environment modules : added function to construct them from source files
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bc038eb7c3
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@ -26,7 +26,9 @@
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import inspect
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import os
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import os.path
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import subprocess
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import shlex
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import json
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class NameModifier(object):
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def __init__(self, name, **kwargs):
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@ -240,6 +242,78 @@ def apply_modifications(self):
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for x in actions:
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x.execute()
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@staticmethod
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def from_sourcing_files(*args, **kwargs):
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"""
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Creates an instance of EnvironmentModifications that, if executed,
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has the same effect on the environment as sourcing the files passed as
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parameters
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Args:
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*args: list of files to be sourced
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Returns:
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instance of EnvironmentModifications
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"""
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env = EnvironmentModifications()
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# Check if the files are actually there
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if not all(os.path.isfile(file) for file in args):
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raise RuntimeError('trying to source non-existing files')
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# Relevant kwd parameters and formats
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info = dict(kwargs)
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info.setdefault('shell', '/bin/bash')
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info.setdefault('shell_options', '-c')
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info.setdefault('source_command', 'source')
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info.setdefault('suppress_output', '&> /dev/null')
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info.setdefault('concatenate_on_success', '&&')
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shell = '{shell}'.format(**info)
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shell_options = '{shell_options}'.format(**info)
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source_file = '{source_command} {file} {concatenate_on_success}'
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dump_environment = 'python -c "import os, json; print json.dumps(dict(os.environ))"'
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# Construct the command that will be executed
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command = [source_file.format(file=file, **info) for file in args]
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command.append(dump_environment)
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command = ' '.join(command)
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command = [
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shell,
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shell_options,
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command
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]
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# Try to source all the files,
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proc = subprocess.Popen(command, stdout=subprocess.PIPE, env=os.environ)
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proc.wait()
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if proc.returncode != 0:
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raise RuntimeError('sourcing files returned a non-zero exit code')
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output = ''.join([line for line in proc.stdout])
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# Construct a dictionary with all the variables in the environment
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after_source_env = dict(json.loads(output))
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# Filter variables that are due to how we source
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after_source_env.pop('SHLVL')
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after_source_env.pop('_')
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after_source_env.pop('PWD')
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# Fill the EnvironmentModifications instance
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this_environment = dict(os.environ)
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# New variables
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new_variables = set(after_source_env) - set(this_environment)
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for x in new_variables:
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env.set(x, after_source_env[x])
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# Variables that have been unset
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unset_variables = set(this_environment) - set(after_source_env)
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for x in unset_variables:
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env.unset(x)
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# Variables that have been modified
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common_variables = set(this_environment).intersection(set(after_source_env))
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modified_variables = [x for x in common_variables if this_environment[x] != after_source_env[x]]
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for x in modified_variables:
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# TODO : we may be smarter here, and try to parse if we could compose append_path
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# TODO : and prepend_path to modify the value
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env.set(x, after_source_env[x])
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return env
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def concatenate_paths(paths, separator=':'):
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"""
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3
lib/spack/spack/test/data/sourceme_first.sh
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3
lib/spack/spack/test/data/sourceme_first.sh
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@ -0,0 +1,3 @@
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#!/usr/bin/env bash
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export NEW_VAR='new'
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export UNSET_ME='overridden'
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3
lib/spack/spack/test/data/sourceme_second.sh
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3
lib/spack/spack/test/data/sourceme_second.sh
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@ -0,0 +1,3 @@
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#!/usr/bin/env bash
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export PATH_LIST='/path/first:/path/second:/path/third:/path/fourth'
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unset EMPTY_PATH_LIST
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@ -24,7 +24,10 @@
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##############################################################################
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import unittest
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import os
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from spack.environment import EnvironmentModifications
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from spack import spack_root
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from llnl.util.filesystem import join_path
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from spack.environment import EnvironmentModifications, SetEnv, UnsetEnv
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class EnvironmentTest(unittest.TestCase):
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@ -95,3 +98,37 @@ def test_extend(self):
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self.assertEqual(len(copy_construct), 2)
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for x, y in zip(env, copy_construct):
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assert x is y
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def test_source_files(self):
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datadir = join_path(spack_root, 'lib', 'spack', 'spack', 'test', 'data')
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files = [
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join_path(datadir, 'sourceme_first.sh'),
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join_path(datadir, 'sourceme_second.sh')
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]
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env = EnvironmentModifications.from_sourcing_files(*files)
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modifications = env.group_by_name()
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self.assertEqual(len(modifications), 4)
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# Set new variables
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self.assertEqual(len(modifications['NEW_VAR']), 1)
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self.assertTrue(isinstance(modifications['NEW_VAR'][0], SetEnv))
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self.assertEqual(modifications['NEW_VAR'][0].value, 'new')
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# Unset variables
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self.assertEqual(len(modifications['EMPTY_PATH_LIST']), 1)
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self.assertTrue(isinstance(modifications['EMPTY_PATH_LIST'][0], UnsetEnv))
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# Modified variables
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self.assertEqual(len(modifications['UNSET_ME']), 1)
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self.assertTrue(isinstance(modifications['UNSET_ME'][0], SetEnv))
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self.assertEqual(modifications['UNSET_ME'][0].value, 'overridden')
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self.assertEqual(len(modifications['PATH_LIST']), 1)
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self.assertTrue(isinstance(modifications['PATH_LIST'][0], SetEnv))
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self.assertEqual(modifications['PATH_LIST'][0].value, '/path/first:/path/second:/path/third:/path/fourth')
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# TODO : with reference to the TODO in spack/environment.py
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# TODO : remove the above and insert
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# self.assertEqual(len(modifications['PATH_LIST']), 2)
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# self.assertTrue(isinstance(modifications['PATH_LIST'][0], PrependPath))
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# self.assertEqual(modifications['PATH_LIST'][0].value, '/path/first')
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# self.assertTrue(isinstance(modifications['PATH_LIST'][1], AppendPath))
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# self.assertEqual(modifications['PATH_LIST'][1].value, '/path/fourth')
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