Merge branch 'eschnett/sympol' of git://github.com/eschnett/spack into eschnett-eschnett/sympol
This commit is contained in:
commit
a7e568b1d1
62
var/spack/repos/builtin/packages/bliss/Makefile.spack.patch
Normal file
62
var/spack/repos/builtin/packages/bliss/Makefile.spack.patch
Normal file
@ -0,0 +1,62 @@
|
||||
--- old/Makefile.spack
|
||||
+++ new/Makefile.spack
|
||||
@@ -0,0 +1,59 @@
|
||||
+# Set PREFIX to the install location for both building and installing
|
||||
+# Set GMP_PREFIX to the location where GMP is installed
|
||||
+
|
||||
+SRCS = \
|
||||
+ bliss_C.cc \
|
||||
+ defs.cc \
|
||||
+ graph.cc \
|
||||
+ heap.cc \
|
||||
+ orbit.cc \
|
||||
+ partition.cc \
|
||||
+ timer.cc \
|
||||
+ uintseqhash.cc \
|
||||
+ utils.cc
|
||||
+
|
||||
+all: libbliss.la bliss libbliss_gmp.la bliss_gmp
|
||||
+
|
||||
+libbliss.la: $(SRCS:%.cc=%.lo)
|
||||
+ libtool --mode=link --tag=CXX c++ -g -O3 \
|
||||
+ -rpath $(PREFIX)/lib -o $@ $^
|
||||
+libbliss_gmp.la: $(SRCS:%.cc=%.gmp.lo)
|
||||
+ libtool --mode=link --tag=CXX c++ -g -O3 \
|
||||
+ -rpath $(PREFIX)/lib -o $@ $^ -L$(GMP_PREFIX)/lib -lgmp
|
||||
+
|
||||
+bliss: bliss.lo libbliss.la
|
||||
+ libtool --mode=link --tag=CXX c++ -g -O3 -o $@ $^
|
||||
+
|
||||
+bliss_gmp: bliss.gmp.lo libbliss_gmp.la
|
||||
+ libtool --mode=link --tag=CXX c++ -g -O3 -o $@ $^
|
||||
+
|
||||
+%.lo: %.cc
|
||||
+ libtool --mode=compile --tag=CXX c++ -g -O3 -o $@ -c $*.cc
|
||||
+%.gmp.lo: %.cc
|
||||
+ libtool --mode=compile --tag=CXX c++ -g -O3 -o $@ \
|
||||
+ -c -DBLISS_USE_GMP $*.cc
|
||||
+
|
||||
+install:
|
||||
+ mkdir -p $(PREFIX)/bin
|
||||
+ mkdir -p $(PREFIX)/include/bliss
|
||||
+ mkdir -p $(PREFIX)/lib
|
||||
+ libtool --mode=install cp bliss $(PREFIX)/bin/bliss
|
||||
+ libtool --mode=install cp bliss_gmp $(PREFIX)/bin/bliss_gmp
|
||||
+ libtool --mode=install cp bignum.hh $(PREFIX)/include/bliss/bignum.hh
|
||||
+ libtool --mode=install cp bliss_C.h $(PREFIX)/include/bliss/bliss_C.h
|
||||
+ libtool --mode=install cp defs.hh $(PREFIX)/include/bliss/defs.hh
|
||||
+ libtool --mode=install cp graph.hh $(PREFIX)/include/bliss/graph.hh
|
||||
+ libtool --mode=install cp heap.hh $(PREFIX)/include/bliss/heap.hh
|
||||
+ libtool --mode=install cp kqueue.hh $(PREFIX)/include/bliss/kqueue.hh
|
||||
+ libtool --mode=install cp kstack.hh $(PREFIX)/include/bliss/kstack.hh
|
||||
+ libtool --mode=install cp orbit.hh $(PREFIX)/include/bliss/orbit.hh
|
||||
+ libtool --mode=install cp partition.hh \
|
||||
+ $(PREFIX)/include/bliss/partition.hh
|
||||
+ libtool --mode=install cp timer.hh $(PREFIX)/include/bliss/timer.hh
|
||||
+ libtool --mode=install cp uintseqhash.hh \
|
||||
+ $(PREFIX)/include/bliss/uintseqhash.hh
|
||||
+ libtool --mode=install cp utils.hh $(PREFIX)/include/bliss/utils.hh
|
||||
+ libtool --mode=install cp libbliss.la $(PREFIX)/lib/libbliss.la
|
||||
+ libtool --mode=install cp libbliss_gmp.la $(PREFIX)/lib/libbliss_gmp.la
|
||||
+
|
||||
+.PHONY: all install
|
50
var/spack/repos/builtin/packages/bliss/package.py
Normal file
50
var/spack/repos/builtin/packages/bliss/package.py
Normal file
@ -0,0 +1,50 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Bliss(Package):
|
||||
"""bliss: A Tool for Computing Automorphism Groups and Canonical
|
||||
Labelings of Graphs"""
|
||||
|
||||
homepage = "http://www.tcs.hut.fi/Software/bliss/"
|
||||
url = "http://www.tcs.hut.fi/Software/bliss/bliss-0.73.zip"
|
||||
|
||||
version('0.73', '72f2e310786923b5c398ba0fc40b42ce')
|
||||
|
||||
# Note: Bliss can also be built without gmp, but we don't support this yet
|
||||
|
||||
depends_on("gmp")
|
||||
depends_on("libtool", type='build')
|
||||
|
||||
patch("Makefile.spack.patch")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# The Makefile isn't portable; use our own instead
|
||||
makeargs = ["-f", "Makefile.spack",
|
||||
"PREFIX=%s" % prefix, "GMP_PREFIX=%s" % spec["gmp"].prefix]
|
||||
make(*makeargs)
|
||||
make("install", *makeargs)
|
22
var/spack/repos/builtin/packages/cdd/Makefile.spack.patch
Normal file
22
var/spack/repos/builtin/packages/cdd/Makefile.spack.patch
Normal file
@ -0,0 +1,22 @@
|
||||
--- old/Makefile.spack
|
||||
+++ new/Makefile.spack
|
||||
@@ -0,0 +1,19 @@
|
||||
+# Set PREFIX to the install location for both building and installing
|
||||
+
|
||||
+all: cdd dplex_test
|
||||
+
|
||||
+cdd: cdd.lo cddio.lo cddarith.lo dplex.lo setoper.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O2 -o $@ $^
|
||||
+
|
||||
+dplex_test: dplex.lo dplex_test.lo setoper.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O2 -o $@ $^
|
||||
+
|
||||
+%.lo: %.c
|
||||
+ libtool --mode=compile --tag=CC cc -g -O2 -c $*.c
|
||||
+
|
||||
+install:
|
||||
+ mkdir -p $(PREFIX)/bin
|
||||
+ libtool --mode=install cp cdd $(PREFIX)/bin/cdd
|
||||
+ libtool --mode=install cp dplex_test $(PREFIX)/bin/dplex_test
|
||||
+
|
||||
+.PHONY: all install
|
52
var/spack/repos/builtin/packages/cdd/package.py
Normal file
52
var/spack/repos/builtin/packages/cdd/package.py
Normal file
@ -0,0 +1,52 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Cdd(Package):
|
||||
"""The program cdd+ (cdd, respectively) is a C++ (ANSI C)
|
||||
implementation of the Double Description Method [MRTT53] for
|
||||
generating all vertices (i.e. extreme points) and extreme rays of
|
||||
a general convex polyhedron given by a system of linear
|
||||
inequalities"""
|
||||
homepage = "https://www.inf.ethz.ch/personal/fukudak/cdd_home/cdd.html"
|
||||
url = "ftp://ftp.ifor.math.ethz.ch/pub/fukuda/cdd/cdd-061a.tar.gz"
|
||||
|
||||
def url_for_version(self, version):
|
||||
return ("ftp://ftp.ifor.math.ethz.ch/pub/fukuda/cdd/cdd-%s.tar.gz" %
|
||||
str(version.dotted()).replace('.', ''))
|
||||
|
||||
version('0.61a', '22c24a7a9349dd7ec0e24531925a02d9')
|
||||
|
||||
depends_on("libtool", type="build")
|
||||
|
||||
patch("Makefile.spack.patch")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# The Makefile isn't portable; use our own instead
|
||||
makeargs = ["-f", "Makefile.spack", "PREFIX=%s" % prefix]
|
||||
make(*makeargs)
|
||||
make("install", *makeargs)
|
58
var/spack/repos/builtin/packages/cddlib/package.py
Normal file
58
var/spack/repos/builtin/packages/cddlib/package.py
Normal file
@ -0,0 +1,58 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Cddlib(Package):
|
||||
"""The C-library cddlib is a C implementation of the Double Description
|
||||
Method of Motzkin et al. for generating all vertices (i.e. extreme points)
|
||||
and extreme rays of a general convex polyhedron in R^d given by a system
|
||||
of linear inequalities"""
|
||||
homepage = "https://www.inf.ethz.ch/personal/fukudak/cdd_home/"
|
||||
# This is the original download url. It is currently down [2016-08-23],
|
||||
# but should be reinstated or updated once the issue is resolved.
|
||||
# url = "ftp://ftp.ifor.math.ethz.ch/pub/fukuda/cdd/cddlib-094h.tar.gz"
|
||||
url = "http://pkgs.fedoraproject.org/lookaside/pkgs/cddlib/cddlib-094h.tar.gz/1467d270860bbcb26d3ebae424690e7c/cddlib-094h.tar.gz"
|
||||
|
||||
def url_for_version(self, version):
|
||||
# Since the commit id is part of the version, we can't
|
||||
# auto-generate the string, and we need to explicitly list all
|
||||
# known versions here. Currently, there is only one version.
|
||||
if str(version) == '0.94h':
|
||||
return "http://pkgs.fedoraproject.org/lookaside/pkgs/cddlib/cddlib-094h.tar.gz/1467d270860bbcb26d3ebae424690e7c/cddlib-094h.tar.gz"
|
||||
raise InstallError("Unsupported version %s" % str(version))
|
||||
|
||||
version('0.94h', '1467d270860bbcb26d3ebae424690e7c')
|
||||
|
||||
# Note: It should be possible to build cddlib also without gmp
|
||||
|
||||
depends_on("gmp")
|
||||
depends_on("libtool", type="build")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
configure("--prefix=%s" % prefix)
|
||||
make()
|
||||
make("install")
|
60
var/spack/repos/builtin/packages/lrslib/Makefile.spack.patch
Normal file
60
var/spack/repos/builtin/packages/lrslib/Makefile.spack.patch
Normal file
@ -0,0 +1,60 @@
|
||||
--- old/Makefile.spack
|
||||
+++ new/Makefile.spack
|
||||
@@ -0,0 +1,57 @@
|
||||
+# Set PREFIX to the install location for both building and installing
|
||||
+# Set BOOST_PREFIX to the location where BOOST is installed
|
||||
+# Set GMP_PREFIX to the location where GMP is installed
|
||||
+
|
||||
+all: liblrsgmp.la \
|
||||
+ 2nash fourier lrs lrs1 lrsnash redund redund1 setnash setnash2
|
||||
+
|
||||
+liblrsgmp.la: lrslib-GMP.lo lrsgmp-GMP.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 \
|
||||
+ -rpath $(PREFIX)/lib -o $@ $^ \
|
||||
+ -L$(GMP_PREFIX)/lib -lgmp
|
||||
+
|
||||
+lrs1: lrs-LONG.lo lrslib-LONG.lo lrslong-LONG.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+redund1: redund-LONG.lo lrslib-LONG.lo lrslong-LONG.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+lrs: lrs-GMP.lo lrslib-GMP.lo lrsmp-GMP.lo liblrsgmp.la
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+redund: redund-GMP.lo lrslib-GMP.lo lrsmp-GMP.lo liblrsgmp.la
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+fourier: fourier-GMP.lo lrslib-GMP.lo lrsgmp-GMP.lo liblrsgmp.la
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+lrsnash: lrsnash-GMP.lo lrsnashlib-GMP.lo lrslib-GMP.lo lrsmp-GMP.lo \
|
||||
+ liblrsgmp.la
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+2nash: 2nash.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+setnash: setupnash.lo lrslib.lo lrsmp.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+setnash2: setupnash2.lo lrslib.lo lrsmp.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+
|
||||
+%.lo: %.c
|
||||
+ libtool --mode=compile --tag=CC cc -g -O3 -o $@ -c $*.c
|
||||
+%-GMP.lo: %.c
|
||||
+ libtool --mode=compile --tag=CC cc -g -O3 -o $@ -DGMP -c $*.c
|
||||
+%-LONG.lo: %.c
|
||||
+ libtool --mode=compile --tag=CC cc -g -O3 -o $@ -DLRSLONG -c $*.c
|
||||
+
|
||||
+install:
|
||||
+ mkdir -p $(PREFIX)/bin
|
||||
+ mkdir -p $(PREFIX)/include
|
||||
+ mkdir -p $(PREFIX)/lib
|
||||
+ libtool --mode=install cp 2nash $(PREFIX)/bin/2nash
|
||||
+ libtool --mode=install cp fourier $(PREFIX)/bin/fourier
|
||||
+ libtool --mode=install cp lrs $(PREFIX)/bin/lrs
|
||||
+ libtool --mode=install cp lrs1 $(PREFIX)/bin/lrs1
|
||||
+ libtool --mode=install cp lrsnash $(PREFIX)/bin/lrsnash
|
||||
+ libtool --mode=install cp redund $(PREFIX)/bin/redund
|
||||
+ libtool --mode=install cp redund1 $(PREFIX)/bin/redund1
|
||||
+ libtool --mode=install cp setnash $(PREFIX)/bin/setnash
|
||||
+ libtool --mode=install cp setnash2 $(PREFIX)/bin/setnash2
|
||||
+ libtool --mode=install cp lrsgmp.h $(PREFIX)/include/lrsgmp.h
|
||||
+ libtool --mode=install cp lrslib.h $(PREFIX)/include/lrslib.h
|
||||
+ libtool --mode=install cp liblrsgmp.la $(PREFIX)/lib/liblrsgmp.la
|
||||
+
|
||||
+.PHONY: all install
|
61
var/spack/repos/builtin/packages/lrslib/package.py
Normal file
61
var/spack/repos/builtin/packages/lrslib/package.py
Normal file
@ -0,0 +1,61 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Lrslib(Package):
|
||||
"""lrslib Ver 6.2 is a self-contained ANSI C implementation of the
|
||||
reverse search algorithm for vertex enumeration/convex hull
|
||||
problems and comes with a choice of three arithmetic packages"""
|
||||
homepage = "http://cgm.cs.mcgill.ca/~avis/C/lrs.html"
|
||||
url = "http://cgm.cs.mcgill.ca/~avis/C/lrslib/archive/lrslib-062.tar.gz"
|
||||
|
||||
def url_for_version(self, version):
|
||||
return ("http://cgm.cs.mcgill.ca/~avis/C/lrslib/archive/lrslib-%s.tar.gz" %
|
||||
('0' + str(version).replace('.', '')))
|
||||
|
||||
version('6.2', 'be5da7b3b90cc2be628dcade90c5d1b9')
|
||||
version('6.1', '0b3687c8693cd7d1f234a3f65e147551')
|
||||
version('6.0', 'd600a2e62969ad03f7ab2f85f1b3709c')
|
||||
version('5.1', 'cca323eee8bf76f598a13d7bf67cc13d')
|
||||
version('4.3', '86dd9a45d20a3a0069f77e61be5b46ad')
|
||||
|
||||
# Note: lrslib can also be built with Boost, and probably without gmp
|
||||
|
||||
# depends_on("boost")
|
||||
depends_on("gmp")
|
||||
depends_on("libtool", type="build")
|
||||
|
||||
patch("Makefile.spack.patch")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# The Makefile isn't portable; use our own instead
|
||||
makeargs = ["-f", "Makefile.spack",
|
||||
"PREFIX=%s" % prefix,
|
||||
# "BOOST_PREFIX=%s" % spec["boost"].prefix,
|
||||
"GMP_PREFIX=%s" % spec["gmp"].prefix]
|
||||
make(*makeargs)
|
||||
make("install", *makeargs)
|
89
var/spack/repos/builtin/packages/nauty/package.py
Normal file
89
var/spack/repos/builtin/packages/nauty/package.py
Normal file
@ -0,0 +1,89 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
import shutil
|
||||
from spack import *
|
||||
|
||||
|
||||
class Nauty(Package):
|
||||
"""nauty and Traces are programs for computing automorphism groups of
|
||||
graphsq and digraphs"""
|
||||
homepage = "http://pallini.di.uniroma1.it/index.html"
|
||||
url = "http://pallini.di.uniroma1.it/nauty26r7.tar.gz"
|
||||
|
||||
def url_for_version(self, version):
|
||||
return ("http://pallini.di.uniroma1.it/nauty%s.tar.gz" %
|
||||
str(version).replace('.', ''))
|
||||
|
||||
version('2.6r7', 'b2b18e03ea7698db3fbe06c5d76ad8fe')
|
||||
version('2.6r5', '91b03a7b069962e94fc9aac8831ce8d2')
|
||||
version('2.5r9', 'e8ecd08b0892a1fb13329c147f08de6d')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
configure('--prefix=%s' % prefix)
|
||||
make()
|
||||
|
||||
exes = [
|
||||
"NRswitchg",
|
||||
"addedgeg",
|
||||
"amtog",
|
||||
"biplabg",
|
||||
"catg",
|
||||
"complg",
|
||||
"converseg",
|
||||
"copyg",
|
||||
"countg",
|
||||
"cubhamg",
|
||||
"deledgeg",
|
||||
"delptg",
|
||||
"directg",
|
||||
"dreadnaut",
|
||||
"dretodot",
|
||||
"dretog",
|
||||
"genbg",
|
||||
"genbgL",
|
||||
"geng",
|
||||
"genquarticg",
|
||||
"genrang",
|
||||
"genspecialg",
|
||||
"gentourng",
|
||||
"gentreeg",
|
||||
"hamheuristic",
|
||||
"labelg",
|
||||
"linegraphg",
|
||||
"listg",
|
||||
"multig",
|
||||
"newedgeg",
|
||||
"pickg",
|
||||
"planarg",
|
||||
"ranlabg",
|
||||
"shortg",
|
||||
"subdivideg",
|
||||
"twohamg",
|
||||
"vcolg",
|
||||
"watercluster2"]
|
||||
mkdirp(prefix.bin)
|
||||
for exe in exes:
|
||||
shutil.copyfile(exe, join_path(prefix.bin, exe))
|
45
var/spack/repos/builtin/packages/panda/package.py
Normal file
45
var/spack/repos/builtin/packages/panda/package.py
Normal file
@ -0,0 +1,45 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Panda(Package):
|
||||
"""PANDA: Parallel AdjaceNcy Decomposition Algorithm"""
|
||||
homepage = "http://comopt.ifi.uni-heidelberg.de/software/PANDA/index.html"
|
||||
url = "http://comopt.ifi.uni-heidelberg.de/software/PANDA/downloads/current_panda.tar"
|
||||
|
||||
version('current', 'b06dc312ee56e13eefea9c915b70fcef')
|
||||
|
||||
# Note: Panda can also be built without MPI support
|
||||
|
||||
depends_on("cmake", type="build")
|
||||
depends_on("mpi")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
with working_dir('spack-build', create=True):
|
||||
cmake("..", *std_cmake_args)
|
||||
make()
|
||||
make("install")
|
57
var/spack/repos/builtin/packages/polymake/package.py
Normal file
57
var/spack/repos/builtin/packages/polymake/package.py
Normal file
@ -0,0 +1,57 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Polymake(Package):
|
||||
"""polymake is open source software for research in polyhedral geometry"""
|
||||
homepage = "https://polymake.org/doku.php"
|
||||
url = "https://polymake.org/lib/exe/fetch.php/download/polymake-3.0r1.tar.bz2"
|
||||
|
||||
version('3.0r2', '08584547589f052ea50e2148109202ab')
|
||||
version('3.0r1', '63ecbecf9697c6826724d8a041d2cac0')
|
||||
|
||||
# Note: Could also be built with nauty instead of bliss
|
||||
|
||||
depends_on("bliss")
|
||||
depends_on("boost")
|
||||
depends_on("cddlib")
|
||||
depends_on("gmp")
|
||||
depends_on("lrslib")
|
||||
depends_on("mpfr")
|
||||
depends_on("ppl")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
configure("--prefix=%s" % prefix,
|
||||
"--with-bliss=%s" % spec["bliss"].prefix,
|
||||
"--with-boost=%s" % spec["boost"].prefix,
|
||||
"--with-cdd=%s" % spec["cddlib"].prefix,
|
||||
"--with-gmp=%s" % spec["gmp"].prefix,
|
||||
"--with-lrs=%s" % spec["lrslib"].prefix,
|
||||
"--with-mpfr=%s" % spec["mpfr"].prefix,
|
||||
"--with-ppl=%s" % spec["ppl"].prefix)
|
||||
make()
|
||||
make("install")
|
23
var/spack/repos/builtin/packages/porta/Makefile.spack.patch
Normal file
23
var/spack/repos/builtin/packages/porta/Makefile.spack.patch
Normal file
@ -0,0 +1,23 @@
|
||||
--- old/src/Makefile.spack
|
||||
+++ new/src/Makefile.spack
|
||||
@@ -0,0 +1,20 @@
|
||||
+# Set PREFIX to the install location for both building and installing
|
||||
+
|
||||
+all: valid xporta
|
||||
+
|
||||
+valid: common.lo arith.lo inout.lo log.lo valid.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+
|
||||
+xporta: common.lo arith.lo inout.lo log.lo \
|
||||
+ porta.lo four_mot.lo portsort.lo largecalc.lo mp.lo
|
||||
+ libtool --mode=link --tag=CC cc -g -O3 -o $@ $^
|
||||
+
|
||||
+%.lo: %.c
|
||||
+ libtool --mode=compile --tag=CC cc -g -O3 -c $*.c
|
||||
+
|
||||
+install:
|
||||
+ mkdir -p $(PREFIX)/bin
|
||||
+ libtool --mode=install cp valid $(PREFIX)/bin/valid
|
||||
+ libtool --mode=install cp xporta $(PREFIX)/bin/xporta
|
||||
+
|
||||
+.PHONY: all install
|
44
var/spack/repos/builtin/packages/porta/package.py
Normal file
44
var/spack/repos/builtin/packages/porta/package.py
Normal file
@ -0,0 +1,44 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Porta(Package):
|
||||
"""PORTA is a collection of routines for analyzing polytopes and
|
||||
polyhedra"""
|
||||
homepage = "http://porta.zib.de"
|
||||
url = "http://porta.zib.de/porta-1.4.1.tgz"
|
||||
|
||||
version('1.4.1', '585179bf19d214ed364663a5d17bd5fc')
|
||||
|
||||
depends_on("libtool", type="build")
|
||||
|
||||
patch("Makefile.spack.patch")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
with working_dir("src"):
|
||||
make("-f", "Makefile.spack", "PREFIX=%s" % prefix)
|
||||
make("-f", "Makefile.spack", "PREFIX=%s" % prefix, "install")
|
10
var/spack/repos/builtin/packages/sympol/lrs_mp_close.patch
Normal file
10
var/spack/repos/builtin/packages/sympol/lrs_mp_close.patch
Normal file
@ -0,0 +1,10 @@
|
||||
--- old/sympol/raycomputationlrs.cpp
|
||||
+++ new/sympol/raycomputationlrs.cpp
|
||||
@@ -66,7 +66,6 @@
|
||||
return true;
|
||||
}
|
||||
|
||||
- lrs_mp_close();
|
||||
|
||||
if (RayComputationLRS::ms_fIn != NULL) {
|
||||
if (std::fclose(RayComputationLRS::ms_fIn)) {
|
47
var/spack/repos/builtin/packages/sympol/package.py
Normal file
47
var/spack/repos/builtin/packages/sympol/package.py
Normal file
@ -0,0 +1,47 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU Lesser General Public License (as
|
||||
# published by the Free Software Foundation) version 2.1, February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU Lesser General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public
|
||||
# License along with this program; if not, write to the Free Software
|
||||
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Sympol(Package):
|
||||
"""SymPol is a C++ tool to work with symmetric polyhedra"""
|
||||
homepage = "http://www.math.uni-rostock.de/~rehn/software/sympol.html"
|
||||
url = "http://www.math.uni-rostock.de/~rehn/software/sympol-0.1.8.tar.gz"
|
||||
|
||||
version('0.1.8', '7cba1997f8532c754cb7259bf70caacb')
|
||||
|
||||
depends_on("bliss")
|
||||
depends_on("boost")
|
||||
depends_on("cmake")
|
||||
depends_on("gmp")
|
||||
depends_on("lrslib")
|
||||
|
||||
patch("lrs_mp_close.patch")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
cmake(".", *std_cmake_args)
|
||||
make()
|
||||
make("install")
|
Loading…
Reference in New Issue
Block a user