFunc=fetch_log):
# Post-order traversal is not strictly required but it makes sense to output
# tests for dependencies first.
for spec in topSpec.traverse(order='post'):
if spec not in newInstalls:
continue
def get_top_spec_or_die(args):
specs = spack.cmd.parse_specs(args.package, concretize=True)
if len(specs) > 1:
tty.die("Only 1 top-level package can be specified")
top_spec = iter(specs).next()
return top_spec
failedDeps = failed_dependencies(spec)
package = spack.repo.get(spec)
if failedDeps:
result = TestResult.SKIPPED
dep = iter(failedDeps).next()
depBID = BuildId(dep)
errOutput = "Skipped due to failed dependency: {0}".format(
depBID.stringId())
elif (not package.installed) and (not package.stage.source_path):
result = TestResult.FAILED
errOutput = "Failure to fetch package resources."
elif not package.installed:
result = TestResult.FAILED
lines = getLogFunc(package.build_log_path)
errMessages = list(line for line in lines if
re.search('error:', line, re.IGNORECASE))
errOutput = errMessages if errMessages else lines[-10:]
errOutput = '\n'.join(itertools.chain(
[spec.to_yaml(), "Errors:"], errOutput,
["Build Log:", package.build_log_path]))
else:
result = TestResult.PASSED
errOutput = None
bId = BuildId(spec)
output.add_test(bId, result, errOutput)
def install_single_spec(spec, number_of_jobs):
package = spack.repo.get(spec)
# If it is already installed, skip the test
if spack.repo.get(spec).installed:
testcase = TestCase(package.name, package.spec.short_spec, time=0.0)
testcase.set_result(TestResult.SKIPPED, message='Skipped [already installed]', error_type='already_installed')
return testcase
# If it relies on dependencies that did not install, skip
if failed_dependencies(spec):
testcase = TestCase(package.name, package.spec.short_spec, time=0.0)
testcase.set_result(TestResult.SKIPPED, message='Skipped [failed dependencies]', error_type='dep_failed')
return testcase
# Otherwise try to install the spec
try:
start_time = time.time()
package.do_install(keep_prefix=False,
keep_stage=True,
ignore_deps=False,
make_jobs=number_of_jobs,
verbose=True,
fake=False)
duration = time.time() - start_time
testcase = TestCase(package.name, package.spec.short_spec, duration)
testcase.set_result(TestResult.PASSED)
except InstallError:
# An InstallError is considered a failure (the recipe didn't work correctly)
duration = time.time() - start_time
# Try to get the log
lines = fetch_log(package.build_log_path)
text = '\n'.join(lines)
testcase = TestCase(package.name, package.spec.short_spec, duration)
testcase.set_result(TestResult.FAILED, message='Installation failure', text=text)
except FetchError:
# A FetchError is considered an error (we didn't even start building)
duration = time.time() - start_time
testcase = TestCase(package.name, package.spec.short_spec, duration)
testcase.set_result(TestResult.ERRORED, message='Unable to fetch package')
return testcase
def get_filename(args, top_spec):
if not args.output:
fname = 'test-{x.name}-{x.version}-{hash}.xml'.format(x=top_spec, hash=top_spec.dag_hash())
output_directory = join_path(os.getcwd(), 'test-output')
if not os.path.exists(output_directory):
os.mkdir(output_directory)
output_filename = join_path(output_directory, fname)
else:
output_filename = args.output
return output_filename
def test_install(parser, args):
# Check the input
if not args.package:
tty.die("install requires a package argument")
@ -162,50 +211,15 @@ def test_install(parser, args):
tty.die("The -j option must be a positive integer!")
if args.no_checksum:
spack.do_checksum = False # TODO: remove this global.
spack.do_checksum = False # TODO: remove this global.
specs = spack.cmd.parse_specs(args.package, concretize=True)
if len(specs) > 1:
tty.die("Only 1 top-level package can be specified")
topSpec = iter(specs).next()
newInstalls = set()
for spec in topSpec.traverse():
package = spack.repo.get(spec)
if not package.installed:
newInstalls.add(spec)
if not args.output:
bId = BuildId(topSpec)
outputDir = join_path(os.getcwd(), "test-output")
if not os.path.exists(outputDir):
os.mkdir(outputDir)
outputFpath = join_path(outputDir, "test-{0}.xml".format(bId.stringId()))
else:
outputFpath = args.output
for spec in topSpec.traverse(order='post'):
# Calling do_install for the top-level package would be sufficient but
# this attempts to keep going if any package fails (other packages which
# are not dependents may succeed)
package = spack.repo.get(spec)
if (not failed_dependencies(spec)) and (not package.installed):
try:
package.do_install(
keep_prefix=False,
keep_stage=True,
ignore_deps=False,
make_jobs=args.jobs,
verbose=True,
fake=False)
except InstallError:
pass
except FetchError:
pass
jrf = JunitResultFormat()
handled = {}
create_test_output(topSpec, newInstalls, jrf)
with open(outputFpath, 'wb') as F:
jrf.write_to(F)
# Get the one and only top spec
top_spec = get_top_spec_or_die(args)
# Get the filename of the test
output_filename = get_filename(args, top_spec)
# TEST SUITE
with TestSuite(output_filename) as test_suite:
# Traverse in post order : each spec is a test case
for spec in top_spec.traverse(order='post'):
test_case = install_single_spec(spec, args.jobs)
test_suite.append(test_case)

16
lib/spack/spack/cmd/test.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
from pprint import pprint

208
lib/spack/spack/cmd/uninstall.py
View File

@ -1,40 +1,55 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
from __future__ import print_function
import argparse
import llnl.util.tty as tty
from llnl.util.tty.colify import colify
import spack
import spack.cmd
import spack.repository
from spack.cmd.find import display_specs
from spack.package import PackageStillNeededError
description="Remove an installed package"
description = "Remove an installed package"
error_message = """You can either:
a) Use a more specific spec, or
b) use spack uninstall -a to uninstall ALL matching specs.
"""
def ask_for_confirmation(message):
while True:
tty.msg(message + '[y/n]')
choice = raw_input().lower()
if choice == 'y':
break
elif choice == 'n':
raise SystemExit('Operation aborted')
tty.warn('Please reply either "y" or "n"')
def setup_parser(subparser):
subparser.add_argument(
@ -43,10 +58,101 @@ def setup_parser(subparser):
subparser.add_argument(
'-a', '--all', action='store_true', dest='all',
help="USE CAREFULLY. Remove ALL installed packages that match each " +
"supplied spec. i.e., if you say uninstall libelf, ALL versions of " +
"libelf are uninstalled. This is both useful and dangerous, like rm -r.")
"supplied spec. i.e., if you say uninstall libelf, ALL versions of " +
"libelf are uninstalled. This is both useful and dangerous, like rm -r.")
subparser.add_argument(
'packages', nargs=argparse.REMAINDER, help="specs of packages to uninstall")
'-d', '--dependents', action='store_true', dest='dependents',
help='Also uninstall any packages that depend on the ones given via command line.'
)
subparser.add_argument(
'-y', '--yes-to-all', action='store_true', dest='yes_to_all',
help='Assume "yes" is the answer to every confirmation asked to the user.'
)
subparser.add_argument('packages', nargs=argparse.REMAINDER, help="specs of packages to uninstall")
def concretize_specs(specs, allow_multiple_matches=False, force=False):
"""
Returns a list of specs matching the non necessarily concretized specs given from cli
Args:
specs: list of specs to be matched against installed packages
allow_multiple_matches : boolean (if True multiple matches for each item in specs are admitted)
Return:
list of specs
"""
specs_from_cli = [] # List of specs that match expressions given via command line
has_errors = False
for spec in specs:
matching = spack.installed_db.query(spec)
# For each spec provided, make sure it refers to only one package.
# Fail and ask user to be unambiguous if it doesn't
if not allow_multiple_matches and len(matching) > 1:
tty.error("%s matches multiple packages:" % spec)
print()
display_specs(matching, long=True, show_flags=True)
print()
has_errors = True
# No installed package matches the query
if len(matching) == 0 and not force:
tty.error("%s does not match any installed packages." % spec)
has_errors = True
specs_from_cli.extend(matching)
if has_errors:
tty.die(error_message)
return specs_from_cli
def installed_dependents(specs):
"""
Returns a dictionary that maps a spec with a list of its installed dependents
Args:
specs: list of specs to be checked for dependents
Returns:
dictionary of installed dependents
"""
dependents = {}
for item in specs:
lst = [x for x in item.package.installed_dependents if x not in specs]
if lst:
lst = list(set(lst))
dependents[item] = lst
return dependents
def do_uninstall(specs, force):
"""
Uninstalls all the specs in a list.
Args:
specs: list of specs to be uninstalled
force: force uninstallation (boolean)
"""
packages = []
for item in specs:
try:
# should work if package is known to spack
packages.append(item.package)
except spack.repository.UnknownPackageError as e:
# The package.py file has gone away -- but still
# want to uninstall.
spack.Package(item).do_uninstall(force=True)
# Sort packages to be uninstalled by the number of installed dependents
# This ensures we do things in the right order
def num_installed_deps(pkg):
return len(pkg.installed_dependents)
packages.sort(key=num_installed_deps)
for item in packages:
item.do_uninstall(force=force)
def uninstall(parser, args):
@ -55,50 +161,34 @@ def uninstall(parser, args):
with spack.installed_db.write_transaction():
specs = spack.cmd.parse_specs(args.packages)
# Gets the list of installed specs that match the ones give via cli
uninstall_list = concretize_specs(specs, args.all, args.force) # takes care of '-a' is given in the cli
dependent_list = installed_dependents(uninstall_list) # takes care of '-d'
# For each spec provided, make sure it refers to only one package.
# Fail and ask user to be unambiguous if it doesn't
pkgs = []
for spec in specs:
matching_specs = spack.installed_db.query(spec)
if not args.all and len(matching_specs) > 1:
tty.error("%s matches multiple packages:" % spec)
print
display_specs(matching_specs, long=True)
print
print "You can either:"
print " a) Use a more specific spec, or"
print " b) use spack uninstall -a to uninstall ALL matching specs."
sys.exit(1)
# Process dependent_list and update uninstall_list
has_error = False
if dependent_list and not args.dependents and not args.force:
for spec, lst in dependent_list.items():
tty.error("Will not uninstall %s" % spec.format("$_$@$%@$#", color=True))
print('')
print("The following packages depend on it:")
display_specs(lst, long=True)
print('')
has_error = True
elif args.dependents:
for key, lst in dependent_list.items():
uninstall_list.extend(lst)
uninstall_list = list(set(uninstall_list))
if len(matching_specs) == 0:
if args.force: continue
tty.die("%s does not match any installed packages." % spec)
if has_error:
tty.die('You can use spack uninstall --dependents to uninstall these dependencies as well')
for s in matching_specs:
try:
# should work if package is known to spack
pkgs.append(s.package)
except spack.repository.UnknownPackageError, e:
# The package.py file has gone away -- but still
# want to uninstall.
spack.Package(s).do_uninstall(force=True)
if not args.yes_to_all:
tty.msg("The following packages will be uninstalled : ")
print('')
display_specs(uninstall_list, long=True, show_flags=True)
print('')
ask_for_confirmation('Do you want to proceed ? ')
# Sort packages to be uninstalled by the number of installed dependents
# This ensures we do things in the right order
def num_installed_deps(pkg):
return len(pkg.installed_dependents)
pkgs.sort(key=num_installed_deps)
# Uninstall packages in order now.
for pkg in pkgs:
try:
pkg.do_uninstall(force=args.force)
except PackageStillNeededError, e:
tty.error("Will not uninstall %s" % e.spec.format("$_$@$%@$#", color=True))
print
print "The following packages depend on it:"
display_specs(e.dependents, long=True)
print
print "You can use spack uninstall -f to force this action."
sys.exit(1)
# Uninstall everything on the list
do_uninstall(uninstall_list, args.force)

16
lib/spack/spack/cmd/unload.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by David Beckingsale, david@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import spack.modules

16
lib/spack/spack/cmd/unuse.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import spack.modules

16
lib/spack/spack/cmd/url-parse.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys

16
lib/spack/spack/cmd/urls.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import sys
import spack

16
lib/spack/spack/cmd/use.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import argparse
import spack.modules

16
lib/spack/spack/cmd/versions.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
from llnl.util.tty.colify import colify

157
lib/spack/spack/compiler.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import re
@ -92,27 +92,60 @@ class Compiler(object):
# version suffix for gcc.
suffixes = [r'-.*']
# Names of generic arguments used by this compiler
arg_rpath = '-Wl,-rpath,%s'
# Default flags used by a compiler to set an rpath
@property
def cc_rpath_arg(self):
return '-Wl,-rpath,'
# argument used to get C++11 options
cxx11_flag = "-std=c++11"
@property
def cxx_rpath_arg(self):
return '-Wl,-rpath,'
#ifdef NEW
@property
def f77_rpath_arg(self):
return '-Wl,-rpath,'
@property
def fc_rpath_arg(self):
return '-Wl,-rpath,'
#else /* not NEW */
# Cray PrgEnv name that can be used to load this compiler
PrgEnv = None
# Name of module used to switch versions of this compiler
PrgEnv_compiler = None
#endif /* not NEW */
#ifdef NEW
def __init__(self, cspec, cc, cxx, f77, fc, **kwargs):
#else /* not NEW */
def __init__(self, cspec, operating_system, paths, modules=[], alias=None):
#endif /* not NEW */
def check(exe):
if exe is None:
return None
_verify_executables(exe)
return exe
#ifdef NEW
self.cc = check(cc)
self.cxx = check(cxx)
self.f77 = check(f77)
self.fc = check(fc)
# Unfortunately have to make sure these params are accepted
# in the same order they are returned by sorted(flags)
# in compilers/__init__.py
self.flags = {}
for flag in spack.spec.FlagMap.valid_compiler_flags():
value = kwargs.get(flag, None)
if value is not None:
self.flags[flag] = value.split()
#else /* not NEW */
self.operating_system = operating_system
self.cc = check(paths[0])
@ -124,6 +157,7 @@ def check(exe):
else:
self.fc = check(paths[3])
#endif /* not NEW */
self.spec = cspec
self.modules = modules
self.alias = alias
@ -132,27 +166,86 @@ def check(exe):
def version(self):
return self.spec.version
# This property should be overridden in the compiler subclass if
# OpenMP is supported by that compiler
@property
def openmp_flag(self):
# If it is not overridden, assume it is not supported and warn the user
tty.die("The compiler you have chosen does not currently support OpenMP.",
"If you think it should, please edit the compiler subclass and",
"submit a pull request or issue.")
# This property should be overridden in the compiler subclass if
# C++11 is supported by that compiler
@property
def cxx11_flag(self):
# If it is not overridden, assume it is not supported and warn the user
tty.die("The compiler you have chosen does not currently support C++11.",
"If you think it should, please edit the compiler subclass and",
"submit a pull request or issue.")
# This property should be overridden in the compiler subclass if
# C++14 is supported by that compiler
@property
def cxx14_flag(self):
# If it is not overridden, assume it is not supported and warn the user
tty.die("The compiler you have chosen does not currently support C++14.",
"If you think it should, please edit the compiler subclass and",
"submit a pull request or issue.")
#
# Compiler classes have methods for querying the version of
# specific compiler executables. This is used when discovering compilers.
#
# Compiler *instances* are just data objects, and can only be
# constructed from an actual set of executables.
#
@classmethod
def default_version(cls, cc):
"""Override just this to override all compiler version functions."""
return dumpversion(cc)
@classmethod
def cc_version(cls, cc):
return cls.default_version(cc)
@classmethod
def cxx_version(cls, cxx):
return cls.default_version(cxx)
@classmethod
def f77_version(cls, f77):
return cls.default_version(f77)
@classmethod
def fc_version(cls, fc):
return cls.default_version(fc)
@classmethod
def _find_matches_in_path(cls, compiler_names, detect_version, *path):
"""Finds compilers in the paths supplied.
Looks for all combinations of ``compiler_names`` with the
``prefixes`` and ``suffixes`` defined for this compiler
class. If any compilers match the compiler_names,
prefixes, or suffixes, uses ``detect_version`` to figure
out what version the compiler is.
This returns a dict with compilers grouped by (prefix,
suffix, version) tuples. This can be further organized by
find().
"""
Looks for all combinations of ``compiler_names`` with the
``prefixes`` and ``suffixes`` defined for this compiler
class. If any compilers match the compiler_names,
prefixes, or suffixes, uses ``detect_version`` to figure
out what version the compiler is.
This returns a dict with compilers grouped by (prefix,
suffix, version) tuples. This can be further organized by
find().
"""
if not path:
path = get_path('PATH')
prefixes = [''] + cls.prefixes
suffixes = [''] + cls.suffixes
checks = []
for directory in path:
if not (os.path.isdir(directory) and
@ -188,16 +281,12 @@ def check(key):
return None
successful = [key for key in parmap(check, checks) if key is not None]
# The 'successful' list is ordered like the input paths.
# Reverse it here so that the dict creation (last insert wins)
# does not spoil the intented precedence.
successful.reverse()
return dict(((v, p, s), path) for v, p, s, path in successful)
#
# Compiler classes have methods for querying the version of
# specific compiler executables. This is used when discovering compilers.
#
# Compiler *instances* are just data objects, and can only be
# constructed from an actual set of executables.
#
@classmethod
def default_version(cls, cc):
"""Override just this to override all compiler version functions."""
@ -226,7 +315,7 @@ def __repr__(self):
def __str__(self):
"""Return a string represntation of the compiler toolchain."""
"""Return a string representation of the compiler toolchain."""
return "%s(%s)" % (
self.name, '\n '.join((str(s) for s in (self.cc, self.cxx, self.f77, self.fc, self.modules, str(self.operating_system)))))

25
lib/spack/spack/compilers/__init__.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""This module contains functions related to finding compilers on the
system and configuring Spack to use multiple compilers.
@ -53,7 +53,6 @@
_path_instance_vars = ['cc', 'cxx', 'f77', 'fc']
_other_instance_vars = ['modules', 'operating_system']
_default_order = []
# TODO: customize order in config file
if platform.system() == 'Darwin':
_default_order = ['clang', 'gcc', 'intel']
@ -257,7 +256,15 @@ def get_compilers(cspec):
compilers.append(cls(cspec, operating_system, compiler_paths, mods, alias))
#ifdef NEW
flags = {}
for f in spack.spec.FlagMap.valid_compiler_flags():
if f in items:
flags[f] = items[f]
return cls(cspec, *compiler_paths, **flags)
#else /* not NEW */
return compilers
#endif /* not NEW */
matches = set(find(compiler_spec, scope))
compilers = []

41
lib/spack/spack/compilers/clang.py
View File

@ -1,31 +1,33 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import re
import spack.compiler as cpr
from spack.compiler import *
from spack.util.executable import *
import llnl.util.tty as tty
from spack.version import ver
class Clang(Compiler):
# Subclasses use possible names of C compiler
@ -47,6 +49,29 @@ class Clang(Compiler):
'f77' : 'f77',
'fc' : 'f90' }
@property
def is_apple(self):
ver_string = str(self.version)
return ver_string.endswith('-apple')
@property
def openmp_flag(self):
if self.is_apple:
tty.die("Clang from Apple does not support Openmp yet.")
else:
return "-fopenmp"
@property
def cxx11_flag(self):
if self.is_apple:
# FIXME: figure out from which version Apple's clang supports c++11
return "-std=c++11"
else:
if self.version < ver('3.3'):
tty.die("Only Clang 3.3 and above support c++11.")
else:
return "-std=c++11"
@classmethod
def default_version(cls, comp):
"""The '--version' option works for clang compilers.

34
lib/spack/spack/compilers/gcc.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import llnl.util.tty as tty
from spack.compiler import *
@ -40,7 +40,8 @@ class Gcc(Compiler):
fc_names = ['gfortran']
# MacPorts builds gcc versions with prefixes and -mp-X.Y suffixes.
suffixes = [r'-mp-\d\.\d']
# Homebrew and Linuxes may build gcc with -X, -X.Y suffixes
suffixes = [r'-mp-\d\.\d', r'-\d\.\d', r'-\d']
# Named wrapper links within spack.build_env_path
link_paths = {'cc' : 'gcc/gcc',
@ -51,14 +52,25 @@ class Gcc(Compiler):
PrgEnv = 'PrgEnv-gnu'
PrgEnv_compiler = 'gcc'
@property
def openmp_flag(self):
return "-fopenmp"
@property
def cxx11_flag(self):
if self.version < ver('4.3'):
tty.die("Only gcc 4.3 and above support c++11.")
elif self.version < ver('4.7'):
return "-std=gnu++0x"
return "-std=c++0x"
else:
return "-std=gnu++11"
return "-std=c++11"
@property
def cxx14_flag(self):
if self.version < ver('4.8'):
tty.die("Only gcc 4.8 and above support c++14.")
else:
return "-std=c++14"
@classmethod
def fc_version(cls, fc):

27
lib/spack/spack/compilers/intel.py
View File

@ -1,28 +1,30 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack.compiler import *
import llnl.util.tty as tty
from spack.version import ver
class Intel(Compiler):
# Subclasses use possible names of C compiler
@ -46,6 +48,13 @@ class Intel(Compiler):
PrgEnv = 'PrgEnv-intel'
PrgEnv_compiler = 'intel'
@property
def openmp_flag(self):
if self.version < ver('16.0'):
return "-openmp"
else:
return "-qopenmp"
@property
def cxx11_flag(self):
if self.version < ver('11.1'):
@ -71,5 +80,3 @@ def default_version(cls, comp):
"""
return get_compiler_version(
comp, '--version', r'\((?:IFORT|ICC)\) ([^ ]+)')

46
lib/spack/spack/compilers/nag.py
View File

@ -1,4 +1,29 @@
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack.compiler import *
import llnl.util.tty as tty
class Nag(Compiler):
# Subclasses use possible names of C compiler
@ -20,6 +45,27 @@ class Nag(Compiler):
'f77' : 'nag/nagfor',
'fc' : 'nag/nagfor' }
@property
def openmp_flag(self):
return "-openmp"
@property
def cxx11_flag(self):
# NAG does not have a C++ compiler
# However, it can be mixed with a compiler that does support it
return "-std=c++11"
# Unlike other compilers, the NAG compiler passes options to GCC, which
# then passes them to the linker. Therefore, we need to doubly wrap the
# options with '-Wl,-Wl,,'
@property
def f77_rpath_arg(self):
return '-Wl,-Wl,,-rpath,'
@property
def fc_rpath_arg(self):
return '-Wl,-Wl,,-rpath,'
@classmethod
def default_version(self, comp):
"""The '-V' option works for nag compilers.

30
lib/spack/spack/compilers/pgi.py
View File

@ -1,28 +1,29 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack.compiler import *
import llnl.util.tty as tty
class Pgi(Compiler):
# Subclasses use possible names of C compiler
@ -43,9 +44,21 @@ class Pgi(Compiler):
'f77' : 'pgi/pgfortran',
'fc' : 'pgi/pgfortran' }
#ifdef NEW
@property
def openmp_flag(self):
return "-mp"
@property
def cxx11_flag(self):
return "-std=c++11"
#else /* not NEW */
PrgEnv = 'PrgEnv-pgi'
PrgEnv_compiler = 'pgi'
#endif /* not NEW */
@classmethod
def default_version(cls, comp):
"""The '-V' option works for all the PGI compilers.
@ -57,4 +70,3 @@ def default_version(cls, comp):
"""
return get_compiler_version(
comp, '-V', r'pg[^ ]* ([^ ]+) \d\d\d?-bit target')

23
lib/spack/spack/compilers/xl.py
View File

@ -1,29 +1,30 @@
# -*- coding: utf-8 -*-
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by François Bissey, francois.bissey@canterbury.ac.nz, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack.compiler import *
import llnl.util.tty as tty
from spack.version import ver
class Xl(Compiler):
# Subclasses use possible names of C compiler
@ -44,6 +45,10 @@ class Xl(Compiler):
'f77' : 'xl/xlf',
'fc' : 'xl/xlf90' }
@property
def openmp_flag(self):
return "-qsmp=omp"
@property
def cxx11_flag(self):
if self.version < ver('13.1'):

234
lib/spack/spack/concretize.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""
Functions here are used to take abstract specs and make them concrete.
@ -33,20 +33,18 @@
TODO: make this customizable and allow users to configure
concretization policies.
"""
import collections
from llnl.util.filesystem import join_path
import spack
import spack.spec
import spack.compilers
import spack.architecture
import spack.error
from spack.util.naming import mod_to_class
from spack.version import *
from functools import partial
from spec import DependencyMap
from itertools import chain
from spack.config import *
class DefaultConcretizer(object):
"""This class doesn't have any state, it just provides some methods for
concretization. You can subclass it to override just some of the
@ -54,10 +52,10 @@ class DefaultConcretizer(object):
"""
def _valid_virtuals_and_externals(self, spec):
"""Returns a list of spec/external-path pairs for both virtuals and externals
that can concretize this spec."""
# Get a list of candidate packages that could satisfy this spec
packages = []
"""Returns a list of candidate virtual dep providers and external
packages that coiuld be used to concretize a spec."""
# First construct a list of concrete candidates to replace spec with.
candidates = [spec]
if spec.virtual:
providers = spack.repo.providers_for(spec)
if not providers:
@ -67,106 +65,72 @@ def _valid_virtuals_and_externals(self, spec):
if not spec_w_preferred_providers:
spec_w_preferred_providers = spec
provider_cmp = partial(spack.pkgsort.provider_compare, spec_w_preferred_providers.name, spec.name)
packages = sorted(providers, cmp=provider_cmp)
else:
packages = [spec]
candidates = sorted(providers, cmp=provider_cmp)
# For each candidate package, if it has externals add those to the candidates
# if it's a nobuild, then only add the externals.
result = []
all_compilers = spack.compilers.all_compilers()
for pkg in packages:
externals = spec_externals(pkg)
buildable = not is_spec_nobuild(pkg)
if buildable:
result.append((pkg, None, None))
# For each candidate package, if it has externals, add those to the usable list.
# if it's not buildable, then *only* add the externals.
usable = []
for cspec in candidates:
if is_spec_buildable(cspec):
usable.append(cspec)
externals = spec_externals(cspec)
for ext in externals:
if ext[0].satisfies(spec):
result.append(ext)
# if externals:
# sorted_externals = sorted(externals, cmp=lambda a,b: a[0].__cmp__(b[0]))
# for external in sorted_externals:
# if external[0].satisfies(spec):
# result.append(external)
if not result:
if ext.satisfies(spec):
usable.append(ext)
# If nothing is in the usable list now, it's because we aren't
# allowed to build anything.
if not usable:
raise NoBuildError(spec)
def cmp_externals(a, b):
result = cmp_specs(a[0], b[0])
if a.name != b.name:
# We're choosing between different providers, so
# maintain order from provider sort
return candidates.index(a) - candidates.index(b)
result = cmp_specs(a, b)
if result != 0:
return result
if not a[1] and b[1]:
return 1
if not b[1] and a[1]:
return -1
return cmp_specs(a[1], b[1])
result = sorted(result, cmp=cmp_externals)
return result
# prefer external packages to internal packages.
if a.external is None or b.external is None:
return -cmp(a.external, b.external)
else:
return cmp(a.external, b.external)
usable.sort(cmp=cmp_externals)
return usable
def concretize_virtual_and_external(self, spec):
"""From a list of candidate virtual and external packages, concretize to one that
is ABI compatible with the rest of the DAG."""
def choose_virtual_or_external(self, spec):
"""Given a list of candidate virtual and external packages, try to
find one that is most ABI compatible.
"""
candidates = self._valid_virtuals_and_externals(spec)
if not candidates:
return False
return candidates
# Find the nearest spec in the dag that has a compiler. We'll use that
# spec to test compiler compatibility.
other_spec = find_spec(spec, lambda(x): x.compiler)
if not other_spec:
other_spec = spec.root
# Find the nearest spec in the dag that has a compiler. We'll
# use that spec to calibrate compiler compatibility.
abi_exemplar = find_spec(spec, lambda(x): x.compiler)
if not abi_exemplar:
abi_exemplar = spec.root
# Choose an ABI-compatible candidate, or the first match otherwise.
candidate = None
if other_spec:
candidate = next((c for c in candidates if spack.abi.compatible(c[0], other_spec)), None)
if not candidate:
# Try a looser ABI matching
candidate = next((c for c in candidates if spack.abi.compatible(c[0], other_spec, loose=True)), None)
if not candidate:
# No ABI matches. Pick the top choice based on the orignal preferences.
candidate = candidates[0]
# Make a list including ABI compatibility of specs with the exemplar.
strict = [spack.abi.compatible(c, abi_exemplar) for c in candidates]
loose = [spack.abi.compatible(c, abi_exemplar, loose=True) for c in candidates]
keys = zip(strict, loose, candidates)
external_module = candidate[2]
external = candidate[1]
candidate_spec = candidate[0]
changed = False
# Sort candidates from most to least compatibility.
# Note:
# 1. We reverse because True > False.
# 2. Sort is stable, so c's keep their order.
keys.sort(key=lambda k:k[:2], reverse=True)
# If we're external then trim the dependencies
if external:
if (spec.dependencies):
changed = True
spec.dependencies = DependencyMap()
candidate_spec.dependencies = DependencyMap()
def fequal(candidate_field, spec_field):
return (not candidate_field) or (candidate_field == spec_field)
if (fequal(candidate_spec.name, spec.name) and
fequal(candidate_spec.versions, spec.versions) and
fequal(candidate_spec.compiler, spec.compiler) and
fequal(candidate_spec.architecture, spec.architecture) and
fequal(candidate_spec.dependencies, spec.dependencies) and
fequal(candidate_spec.variants, spec.variants) and
fequal(external, spec.external)):
return changed
# Refine this spec to the candidate.
if spec.virtual:
spec._replace_with(candidate_spec)
changed = True
if spec._dup(candidate_spec, deps=False, cleardeps=False):
changed = True
if not spec.external and external:
spec.external = external
changed = True
if not spec.external_module and external_module:
spec.external_module = external_module
changed = True
return changed
# Pull the candidates back out and return them in order
candidates = [c for s,l,c in keys]
return candidates
def concretize_version(self, spec):
@ -189,13 +153,17 @@ def concretize_version(self, spec):
# If there are known available versions, return the most recent
# version that satisfies the spec
pkg = spec.package # Gives error here with dynist
pkg = spec.package
cmp_versions = partial(spack.pkgsort.version_compare, spec.name)
valid_versions = sorted(
[v for v in pkg.versions
if any(v.satisfies(sv) for sv in spec.versions)],
cmp=cmp_versions)
def prefer_key(v):
return pkg.versions.get(Version(v)).get('preferred', False)
valid_versions.sort(key=prefer_key, reverse=True)
if valid_versions:
spec.versions = ver([valid_versions[0]])
else:
@ -272,7 +240,7 @@ def concretize_variants(self, spec):
the default variants from the package specification.
"""
changed = False
for name, variant in spec.package.variants.items():
for name, variant in spec.package_class.variants.items():
if name not in spec.variants:
spec.variants[name] = spack.spec.VariantSpec(name, variant.default)
changed = True
@ -314,7 +282,11 @@ def _proper_compiler_style(cspec, architecture):
return False
#Find the another spec that has a compiler, or the root if none do
#ifdef NEW
other_spec = spec if spec.compiler else find_spec(spec, lambda(x) : x.compiler)
#else /* not NEW */
other_spec = find_spec(spec, lambda(x) : x.compiler)
#endif /* not NEW */
if not other_spec:
other_spec = spec.root
other_compiler = other_spec.compiler
@ -343,6 +315,59 @@ def _proper_compiler_style(cspec, architecture):
return True # things changed.
def concretize_compiler_flags(self, spec):
"""
The compiler flags are updated to match those of the spec whose
compiler is used, defaulting to no compiler flags in the spec.
Default specs set at the compiler level will still be added later.
"""
ret = False
for flag in spack.spec.FlagMap.valid_compiler_flags():
try:
nearest = next(p for p in spec.traverse(direction='parents')
if ((p.compiler == spec.compiler and p is not spec)
and flag in p.compiler_flags))
if ((not flag in spec.compiler_flags) or
sorted(spec.compiler_flags[flag]) != sorted(nearest.compiler_flags[flag])):
if flag in spec.compiler_flags:
spec.compiler_flags[flag] = list(set(spec.compiler_flags[flag]) |
set(nearest.compiler_flags[flag]))
else:
spec.compiler_flags[flag] = nearest.compiler_flags[flag]
ret = True
except StopIteration:
if (flag in spec.root.compiler_flags and ((not flag in spec.compiler_flags) or
sorted(spec.compiler_flags[flag]) != sorted(spec.root.compiler_flags[flag]))):
if flag in spec.compiler_flags:
spec.compiler_flags[flag] = list(set(spec.compiler_flags[flag]) |
set(spec.root.compiler_flags[flag]))
else:
spec.compiler_flags[flag] = spec.root.compiler_flags[flag]
ret = True
else:
if not flag in spec.compiler_flags:
spec.compiler_flags[flag] = []
# Include the compiler flag defaults from the config files
# This ensures that spack will detect conflicts that stem from a change
# in default compiler flags.
compiler = spack.compilers.compiler_for_spec(spec.compiler)
for flag in compiler.flags:
if flag not in spec.compiler_flags:
spec.compiler_flags[flag] = compiler.flags[flag]
if compiler.flags[flag] != []:
ret = True
else:
if ((sorted(spec.compiler_flags[flag]) != sorted(compiler.flags[flag])) and
(not set(spec.compiler_flags[flag]) >= set(compiler.flags[flag]))):
ret = True
spec.compiler_flags[flag] = list(set(spec.compiler_flags[flag]) |
set(compiler.flags[flag]))
return ret
def find_spec(spec, condition):
"""Searches the dag from spec in an intelligent order and looks
for a spec that matches a condition"""
@ -366,7 +391,7 @@ def find_spec(spec, condition):
if condition(spec):
return spec
return None # Nohting matched the condition.
return None # Nothing matched the condition.
def cmp_specs(lhs, rhs):
@ -404,7 +429,6 @@ def cmp_specs(lhs, rhs):
return 0
class UnavailableCompilerVersionError(spack.error.SpackError):
"""Raised when there is no available compiler that satisfies a
compiler spec."""
@ -423,8 +447,8 @@ def __init__(self, spec):
class NoBuildError(spack.error.SpackError):
"""Raised when a package is configured with the nobuild option, but
"""Raised when a package is configured with the buildable option False, but
no satisfactory external versions can be found"""
def __init__(self, spec):
super(NoBuildError, self).__init__(
"The spec '%s' is configured as nobuild, and no matching external installs were found" % spec.name)
"The spec '%s' is configured as not buildable, and no matching external installs were found" % spec.name)

245
lib/spack/spack/config.py
View File

@ -1,26 +1,27 @@
# flake8: noqa
##############################################################################
# Copyright (c) 2013-2015, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""This module implements Spack's configuration file handling.
@ -117,22 +118,20 @@
the site configuration will be ignored.
"""
import copy
import os
import re
import sys
import copy
import jsonschema
from jsonschema import Draft4Validator, validators
import yaml
from yaml.error import MarkedYAMLError
from ordereddict_backport import OrderedDict
import llnl.util.tty as tty
from llnl.util.filesystem import mkdirp
import copy
import spack
import yaml
from jsonschema import Draft4Validator, validators
from llnl.util.filesystem import mkdirp
from ordereddict_backport import OrderedDict
from spack.error import SpackError
from yaml.error import MarkedYAMLError
# Hacked yaml for configuration files preserves line numbers.
import spack.util.spack_yaml as syaml
@ -146,7 +145,7 @@
'type': 'object',
'additionalProperties': False,
'patternProperties': {
'compilers:?': { # optional colon for overriding site config.
'compilers:?': { # optional colon for overriding site config.
'type': 'object',
'default': {},
'additionalProperties': False,
@ -230,16 +229,20 @@
'items' : { 'anyOf' : [ { 'type' : 'string' },
{ 'type' : 'number'}]}}, #version strings
'compiler': {
'typee' : 'array',
'type' : 'array',
'default' : [],
'items' : { 'type' : 'string' } }, #compiler specs
'nobuild': {
'buildable': {
'type': 'boolean',
#ifdef NEW
'default': True,
#else /* not NEW */
'default': False,
},
'module': {
'anyOf' : [{'type': 'string'},
{'type': 'null'}]
#endif /* not NEW */
},
'providers': {
'type': 'object',
@ -254,7 +257,125 @@
'type' : 'object',
'default' : {},
}
},},},},},}
},},},},},},
'modules': {
'$schema': 'http://json-schema.org/schema#',
'title': 'Spack module file configuration file schema',
'type': 'object',
'additionalProperties': False,
'definitions': {
'array_of_strings': {
'type': 'array',
'default': [],
'items': {
'type': 'string'
}
},
'dictionary_of_strings': {
'type': 'object',
'patternProperties': {
r'\w[\w-]*': { # key
'type': 'string'
}
}
},
'dependency_selection': {
'type': 'string',
'enum': ['none', 'direct', 'all']
},
'module_file_configuration': {
'type': 'object',
'default': {},
'additionalProperties': False,
'properties': {
'filter': {
'type': 'object',
'default': {},
'additionalProperties': False,
'properties': {
'environment_blacklist': {
'type': 'array',
'default': [],
'items': {
'type': 'string'
}
}
}
},
'autoload': {'$ref': '#/definitions/dependency_selection'},
'prerequisites': {'$ref': '#/definitions/dependency_selection'},
'conflict': {'$ref': '#/definitions/array_of_strings'},
'environment': {
'type': 'object',
'default': {},
'additionalProperties': False,
'properties': {
'set': {'$ref': '#/definitions/dictionary_of_strings'},
'unset': {'$ref': '#/definitions/array_of_strings'},
'prepend_path': {'$ref': '#/definitions/dictionary_of_strings'},
'append_path': {'$ref': '#/definitions/dictionary_of_strings'}
}
}
}
},
'module_type_configuration': {
'type': 'object',
'default': {},
'anyOf': [
{
'properties': {
'whitelist': {'$ref': '#/definitions/array_of_strings'},
'blacklist': {'$ref': '#/definitions/array_of_strings'},
'naming_scheme': {
'type': 'string' # Can we be more specific here?
}
}
},
{
'patternProperties': {r'\w[\w-]*': {'$ref': '#/definitions/module_file_configuration'}}
}
]
}
},
'patternProperties': {
r'modules:?': {
'type': 'object',
'default': {},
'additionalProperties': False,
'properties': {
'prefix_inspections': {
'type': 'object',
'patternProperties': {
r'\w[\w-]*': { # path to be inspected for existence (relative to prefix)
'$ref': '#/definitions/array_of_strings'
}
}
},
'enable': {
'type': 'array',
'default': [],
'items': {
'type': 'string',
'enum': ['tcl', 'dotkit']
}
},
'tcl': {
'allOf': [
{'$ref': '#/definitions/module_type_configuration'}, # Base configuration
{} # Specific tcl extensions
]
},
'dotkit': {
'allOf': [
{'$ref': '#/definitions/module_type_configuration'}, # Base configuration
{} # Specific dotkit extensions
]
},
}
},
},
},
}
"""OrderedDict of config scopes keyed by name.
@ -264,10 +385,10 @@
def validate_section_name(section):
"""Raise a ValueError if the section is not a valid section."""
"""Exit if the section is not a valid section."""
if section not in section_schemas:
raise ValueError("Invalid config section: '%s'. Options are %s"
% (section, section_schemas))
tty.die("Invalid config section: '%s'. Options are: %s"
% (section, " ".join(section_schemas.keys())))
def extend_with_default(validator_class):
@ -301,13 +422,14 @@ def set_pp_defaults(validator, properties, instance, schema):
yield err
return validators.extend(validator_class, {
"properties" : set_defaults,
"patternProperties" : set_pp_defaults
"properties": set_defaults,
"patternProperties": set_pp_defaults
})
DefaultSettingValidator = extend_with_default(Draft4Validator)
def validate_section(data, schema):
"""Validate data read in from a Spack YAML file.
@ -342,16 +464,14 @@ def get_section_filename(self, section):
validate_section_name(section)
return os.path.join(self.path, "%s.yaml" % section)
def get_section(self, section):
if not section in self.sections:
if section not in self.sections:
path = self.get_section_filename(section)
schema = section_schemas[section]
data = _read_config_file(path, schema)
self.sections[section] = data
return self.sections[section]
def write_section(self, section):
filename = self.get_section_filename(section)
data = self.get_section(section)
@ -365,7 +485,6 @@ def write_section(self, section):
except (yaml.YAMLError, IOError) as e:
raise ConfigFileError("Error writing to config file: '%s'" % str(e))
def clear(self):
"""Empty cached config information."""
self.sections = {}
@ -408,7 +527,7 @@ def _read_config_file(filename, schema):
elif not os.path.isfile(filename):
raise ConfigFileError(
"Invlaid configuration. %s exists but is not a file." % filename)
"Invalid configuration. %s exists but is not a file." % filename)
elif not os.access(filename, os.R_OK):
raise ConfigFileError("Config file is not readable: %s" % filename)
@ -422,11 +541,11 @@ def _read_config_file(filename, schema):
validate_section(data, schema)
return data
except MarkedYAMLError, e:
except MarkedYAMLError as e:
raise ConfigFileError(
"Error parsing yaml%s: %s" % (str(e.context_mark), e.problem))
except IOError, e:
except IOError as e:
raise ConfigFileError(
"Error reading configuration file %s: %s" % (filename, str(e)))
@ -471,7 +590,7 @@ def they_are(t):
# Source dict is merged into dest.
elif they_are(dict):
for sk, sv in source.iteritems():
if not sk in dest:
if sk not in dest:
dest[sk] = copy.copy(sv)
else:
dest[sk] = _merge_yaml(dest[sk], source[sk])
@ -534,14 +653,19 @@ def update_config(section, update_data, scope=None):
other yaml-ish structure.
"""
# read in the config to ensure we've got current data
get_config(section)
validate_section_name(section) # validate section name
scope = validate_scope(scope) # get ConfigScope object from string.
validate_section_name(section) # validate section name
scope = validate_scope(scope) # get ConfigScope object from string.
# read in the config to ensure we've got current data
configuration = get_config(section)
if isinstance(update_data, list):
configuration = update_data
else:
configuration.update(update_data)
# read only the requested section's data.
scope.sections[section] = { section : update_data }
scope.sections[section] = {section: configuration}
scope.write_section(section)
@ -556,19 +680,27 @@ def print_section(section):
def spec_externals(spec):
"""Return a list of spec, directory pairs for each external location for spec"""
"""Return a list of external specs (with external directory path filled in),
one for each known external installation."""
allpkgs = get_config('packages')
name = spec.name
spec_locations = []
external_specs = []
pkg_paths = allpkgs.get(name, {}).get('paths', None)
if not pkg_paths:
return []
for pkg,path in pkg_paths.iteritems():
if not spec.satisfies(pkg):
for external_spec, path in pkg_paths.iteritems():
if not path:
# skip entries without paths (avoid creating extra Specs)
continue
#ifdef NEW
external_spec = spack.spec.Spec(external_spec, external=path)
if external_spec.satisfies(spec):
external_specs.append(external_spec)
return external_specs
#else /* not NEW */
module = allpkgs.get(pkg, {}).get('module', None)
if not path:
if not module:
@ -576,21 +708,26 @@ def spec_externals(spec):
path = get_path_from_module(module)
spec_locations.append( (spack.spec.Spec(pkg), path, module) )
return spec_locations
#endif /* not NEW */
def is_spec_nobuild(spec):
"""Return true if the spec pkgspec is configured as nobuild"""
def is_spec_buildable(spec):
"""Return true if the spec pkgspec is configured as buildable"""
allpkgs = get_config('packages')
name = spec.name
if not spec.name in allpkgs:
return False
if not 'nobuild' in allpkgs[spec.name]:
return False
return allpkgs[spec.name]['nobuild']
if spec.name not in allpkgs:
return True
if 'buildable' not in allpkgs[spec.name]:
return True
return allpkgs[spec.name]['buildable']
class ConfigError(SpackError): pass
class ConfigFileError(ConfigError): pass
class ConfigError(SpackError):
pass
class ConfigFileError(ConfigError):
pass
def get_path(path, data):
if path:
@ -598,6 +735,7 @@ def get_path(path, data):
else:
return data
class ConfigFormatError(ConfigError):
"""Raised when a configuration format does not match its schema."""
def __init__(self, validation_error, data):
@ -632,5 +770,6 @@ def __init__(self, validation_error, data):
message = '%s: %s' % (location, validation_error.message)
super(ConfigError, self).__init__(message)
class ConfigSanityError(ConfigFormatError):
"""Same as ConfigFormatError, raised when config is written by Spack."""

52
lib/spack/spack/database.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013-2015, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""Spack's installation tracking database.
@ -60,7 +60,7 @@
_db_dirname = '.spack-db'
# DB version. This is stuck in the DB file to track changes in format.
_db_version = Version('0.9')
_db_version = Version('0.9.1')
# Default timeout for spack database locks is 5 min.
_db_lock_timeout = 60
@ -92,22 +92,24 @@ class InstallRecord(object):
dependents left.
"""
def __init__(self, spec, path, installed, ref_count=0):
def __init__(self, spec, path, installed, ref_count=0, explicit=False):
self.spec = spec
self.path = str(path)
self.installed = bool(installed)
self.ref_count = ref_count
self.explicit = explicit
def to_dict(self):
return { 'spec' : self.spec.to_node_dict(),
'path' : self.path,
'installed' : self.installed,
'ref_count' : self.ref_count }
'ref_count' : self.ref_count,
'explicit' : self.explicit }
@classmethod
def from_dict(cls, spec, dictionary):
d = dictionary
return InstallRecord(spec, d['path'], d['installed'], d['ref_count'])
return InstallRecord(spec, d['path'], d['installed'], d['ref_count'], d.get('explicit', False))
class Database(object):
@ -203,6 +205,11 @@ def _read_spec_from_yaml(self, hash_key, installs, parent_key=None):
spec_dict = installs[hash_key]['spec']
# Install records don't include hash with spec, so we add it in here
# to ensure it is read properly.
for name in spec_dict:
spec_dict[name]['hash'] = hash_key
# Build spec from dict first.
spec = Spec.from_node_dict(spec_dict)
@ -248,13 +255,18 @@ def check(cond, msg):
check('installs' in db, "No 'installs' in YAML DB.")
check('version' in db, "No 'version' in YAML DB.")
installs = db['installs']
# TODO: better version checking semantics.
version = Version(db['version'])
if version != _db_version:
if version > _db_version:
raise InvalidDatabaseVersionError(_db_version, version)
elif version < _db_version:
self.reindex(spack.install_layout)
installs = dict((k, v.to_dict()) for k, v in self._data.items())
# Iterate through database and check each record.
installs = db['installs']
data = {}
for hash_key, rec in installs.items():
try:
@ -370,7 +382,7 @@ def _read(self):
self.reindex(spack.install_layout)
def _add(self, spec, path, directory_layout=None):
def _add(self, spec, path, directory_layout=None, explicit=False):
"""Add an install record for spec at path to the database.
This assumes that the spec is not already installed. It
@ -392,7 +404,7 @@ def _add(self, spec, path, directory_layout=None):
rec.path = path
else:
self._data[key] = InstallRecord(spec, path, True)
self._data[key] = InstallRecord(spec, path, True, explicit=explicit)
for dep in spec.dependencies.values():
self._increment_ref_count(dep, directory_layout)
@ -415,7 +427,7 @@ def _increment_ref_count(self, spec, directory_layout=None):
self._data[key].ref_count += 1
@_autospec
def add(self, spec, path):
def add(self, spec, path, explicit=False):
"""Add spec at path to database, locking and reading DB to sync.
``add()`` will lock and read from the DB on disk.
@ -424,7 +436,7 @@ def add(self, spec, path):
# TODO: ensure that spec is concrete?
# Entire add is transactional.
with self.write_transaction():
self._add(spec, path)
self._add(spec, path, explicit=explicit)
def _get_matching_spec_key(self, spec, **kwargs):
@ -513,7 +525,7 @@ def installed_extensions_for(self, extendee_spec):
# TODO: conditional way to do this instead of catching exceptions
def query(self, query_spec=any, known=any, installed=True):
def query(self, query_spec=any, known=any, installed=True, explicit=any):
"""Run a query on the database.
``query_spec``
@ -553,6 +565,8 @@ def query(self, query_spec=any, known=any, installed=True):
for key, rec in self._data.items():
if installed is not any and rec.installed != installed:
continue
if explicit is not any and rec.explicit != explicit:
continue
if known is not any and spack.repo.exists(rec.spec.name) != known:
continue
if query_spec is any or rec.spec.satisfies(query_spec):

65
lib/spack/spack/directives.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""This package contains directives that can be used within a package.
@ -45,11 +45,8 @@ class OpenMpi(Package):
* ``resource``
"""
__all__ = ['depends_on', 'extends', 'provides', 'patch', 'version',
'variant', 'resource']
import re
import inspect
import os.path
import functools
@ -67,6 +64,9 @@ class OpenMpi(Package):
from spack.resource import Resource
from spack.fetch_strategy import from_kwargs
__all__ = ['depends_on', 'extends', 'provides', 'patch', 'version', 'variant',
'resource']
#
# This is a list of all directives, built up as they are defined in
# this file.
@ -122,15 +122,14 @@ class Foo(Package):
def __init__(self, dicts=None):
if isinstance(dicts, basestring):
dicts = (dicts,)
dicts = (dicts, )
elif type(dicts) not in (list, tuple):
raise TypeError(
"dicts arg must be list, tuple, or string. Found %s"
% type(dicts))
"dicts arg must be list, tuple, or string. Found %s" %
type(dicts))
self.dicts = dicts
def ensure_dicts(self, pkg):
"""Ensure that a package has the dicts required by this directive."""
for d in self.dicts:
@ -142,7 +141,6 @@ def ensure_dicts(self, pkg):
raise spack.error.SpackError(
"Package %s has non-dict %s attribute!" % (pkg, d))
def __call__(self, directive_function):
directives[directive_function.__name__] = self
@ -263,7 +261,8 @@ def variant(pkg, name, default=False, description=""):
description = str(description).strip()
if not re.match(spack.spec.identifier_re, name):
raise DirectiveError("Invalid variant name in %s: '%s'" % (pkg.name, name))
raise DirectiveError("Invalid variant name in %s: '%s'" %
(pkg.name, name))
pkg.variants[name] = Variant(default, description)
@ -271,31 +270,37 @@ def variant(pkg, name, default=False, description=""):
@directive('resources')
def resource(pkg, **kwargs):
"""
Define an external resource to be fetched and staged when building the package. Based on the keywords present in the
dictionary the appropriate FetchStrategy will be used for the resource. Resources are fetched and staged in their
own folder inside spack stage area, and then linked into the stage area of the package that needs them.
Define an external resource to be fetched and staged when building the
package. Based on the keywords present in the dictionary the appropriate
FetchStrategy will be used for the resource. Resources are fetched and
staged in their own folder inside spack stage area, and then linked into
the stage area of the package that needs them.
List of recognized keywords:
* 'when' : (optional) represents the condition upon which the resource is needed
* 'destination' : (optional) path where to link the resource. This path must be relative to the main package stage
area.
* 'placement' : (optional) gives the possibility to fine tune how the resource is linked into the main package stage
area.
* 'when' : (optional) represents the condition upon which the resource is
needed
* 'destination' : (optional) path where to link the resource. This path
must be relative to the main package stage area.
* 'placement' : (optional) gives the possibility to fine tune how the
resource is linked into the main package stage area.
"""
when = kwargs.get('when', pkg.name)
destination = kwargs.get('destination', "")
placement = kwargs.get('placement', None)
# Check if the path is relative
if os.path.isabs(destination):
message = "The destination keyword of a resource directive can't be an absolute path.\n"
message = "The destination keyword of a resource directive can't be"
" an absolute path.\n"
message += "\tdestination : '{dest}\n'".format(dest=destination)
raise RuntimeError(message)
# Check if the path falls within the main package stage area
test_path = 'stage_folder_root/'
normalized_destination = os.path.normpath(join_path(test_path, destination)) # Normalized absolute path
test_path = 'stage_folder_root'
normalized_destination = os.path.normpath(join_path(test_path, destination)
) # Normalized absolute path
if test_path not in normalized_destination:
message = "The destination folder of a resource must fall within the main package stage directory.\n"
message = "The destination folder of a resource must fall within the"
" main package stage directory.\n"
message += "\tdestination : '{dest}'\n".format(dest=destination)
raise RuntimeError(message)
when_spec = parse_anonymous_spec(when, pkg.name)
@ -307,6 +312,7 @@ def resource(pkg, **kwargs):
class DirectiveError(spack.error.SpackError):
"""This is raised when something is wrong with a package directive."""
def __init__(self, directive, message):
super(DirectiveError, self).__init__(message)
self.directive = directive
@ -314,6 +320,7 @@ def __init__(self, directive, message):
class CircularReferenceError(DirectiveError):
"""This is raised when something depends on itself."""
def __init__(self, directive, package):
super(CircularReferenceError, self).__init__(
directive,

18
lib/spack/spack/directory_layout.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import re
import os
@ -150,7 +150,7 @@ def remove_install_directory(self, spec):
if os.path.exists(path):
try:
shutil.rmtree(path)
except exceptions.OSError, e:
except exceptions.OSError as e:
raise RemoveFailedError(spec, path, e)
path = os.path.dirname(path)

306
lib/spack/spack/environment.py Normal file
View File

@ -0,0 +1,306 @@
##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import collections
import inspect
import os
import os.path
class NameModifier(object):
def __init__(self, name, **kwargs):
self.name = name
self.args = {'name': name}
self.args.update(kwargs)
class NameValueModifier(object):
def __init__(self, name, value, **kwargs):
self.name = name
self.value = value
self.separator = kwargs.get('separator', ':')
self.args = {'name': name, 'value': value, 'delim': self.separator}
self.args.update(kwargs)
class SetEnv(NameValueModifier):
def execute(self):
os.environ[self.name] = str(self.value)
class UnsetEnv(NameModifier):
def execute(self):
# Avoid throwing if the variable was not set
os.environ.pop(self.name, None)
class SetPath(NameValueModifier):
def execute(self):
string_path = concatenate_paths(self.value, separator=self.separator)
os.environ[self.name] = string_path
class AppendPath(NameValueModifier):
def execute(self):
environment_value = os.environ.get(self.name, '')
directories = environment_value.split(
self.separator) if environment_value else []
directories.append(os.path.normpath(self.value))
os.environ[self.name] = self.separator.join(directories)
class PrependPath(NameValueModifier):
def execute(self):
environment_value = os.environ.get(self.name, '')
directories = environment_value.split(
self.separator) if environment_value else []
directories = [os.path.normpath(self.value)] + directories
os.environ[self.name] = self.separator.join(directories)
class RemovePath(NameValueModifier):
def execute(self):
environment_value = os.environ.get(self.name, '')
directories = environment_value.split(
self.separator) if environment_value else []
directories = [os.path.normpath(x) for x in directories
if x != os.path.normpath(self.value)]
os.environ[self.name] = self.separator.join(directories)
class EnvironmentModifications(object):
"""
Keeps track of requests to modify the current environment.
Each call to a method to modify the environment stores the extra
information on the caller in the request:
- 'filename' : filename of the module where the caller is defined
- 'lineno': line number where the request occurred
- 'context' : line of code that issued the request that failed
"""
def __init__(self, other=None):
"""
Initializes a new instance, copying commands from other if not None
Args:
other: another instance of EnvironmentModifications (optional)
"""
self.env_modifications = []
if other is not None:
self.extend(other)
def __iter__(self):
return iter(self.env_modifications)
def __len__(self):
return len(self.env_modifications)
def extend(self, other):
self._check_other(other)
self.env_modifications.extend(other.env_modifications)
@staticmethod
def _check_other(other):
if not isinstance(other, EnvironmentModifications):
raise TypeError(
'other must be an instance of EnvironmentModifications')
def _get_outside_caller_attributes(self):
stack = inspect.stack()
try:
_, filename, lineno, _, context, index = stack[2]
context = context[index].strip()
except Exception:
filename = 'unknown file'
lineno = 'unknown line'
context = 'unknown context'
args = {'filename': filename, 'lineno': lineno, 'context': context}
return args
def set(self, name, value, **kwargs):
"""
Stores in the current object a request to set an environment variable
Args:
name: name of the environment variable to be set
value: value of the environment variable
"""
kwargs.update(self._get_outside_caller_attributes())
item = SetEnv(name, value, **kwargs)
self.env_modifications.append(item)
def unset(self, name, **kwargs):
"""
Stores in the current object a request to unset an environment variable
Args:
name: name of the environment variable to be set
"""
kwargs.update(self._get_outside_caller_attributes())
item = UnsetEnv(name, **kwargs)
self.env_modifications.append(item)
def set_path(self, name, elts, **kwargs):
"""
Stores a request to set a path generated from a list.
Args:
name: name o the environment variable to be set.
elts: elements of the path to set.
"""
kwargs.update(self._get_outside_caller_attributes())
item = SetPath(name, elts, **kwargs)
self.env_modifications.append(item)
def append_path(self, name, path, **kwargs):
"""
Stores in the current object a request to append a path to a path list
Args:
name: name of the path list in the environment
path: path to be appended
"""
kwargs.update(self._get_outside_caller_attributes())
item = AppendPath(name, path, **kwargs)
self.env_modifications.append(item)
def prepend_path(self, name, path, **kwargs):
"""
Same as `append_path`, but the path is pre-pended
Args:
name: name of the path list in the environment
path: path to be pre-pended
"""
kwargs.update(self._get_outside_caller_attributes())
item = PrependPath(name, path, **kwargs)
self.env_modifications.append(item)
def remove_path(self, name, path, **kwargs):
"""
Stores in the current object a request to remove a path from a path
list
Args:
name: name of the path list in the environment
path: path to be removed
"""
kwargs.update(self._get_outside_caller_attributes())
item = RemovePath(name, path, **kwargs)
self.env_modifications.append(item)
def group_by_name(self):
"""
Returns a dict of the modifications grouped by variable name
Returns:
dict mapping the environment variable name to the modifications to
be done on it
"""
modifications = collections.defaultdict(list)
for item in self:
modifications[item.name].append(item)
return modifications
def clear(self):
"""
Clears the current list of modifications
"""
self.env_modifications.clear()
def apply_modifications(self):
"""
Applies the modifications and clears the list
"""
modifications = self.group_by_name()
# Apply modifications one variable at a time
for name, actions in sorted(modifications.items()):
for x in actions:
x.execute()
def concatenate_paths(paths, separator=':'):
"""
Concatenates an iterable of paths into a string of paths separated by
separator, defaulting to colon
Args:
paths: iterable of paths
separator: the separator to use, default ':'
Returns:
string
"""
return separator.join(str(item) for item in paths)
def set_or_unset_not_first(variable, changes, errstream):
"""
Check if we are going to set or unset something after other modifications
have already been requested
"""
indexes = [ii for ii, item in enumerate(changes)
if ii != 0 and type(item) in [SetEnv, UnsetEnv]]
if indexes:
good = '\t \t{context} at {filename}:{lineno}'
nogood = '\t--->\t{context} at {filename}:{lineno}'
message = 'Suspicious requests to set or unset the variable \'{var}\' found' # NOQA: ignore=E501
errstream(message.format(var=variable))
for ii, item in enumerate(changes):
print_format = nogood if ii in indexes else good
errstream(print_format.format(**item.args))
def validate(env, errstream):
"""
Validates the environment modifications to check for the presence of
suspicious patterns. Prompts a warning for everything that was found
Current checks:
- set or unset variables after other changes on the same variable
Args:
env: list of environment modifications
"""
modifications = env.group_by_name()
for variable, list_of_changes in sorted(modifications.items()):
set_or_unset_not_first(variable, list_of_changes, errstream)
def filter_environment_blacklist(env, variables):
"""
Generator that filters out any change to environment variables present in
the input list
Args:
env: list of environment modifications
variables: list of variable names to be filtered
Yields:
items in env if they are not in variables
"""
for item in env:
if item.name not in variables:
yield item

16
lib/spack/spack/error.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import os
import sys

290
lib/spack/spack/fetch_strategy.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""
Fetch strategies are used to download source code into a staging area
@ -57,7 +57,6 @@
from spack.util.compression import decompressor_for, extension
import spack.util.pattern as pattern
"""List of all fetch strategies, created by FetchStrategy metaclass."""
all_strategies = []
@ -82,13 +81,16 @@ class FetchStrategy(object):
class __metaclass__(type):
"""This metaclass registers all fetch strategies in a list."""
def __init__(cls, name, bases, dict):
type.__init__(cls, name, bases, dict)
if cls.enabled: all_strategies.append(cls)
if cls.enabled:
all_strategies.append(cls)
def __init__(self):
# The stage is initialized late, so that fetch strategies can be constructed
# at package construction time. This is where things will be fetched.
# The stage is initialized late, so that fetch strategies can be
# constructed at package construction time. This is where things
# will be fetched.
self.stage = None
def set_stage(self, stage):
@ -97,15 +99,20 @@ def set_stage(self, stage):
self.stage = stage
# Subclasses need to implement these methods
def fetch(self): pass # Return True on success, False on fail.
def fetch(self):
pass # Return True on success, False on fail.
def check(self): pass # Do checksum.
def check(self):
pass # Do checksum.
def expand(self): pass # Expand archive.
def expand(self):
pass # Expand archive.
def reset(self): pass # Revert to freshly downloaded state.
def reset(self):
pass # Revert to freshly downloaded state.
def archive(self, destination): pass # Used to create tarball for mirror.
def archive(self, destination):
pass # Used to create tarball for mirror.
def __str__(self): # Should be human readable URL.
return "FetchStrategy.__str___"
@ -139,10 +146,12 @@ def __init__(self, url=None, digest=None, **kwargs):
# If URL or digest are provided in the kwargs, then prefer
# those values.
self.url = kwargs.get('url', None)
if not self.url: self.url = url
if not self.url:
self.url = url
self.digest = kwargs.get('md5', None)
if not self.digest: self.digest = digest
if not self.digest:
self.digest = digest
self.expand_archive = kwargs.get('expand', True)
@ -157,12 +166,30 @@ def fetch(self):
tty.msg("Already downloaded %s" % self.archive_file)
return
possible_files = self.stage.expected_archive_files
save_file = None
partial_file = None
if possible_files:
save_file = self.stage.expected_archive_files[0]
partial_file = self.stage.expected_archive_files[0] + '.part'
tty.msg("Trying to fetch from %s" % self.url)
curl_args = ['-O', # save file to disk
'-f', # fail on >400 errors
'-D', '-', # print out HTML headers
'-L', self.url, ]
if partial_file:
save_args = ['-C',
'-', # continue partial downloads
'-o',
partial_file] # use a .part file
else:
save_args = ['-O']
curl_args = save_args + [
'-f', # fail on >400 errors
'-D',
'-', # print out HTML headers
'-L', # resolve 3xx redirects
self.url,
]
if sys.stdout.isatty():
curl_args.append('-#') # status bar when using a tty
@ -170,44 +197,52 @@ def fetch(self):
curl_args.append('-sS') # just errors when not.
# Run curl but grab the mime type from the http headers
headers = spack.curl(
*curl_args, output=str, fail_on_error=False)
headers = spack.curl(*curl_args, output=str, fail_on_error=False)
if spack.curl.returncode != 0:
# clean up archive on failure.
if self.archive_file:
os.remove(self.archive_file)
if partial_file and os.path.exists(partial_file):
os.remove(partial_file)
if spack.curl.returncode == 22:
# This is a 404. Curl will print the error.
raise FailedDownloadError(
self.url, "URL %s was not found!" % self.url)
self.url, "URL %s was not found!" % self.url)
elif spack.curl.returncode == 60:
# This is a certificate error. Suggest spack -k
raise FailedDownloadError(
self.url,
"Curl was unable to fetch due to invalid certificate. "
"This is either an attack, or your cluster's SSL configuration "
"is bad. If you believe your SSL configuration is bad, you "
"can try running spack -k, which will not check SSL certificates."
"Use this at your own risk.")
self.url,
"Curl was unable to fetch due to invalid certificate. "
"This is either an attack, or your cluster's SSL "
"configuration is bad. If you believe your SSL "
"configuration is bad, you can try running spack -k, "
"which will not check SSL certificates."
"Use this at your own risk.")
else:
# This is some other curl error. Curl will print the
# error, but print a spack message too
raise FailedDownloadError(
self.url, "Curl failed with error %d" % spack.curl.returncode)
self.url,
"Curl failed with error %d" % spack.curl.returncode)
# Check if we somehow got an HTML file rather than the archive we
# asked for. We only look at the last content type, to handle
# redirects properly.
content_types = re.findall(r'Content-Type:[^\r\n]+', headers)
if content_types and 'text/html' in content_types[-1]:
tty.warn("The contents of " + self.archive_file + " look like HTML.",
"The checksum will likely be bad. If it is, you can use",
"'spack clean <package>' to remove the bad archive, then fix",
"your internet gateway issue and install again.")
tty.warn(
"The contents of " + self.archive_file + " look like HTML.",
"The checksum will likely be bad. If it is, you can use",
"'spack clean <package>' to remove the bad archive, then fix",
"your internet gateway issue and install again.")
if save_file:
os.rename(partial_file, save_file)
if not self.archive_file:
raise FailedDownloadError(self.url)
@ -227,14 +262,16 @@ def expand(self):
self.stage.chdir()
if not self.archive_file:
raise NoArchiveFileError("URLFetchStrategy couldn't find archive file",
"Failed on expand() for URL %s" % self.url)
raise NoArchiveFileError(
"URLFetchStrategy couldn't find archive file",
"Failed on expand() for URL %s" % self.url)
decompress = decompressor_for(self.archive_file)
# Expand all tarballs in their own directory to contain
# exploding tarballs.
tarball_container = os.path.join(self.stage.path, "spack-expanded-archive")
tarball_container = os.path.join(self.stage.path,
"spack-expanded-archive")
mkdirp(tarball_container)
os.chdir(tarball_container)
decompress(self.archive_file)
@ -275,22 +312,33 @@ def check(self):
"""Check the downloaded archive against a checksum digest.
No-op if this stage checks code out of a repository."""
if not self.digest:
raise NoDigestError("Attempt to check URLFetchStrategy with no digest.")
raise NoDigestError(
"Attempt to check URLFetchStrategy with no digest.")
checker = crypto.Checker(self.digest)
if not checker.check(self.archive_file):
raise ChecksumError(
"%s checksum failed for %s" % (checker.hash_name, self.archive_file),
"Expected %s but got %s" % (self.digest, checker.sum))
"%s checksum failed for %s" %
(checker.hash_name, self.archive_file),
"Expected %s but got %s" % (self.digest, checker.sum))
@_needs_stage
def reset(self):
"""Removes the source path if it exists, then re-expands the archive."""
"""
Removes the source path if it exists, then re-expands the archive.
"""
if not self.archive_file:
raise NoArchiveFileError("Tried to reset URLFetchStrategy before fetching",
"Failed on reset() for URL %s" % self.url)
if self.stage.source_path:
shutil.rmtree(self.stage.source_path, ignore_errors=True)
raise NoArchiveFileError(
"Tried to reset URLFetchStrategy before fetching",
"Failed on reset() for URL %s" % self.url)
# Remove everythigng but the archive from the stage
for filename in os.listdir(self.stage.path):
abspath = os.path.join(self.stage.path, filename)
if abspath != self.archive_file:
shutil.rmtree(abspath, ignore_errors=True)
# Expand the archive again
self.expand()
def __repr__(self):
@ -311,14 +359,16 @@ def __init__(self, name, *rev_types, **kwargs):
# Set a URL based on the type of fetch strategy.
self.url = kwargs.get(name, None)
if not self.url: raise ValueError(
if not self.url:
raise ValueError(
"%s requires %s argument." % (self.__class__, name))
# Ensure that there's only one of the rev_types
if sum(k in kwargs for k in rev_types) > 1:
raise FetchStrategyError(
"Supply only one of %s to fetch with %s" % (
comma_or(rev_types), name))
"Supply only one of %s to fetch with %s" % (
comma_or(rev_types), name
))
# Set attributes for each rev type.
for rt in rev_types:
@ -356,32 +406,93 @@ def __repr__(self):
return "%s<%s>" % (self.__class__, self.url)
class GitFetchStrategy(VCSFetchStrategy):
"""Fetch strategy that gets source code from a git repository.
Use like this in a package:
class GoFetchStrategy(VCSFetchStrategy):
"""
Fetch strategy that employs the `go get` infrastructure
Use like this in a package:
version('name', git='https://github.com/project/repo.git')
version('name',
go='github.com/monochromegane/the_platinum_searcher/...')
Optionally, you can provide a branch, or commit to check out, e.g.:
version('1.1', git='https://github.com/project/repo.git', tag='v1.1')
You can use these three optional attributes in addition to ``git``:
* ``branch``: Particular branch to build from (default is master)
* ``tag``: Particular tag to check out
* ``commit``: Particular commit hash in the repo
Go get does not natively support versions, they can be faked with git
"""
enabled = True
required_attributes = ('git',)
required_attributes = ('go', )
def __init__(self, **kwargs):
# Discards the keywords in kwargs that may conflict with the next call to __init__
# Discards the keywords in kwargs that may conflict with the next
# call to __init__
forwarded_args = copy.copy(kwargs)
forwarded_args.pop('name', None)
super(GoFetchStrategy, self).__init__('go', **forwarded_args)
self._go = None
@property
def go_version(self):
vstring = self.go('version', output=str).split(' ')[2]
return Version(vstring)
@property
def go(self):
if not self._go:
self._go = which('go', required=True)
return self._go
@_needs_stage
def fetch(self):
self.stage.chdir()
tty.msg("Trying to get go resource:", self.url)
try:
os.mkdir('go')
except OSError:
pass
env = dict(os.environ)
env['GOPATH'] = os.path.join(os.getcwd(), 'go')
self.go('get', '-v', '-d', self.url, env=env)
def archive(self, destination):
super(GoFetchStrategy, self).archive(destination, exclude='.git')
@_needs_stage
def reset(self):
self.stage.chdir_to_source()
self.go('clean')
def __str__(self):
return "[go] %s" % self.url
class GitFetchStrategy(VCSFetchStrategy):
"""
Fetch strategy that gets source code from a git repository.
Use like this in a package:
version('name', git='https://github.com/project/repo.git')
Optionally, you can provide a branch, or commit to check out, e.g.:
version('1.1', git='https://github.com/project/repo.git', tag='v1.1')
You can use these three optional attributes in addition to ``git``:
* ``branch``: Particular branch to build from (default is master)
* ``tag``: Particular tag to check out
* ``commit``: Particular commit hash in the repo
"""
enabled = True
required_attributes = ('git', )
def __init__(self, **kwargs):
# Discards the keywords in kwargs that may conflict with the next call
# to __init__
forwarded_args = copy.copy(kwargs)
forwarded_args.pop('name', None)
super(GitFetchStrategy, self).__init__(
'git', 'tag', 'branch', 'commit', **forwarded_args)
'git', 'tag', 'branch', 'commit', **forwarded_args)
self._git = None
@property
@ -489,12 +600,13 @@ class SvnFetchStrategy(VCSFetchStrategy):
required_attributes = ['svn']
def __init__(self, **kwargs):
# Discards the keywords in kwargs that may conflict with the next call to __init__
# Discards the keywords in kwargs that may conflict with the next call
# to __init__
forwarded_args = copy.copy(kwargs)
forwarded_args.pop('name', None)
super(SvnFetchStrategy, self).__init__(
'svn', 'revision', **forwarded_args)
'svn', 'revision', **forwarded_args)
self._svn = None
if self.revision is not None:
self.revision = str(self.revision)
@ -550,32 +662,35 @@ def __str__(self):
class HgFetchStrategy(VCSFetchStrategy):
"""Fetch strategy that gets source code from a Mercurial repository.
Use like this in a package:
"""
Fetch strategy that gets source code from a Mercurial repository.
Use like this in a package:
version('name', hg='https://jay.grs.rwth-aachen.de/hg/lwm2')
version('name', hg='https://jay.grs.rwth-aachen.de/hg/lwm2')
Optionally, you can provide a branch, or revision to check out, e.g.:
Optionally, you can provide a branch, or revision to check out, e.g.:
version('torus', hg='https://jay.grs.rwth-aachen.de/hg/lwm2', branch='torus')
version('torus',
hg='https://jay.grs.rwth-aachen.de/hg/lwm2', branch='torus')
You can use the optional 'revision' attribute to check out a
branch, tag, or particular revision in hg. To prevent
non-reproducible builds, using a moving target like a branch is
discouraged.
You can use the optional 'revision' attribute to check out a
branch, tag, or particular revision in hg. To prevent
non-reproducible builds, using a moving target like a branch is
discouraged.
* ``revision``: Particular revision, branch, or tag.
* ``revision``: Particular revision, branch, or tag.
"""
enabled = True
required_attributes = ['hg']
def __init__(self, **kwargs):
# Discards the keywords in kwargs that may conflict with the next call to __init__
# Discards the keywords in kwargs that may conflict with the next call
# to __init__
forwarded_args = copy.copy(kwargs)
forwarded_args.pop('name', None)
super(HgFetchStrategy, self).__init__(
'hg', 'revision', **forwarded_args)
'hg', 'revision', **forwarded_args)
self._hg = None
@property
@ -649,7 +764,8 @@ def from_kwargs(**kwargs):
return fetcher(**kwargs)
# Raise an error in case we can't instantiate any known strategy
message = "Cannot instantiate any FetchStrategy"
long_message = message + " from the given arguments : {arguments}".format(srguments=kwargs)
long_message = message + " from the given arguments : {arguments}".format(
srguments=kwargs)
raise FetchError(message, long_message)
@ -661,7 +777,7 @@ def for_package_version(pkg, version):
"""Determine a fetch strategy based on the arguments supplied to
version() in the package description."""
# If it's not a known version, extrapolate one.
if not version in pkg.versions:
if version not in pkg.versions:
url = pkg.url_for_version(version)
if not url:
raise InvalidArgsError(pkg, version)
@ -699,7 +815,7 @@ class FailedDownloadError(FetchError):
def __init__(self, url, msg=""):
super(FailedDownloadError, self).__init__(
"Failed to fetch file from URL: %s" % url, msg)
"Failed to fetch file from URL: %s" % url, msg)
self.url = url
@ -715,7 +831,8 @@ def __init__(self, msg, long_msg=None):
class InvalidArgsError(FetchError):
def __init__(self, pkg, version):
msg = "Could not construct a fetch strategy for package %s at version %s"
msg = ("Could not construct a fetch strategy for package %s at "
"version %s")
msg %= (pkg.name, version)
super(InvalidArgsError, self).__init__(msg)
@ -732,4 +849,5 @@ class NoStageError(FetchError):
def __init__(self, method):
super(NoStageError, self).__init__(
"Must call FetchStrategy.set_stage() before calling %s" % method.__name__)
"Must call FetchStrategy.set_stage() before calling %s" %
method.__name__)

16
lib/spack/spack/graph.py
View File

@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""Functions for graphing DAGs of dependencies.

16
lib/spack/spack/hooks/__init__.py
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@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
"""This package contains modules with hooks for various stages in the
Spack install process. You can add modules here and they'll be

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lib/spack/spack/hooks/dotkit.py
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@ -1,26 +1,26 @@
##############################################################################
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License (as published by
# the Free Software Foundation) version 2.1 dated February 1999.
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU General Public License for more details.
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
import spack.modules

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