From a5f8cfd3f33714face7c6f4e3cf4e587192f8e66 Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Tue, 20 Aug 2024 13:27:57 -0500 Subject: [PATCH] RPackages with custom url: url -> urls=[url] --- .../repos/builtin/packages/phantompeakqualtools/package.py | 2 +- var/spack/repos/builtin/packages/qorts/package.py | 2 +- var/spack/repos/builtin/packages/r-bfastspatial/package.py | 2 +- var/spack/repos/builtin/packages/r-cmdstanr/package.py | 2 +- var/spack/repos/builtin/packages/r-dada2/package.py | 2 +- var/spack/repos/builtin/packages/r-ieugwasr/package.py | 2 +- var/spack/repos/builtin/packages/r-libpressio/package.py | 2 +- var/spack/repos/builtin/packages/r-mrinstruments/package.py | 2 +- .../repos/builtin/packages/r-phantompeakqualtools/package.py | 2 +- var/spack/repos/builtin/packages/r-twosamplemr/package.py | 2 +- 10 files changed, 10 insertions(+), 10 deletions(-) diff --git a/var/spack/repos/builtin/packages/phantompeakqualtools/package.py b/var/spack/repos/builtin/packages/phantompeakqualtools/package.py index 8cf6e02ed85..f97e5e325d1 100644 --- a/var/spack/repos/builtin/packages/phantompeakqualtools/package.py +++ b/var/spack/repos/builtin/packages/phantompeakqualtools/package.py @@ -11,7 +11,7 @@ class Phantompeakqualtools(RPackage): ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data.""" homepage = "https://github.com/kundajelab/phantompeakqualtools" - url = "https://github.com/kundajelab/phantompeakqualtools/archive/1.2.tar.gz" + urls = ["https://github.com/kundajelab/phantompeakqualtools/archive/1.2.tar.gz"] version("1.2", sha256="86cbcca80b65f150b1cdbea673d8a47caba88c2db6b3b567a80f2c797c9a1668") diff --git a/var/spack/repos/builtin/packages/qorts/package.py b/var/spack/repos/builtin/packages/qorts/package.py index 075010decae..cbe3eb5c388 100644 --- a/var/spack/repos/builtin/packages/qorts/package.py +++ b/var/spack/repos/builtin/packages/qorts/package.py @@ -17,7 +17,7 @@ class Qorts(RPackage): technology.""" homepage = "https://github.com/hartleys/QoRTs" - url = "https://github.com/hartleys/QoRTs/releases/download/v1.2.42/QoRTs_1.2.42.tar.gz" + urls = ["https://github.com/hartleys/QoRTs/releases/download/v1.2.42/QoRTs_1.2.42.tar.gz"] version("1.2.42", sha256="c9f73ce8d5aac1036d13c50475458a61a24cbe5c0baf7ac65b87a7118c51ec08") diff --git a/var/spack/repos/builtin/packages/r-bfastspatial/package.py b/var/spack/repos/builtin/packages/r-bfastspatial/package.py index e1ac087371c..4e5764f2d94 100644 --- a/var/spack/repos/builtin/packages/r-bfastspatial/package.py +++ b/var/spack/repos/builtin/packages/r-bfastspatial/package.py @@ -13,7 +13,7 @@ class RBfastspatial(RPackage): post-process the results.""" homepage = "https://github.com/loicdtx/bfastSpatial" - url = "https://github.com/loicdtx/bfastSpatial/archive/0.6.2.tar.gz" + urls = ["https://github.com/loicdtx/bfastSpatial/archive/0.6.2.tar.gz"] version("0.6.2", sha256="2c6220a5d04d6e4531b0b022a015651e630433f8d6864fa8b820aed5af5c1897") diff --git a/var/spack/repos/builtin/packages/r-cmdstanr/package.py b/var/spack/repos/builtin/packages/r-cmdstanr/package.py index b5cb716ba3d..42500efe28c 100644 --- a/var/spack/repos/builtin/packages/r-cmdstanr/package.py +++ b/var/spack/repos/builtin/packages/r-cmdstanr/package.py @@ -17,7 +17,7 @@ class RCmdstanr(RPackage): fewer unexpected crashes in RStudio, and a more permissive license.""" homepage = "https://mc-stan.org/cmdstanr/" - url = "https://github.com/stan-dev/cmdstanr/archive/refs/tags/v0.5.3.tar.gz" + urls = ["https://github.com/stan-dev/cmdstanr/archive/refs/tags/v0.5.3.tar.gz"] license("BSD-3-Clause") diff --git a/var/spack/repos/builtin/packages/r-dada2/package.py b/var/spack/repos/builtin/packages/r-dada2/package.py index 8f6be657091..2b109066b94 100644 --- a/var/spack/repos/builtin/packages/r-dada2/package.py +++ b/var/spack/repos/builtin/packages/r-dada2/package.py @@ -11,7 +11,7 @@ class RDada2(RPackage): resolution""" homepage = "https://benjjneb.github.io/dada2/" - url = "https://github.com/benjjneb/dada2/archive/v1.14.tar.gz" + urls = ["https://github.com/benjjneb/dada2/archive/v1.14.tar.gz"] license("LGPL-3.0-only") diff --git a/var/spack/repos/builtin/packages/r-ieugwasr/package.py b/var/spack/repos/builtin/packages/r-ieugwasr/package.py index 1825d39a8da..0cc69a1647a 100644 --- a/var/spack/repos/builtin/packages/r-ieugwasr/package.py +++ b/var/spack/repos/builtin/packages/r-ieugwasr/package.py @@ -14,7 +14,7 @@ class RIeugwasr(RPackage): specific queries.""" homepage = "https://github.com/MRCIEU/ieugwasr" - url = "https://github.com/MRCIEU/ieugwasr/archive/refs/tags/0.1.5.tar.gz" + urls = ["https://github.com/MRCIEU/ieugwasr/archive/refs/tags/0.1.5.tar.gz"] license("MIT") diff --git a/var/spack/repos/builtin/packages/r-libpressio/package.py b/var/spack/repos/builtin/packages/r-libpressio/package.py index 7e020397820..ac0bf50a39a 100644 --- a/var/spack/repos/builtin/packages/r-libpressio/package.py +++ b/var/spack/repos/builtin/packages/r-libpressio/package.py @@ -10,7 +10,7 @@ class RLibpressio(RPackage): """R package for libpressio""" homepage = "https://github.com/robertu94/libpressio-r" - url = "https://github.com/robertu94/libpressio-r/archive/0.0.1.tar.gz" + urls = ["https://github.com/robertu94/libpressio-r/archive/0.0.1.tar.gz"] maintainers("robertu94") diff --git a/var/spack/repos/builtin/packages/r-mrinstruments/package.py b/var/spack/repos/builtin/packages/r-mrinstruments/package.py index 736577c9af5..580745626df 100644 --- a/var/spack/repos/builtin/packages/r-mrinstruments/package.py +++ b/var/spack/repos/builtin/packages/r-mrinstruments/package.py @@ -12,7 +12,7 @@ class RMrinstruments(RPackage): Datasets of eQTLs, GWAS catalogs, etc.""" homepage = "https://github.com/MRCIEU/MRInstruments" - url = "https://github.com/MRCIEU/MRInstruments/archive/refs/tags/0.3.3.tar.gz" + urls = ["https://github.com/MRCIEU/MRInstruments/archive/refs/tags/0.3.3.tar.gz"] version("0.3.3", sha256="4ddbaf6335133e8f7baef469d6bc1f89212462b9f4062c9e4ddda37b12eb3486") diff --git a/var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py b/var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py index ff1d6269cef..f54174aa0b3 100644 --- a/var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py +++ b/var/spack/repos/builtin/packages/r-phantompeakqualtools/package.py @@ -14,7 +14,7 @@ class RPhantompeakqualtools(RPackage): package.""" homepage = "https://github.com/kundajelab/phantompeakqualtools" - url = "https://github.com/kundajelab/phantompeakqualtools/raw/master/spp_1.14.tar.gz" + urls = ["https://github.com/kundajelab/phantompeakqualtools/raw/master/spp_1.14.tar.gz"] version("1.14", sha256="d03be6163e82aed72298e54a92c181570f9975a395f57a69b21ac02b1001520b") diff --git a/var/spack/repos/builtin/packages/r-twosamplemr/package.py b/var/spack/repos/builtin/packages/r-twosamplemr/package.py index d83554678f3..ae089392879 100644 --- a/var/spack/repos/builtin/packages/r-twosamplemr/package.py +++ b/var/spack/repos/builtin/packages/r-twosamplemr/package.py @@ -16,7 +16,7 @@ class RTwosamplemr(RPackage): serious work we strongly recommend using this R package.""" homepage = "https://mrcieu.github.io/TwoSampleMR/" - url = "https://github.com/MRCIEU/TwoSampleMR/archive/refs/tags/v0.5.6.tar.gz" + urls = ["https://github.com/MRCIEU/TwoSampleMR/archive/refs/tags/v0.5.6.tar.gz"] license("MIT")