New: py-ax-platform; Update: py-botorch, py-gpytorch, py-linear-operator, py-pyro-ppl, py-typeguard (#37143)

var/spack/repos/builtin/packages/py-ax-platform/package.py

@@ -0,0 +1,37 @@
+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class PyAxPlatform(PythonPackage):
+    """Adaptive experimentation is the machine-learning guided process of
+    iteratively exploring a (possibly infinite) parameter space in order to identify
+    optimal configurations in a resource-efficient manner. Ax currently supports
+    Bayesian optimization and bandit optimization as exploration strategies. Bayesian
+    optimization in Ax is powered by BoTorch, a modern library for Bayesian
+    optimization research built on PyTorch."""
+
+    homepage = "https://github.com/facebook/Ax"
+    pypi = "ax-platform/ax-platform-0.3.1.tar.gz"
+
+    maintainers("meyersbs")
+
+    version("0.3.1", sha256="0bad1d16155560fdd8644308d2771edf7fd977ad41fea15a7ecf3f224bc36517")
+
+    depends_on("py-setuptools@34.4:", type="build")
+    depends_on("py-setuptools-scm", type="build")
+    depends_on("py-botorch@0.8.3:", type=("build", "run"))
+    depends_on("python@3.8:", type=("build", "run"))
+    depends_on("py-jinja2", type=("build", "run"))
+    depends_on("py-pandas", type=("build", "run"))
+    depends_on("py-scipy", type=("build", "run"))
+    depends_on("py-scikit-learn", type=("build", "run"))
+    depends_on("py-ipywidgets", type=("build", "run"))
+    depends_on("py-typeguard@2.13.3", type=("build", "run"))
+    depends_on("py-plotly@5.12.0:", type=("build", "run"))
+
+    def setup_build_environment(self, env):
+        env.set("ALLOW_BOTORCH_LATEST", True)

var/spack/repos/builtin/packages/py-botorch/package.py

@@ -12,17 +12,30 @@ class PyBotorch(PythonPackage):
     homepage = "https://botorch.org/"
     pypi = "botorch/botorch-0.6.4.tar.gz"
 
-    maintainers("adamjstewart")
+    maintainers("adamjstewart", "meyersbs")
 
+    version("0.8.4", sha256="e2c17efa8fcda3c9353bbd14ba283ddf237d66151097c0af483bbaaaac61288b")
+    version("0.8.3", sha256="e529f7adbb2b54f46125ae904682fc0f0d02ab8bdb9067ede521c379b355bf73")
     version("0.6.4", sha256="3fd28417f55749501a45378f72cd5ca7614e2e05b7b65c6b4eb9b72378bc665a")
 
     depends_on("python@3.7:", type=("build", "run"))
-    # TODO: replace this after concretizer learns how to concretize separate build deps
+    depends_on("python@3.8:", when="@0.8.3:", type=("build", "run"))
     depends_on("py-setuptools", type="build")
-    # depends_on('py-setuptools@:47', type='build')
+    depends_on("py-setuptools@:47", when="@:0.6.4", type="build")
     depends_on("py-setuptools-scm", type="build")
+    depends_on("py-setuptools-scm+toml", when="@0.8.3:", type="build")
+    depends_on("py-torch@1.12:", when="@0.8.3:", type=("build", "run"))
     depends_on("py-torch@1.9:", type=("build", "run"))
+    depends_on("py-gpytorch@1.10:", when="@0.8.4:", type=("build", "run"))
+    depends_on("py-gpytorch@1.9.1:", when="@0.8.3:", type=("build", "run"))
     depends_on("py-gpytorch@1.6:", type=("build", "run"))
     depends_on("py-scipy", type=("build", "run"))
     depends_on("py-multipledispatch", type=("build", "run"))
-    depends_on("py-pyro-ppl@1.8.0", type=("build", "run"))
+    depends_on("py-pyro-ppl@1.8.4:", when="@0.8.3:", type=("build", "run"))
+    depends_on("py-pyro-ppl@1.8.0", when="@:0.6.4", type=("build", "run"))
+    depends_on("py-linear-operator@0.4.0:", when="@0.8.4:", type=("build", "run"))
+    depends_on("py-linear-operator@0.3.0:", when="@0.8.3:", type=("build", "run"))
+
+    def setup_build_environment(self, env):
+        if self.spec.satisfies("@0.8.3:"):
+            env.set("ALLOW_LATEST_GPYTORCH_LINOP", True)

var/spack/repos/builtin/packages/py-gpytorch/package.py

@@ -15,8 +15,10 @@ class PyGpytorch(PythonPackage):
     homepage = "https://gpytorch.ai/"
     pypi = "gpytorch/gpytorch-1.2.1.tar.gz"
 
-    maintainers("adamjstewart")
+    maintainers("adamjstewart", "meyersbs")
 
+    version("1.10", sha256="6dc978ab9fbf220a845a4f1ea13104180fc50e6934081f421b37f6120afb7f18")
+    version("1.9.1", sha256="0bdbba6f6d5957a0f43ef6dc7fec39c47e8a55f632ca33760c6189f259b3ccc3")
     version("1.9.0", sha256="a0608184c18a1f518d6a102473427abf00f5351421e12a934530953f6887b34b")
     version("1.8.1", sha256="fe8e412a73a2b07027e30c65c61323de15ebcef439f5bd21200cf26551fd0e30")
     version("1.8.0", sha256="d6c0c77d9a61f47feac2d19456816ccea1ed48c32c72d7ea33aa13b259e2a455")
@@ -40,5 +42,7 @@ class PyGpytorch(PythonPackage):
     depends_on("py-torch@1.5:", type=("build", "run"))
     depends_on("py-scikit-learn", when="@1.2:", type=("build", "run"))
     depends_on("py-linear-operator@0.1.1:", when="@1.9:", type=("build", "run"))
+    depends_on("py-linear-operator@0.2.0:", when="@1.9.1:", type=("build", "run"))
+    depends_on("py-linear-operator@0.4.0:", when="@1.10:", type=("build", "run"))
     depends_on("py-numpy", when="@1.7:1.8", type=("build", "run"))
     depends_on("py-scipy", when="@1.2:1.8", type=("build", "run"))

var/spack/repos/builtin/packages/py-linear-operator/package.py

@@ -13,6 +13,10 @@ class PyLinearOperator(PythonPackage):
     homepage = "https://github.com/cornellius-gp/linear_operator/"
     pypi = "linear_operator/linear_operator-0.1.1.tar.gz"
 
+    maintainers("meyersbs")
+
+    version("0.4.0", sha256="7c57c9f8f258c9785c0db4dd7625f4dd03a340313d7314cba0b633644909f5c6")
+    version("0.3.0", sha256="84bf572631a7e1576de6920d81600ca0fedcf6bda2f29dbaf440d6e72ce6abab")
     version("0.1.1", sha256="81adc1aea9e98f3c4f07f5608eb77b689bc61793e9beebfea82155e9237bf1be")
 
     depends_on("python@3.8:", type=("build", "run"))

var/spack/repos/builtin/packages/py-plotly/package.py

@@ -12,13 +12,18 @@ class PyPlotly(PythonPackage):
     homepage = "https://plot.ly/python/"
     pypi = "plotly/plotly-2.2.0.tar.gz"
 
+    maintainers("meyersbs")
+
+    version("5.14.1", sha256="bcac86d7fcba3eff7260c1eddc36ca34dae2aded10a0709808446565e0e53b93")
     version("5.2.2", sha256="809f0674a7991daaf4f287964d617d24e9fa44463acd5a5352ebd874cfd98b07")
     version("2.2.0", sha256="ca668911ffb4d11fed6d7fbb12236f8ecc6a7209db192326bcb64bdb41451a58")
 
     depends_on("python@3.6:", when="@5.2.2:", type=("build", "run"))
 
     depends_on("py-setuptools", type="build")
-    depends_on("py-six", type=("build", "run"))
+    depends_on("py-setuptools@40.8.0:", when="@5.14.1:", type="build")
+    depends_on("py-jupyterlab@3", when="@5:", type="build")
+    depends_on("py-six", when="@:5.2.2", type=("build", "run"))
 
     depends_on("py-pytz", when="@:2.2.0", type=("build", "run"))
     depends_on("py-decorator@4.0.6:", when="@:2.2.0", type=("build", "run"))
@@ -26,3 +31,4 @@ class PyPlotly(PythonPackage):
     depends_on("py-requests", when="@:2.2.0", type=("build", "run"))
 
     depends_on("py-tenacity@6.2.0:", when="@5.2.2:", type=("build", "run"))
+    depends_on("py-packaging", when="@5.14.1:", type=("build", "run"))

var/spack/repos/builtin/packages/py-pyro-ppl/package.py

@@ -12,8 +12,9 @@ class PyPyroPpl(PythonPackage):
     homepage = "https://pyro.ai/"
     pypi = "pyro-ppl/pyro-ppl-1.8.1.tar.gz"
 
-    maintainers("adamjstewart")
+    maintainers("adamjstewart", "meyersbs")
 
+    version("1.8.4", sha256="766fad61e52df48885de96d41213da1f8e8c1b79ecf308ad53189fcd15c1cb41")
     version("1.8.1", sha256="d7c049eb2e7485a612b4dd99c24c309cc860c7cbc6b1973387034f5436d1c8d6")
     version("1.8.0", sha256="68e4ea30f219227dd88e55de2550d3f8c20a20adbdb67ad1e13b50868bb2ac0c")
 

var/spack/repos/builtin/packages/py-typeguard/package.py

@@ -3,20 +3,28 @@
 #
 # SPDX-License-Identifier: (Apache-2.0 OR MIT)
 
-
 from spack.package import *
 
 
 class PyTypeguard(PythonPackage):
     """
-    Run-time type checker for Python
+    Run-time type checker for Python.
     """
 
     homepage = "https://github.com/agronholm/typeguard"
     pypi = "typeguard/typeguard-2.12.1.tar.gz"
 
+    maintainers("meyersbs")
+
+    version("3.0.2", sha256="fee5297fdb28f8e9efcb8142b5ee219e02375509cd77ea9d270b5af826358d5a")
+    version("2.13.3", sha256="00edaa8da3a133674796cf5ea87d9f4b4c367d77476e185e80251cc13dfbb8c4")
     version("2.12.1", sha256="c2af8b9bdd7657f4bd27b45336e7930171aead796711bc4cfc99b4731bb9d051")
 
-    depends_on("python@3.5.3:", type=("build", "run"))
+    depends_on("python@3.5.3:", when="@:2.13.3", type=("build", "run"))
-    depends_on("py-setuptools@42:", type="build")
+    depends_on("python@3.7.4:", when="@3.0.2:", type=("build", "run"))
-    depends_on("py-setuptools-scm@3.4:+toml", type="build")
+    depends_on("py-setuptools@42:", when="@:2.13.3", type="build")
+    depends_on("py-setuptools@64:", when="@3.0.2:", type="build")
+    depends_on("py-setuptools-scm@3.4:+toml", when="@:2.13.3", type="build")
+    depends_on("py-setuptools-scm@6.4:+toml", when="@3.0.2:", type="build")
+    depends_on("py-importlib-metadata@3.6:", when="@3.0.2: ^python@:3.9", type=("build", "run"))
+    depends_on("py-typing-extensions@4.4.0:", when="@3.0.2: ^python@:3.10", type=("build", "run"))