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py-abcpy: new package (#25713)

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Harmen Stoppels 2021-09-21 13:10:16 +02:00 committed by GitHub
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# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class PyAbcpy(PythonPackage):
"""
ABCpy is a highly modular, scientific library for approximate Bayesian
computation (ABC) written in Python. It is designed to run all included ABC
algorithms in parallel, either using multiple cores of a single computer or
using an Apache Spark or MPI enabled cluster.
"""
homepage = "https://github.com/eth-cscs/abcpy"
pypi = "abcpy/abcpy-0.6.3.tar.gz"
version('0.6.3', sha256='14cd959f3ccff8f5fd1d16239b8706cc8d1c1e2fe25d72855f500f005de41245')
depends_on('python@3.6:', type=('build', 'run'))
depends_on('py-setuptools', type='build')
depends_on('py-numpy', type=('build', 'run'))
depends_on('py-scipy', type=('build', 'run'))
depends_on('py-scikit-learn@0.23.1:', type=('build', 'run'))
depends_on('py-glmnet@2.2.1:', type=('build', 'run'))
depends_on('py-mpi4py', type=('build', 'run'))
depends_on('py-cloudpickle', type=('build', 'run'))
depends_on('py-matplotlib', type=('build', 'run'))
depends_on('py-tqdm', type=('build', 'run'))
depends_on('py-pot', type=('build', 'run'))
# Development dependencies are required in setup.py :(
depends_on('py-sphinx', type='build')
depends_on('py-sphinx-rtd-theme', type='build')
depends_on('py-coverage', type='build')