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Update for 'cdo'. (#5947)

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Sergey Kosukhin 2017-10-25 13:24:19 +02:00 committed by Todd Gamblin
parent e2ef033855
commit b92ddd72dd
1 changed files with 68 additions and 53 deletions
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121
var/spack/repos/builtin/packages/cdo/package.py
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@ -34,91 +34,106 @@ class Cdo(AutotoolsPackage):
url = 'https://code.mpimet.mpg.de/attachments/download/12760/cdo-1.7.2.tar.gz' url = 'https://code.mpimet.mpg.de/attachments/download/12760/cdo-1.7.2.tar.gz'
list_url = 'https://code.mpimet.mpg.de/projects/cdo/files' list_url = 'https://code.mpimet.mpg.de/projects/cdo/files'
version('1.9.1', 'e60a89f268ba24cee5c461f2c217829e')
version('1.9.0', '2d88561b3b4a880df0422a62e5027e40') version('1.9.0', '2d88561b3b4a880df0422a62e5027e40')
version('1.8.2', '6a2e2f99b7c67ee9a512c40a8d4a7121') version('1.8.2', '6a2e2f99b7c67ee9a512c40a8d4a7121')
version('1.7.2', 'f08e4ce8739a4f2b63fc81a24db3ee31') version('1.7.2', 'f08e4ce8739a4f2b63fc81a24db3ee31')
variant('szip', default=True, description='Enable szip compression for GRIB1')
variant('hdf5', default=False, description='Enable HDF5 support')
variant('netcdf', default=True, description='Enable NetCDF support') variant('netcdf', default=True, description='Enable NetCDF support')
variant('grib2', default='eccodes', values=('eccodes', 'grib-api', 'none'),
description='Specify GRIB2 backend')
variant('external-grib1', default=False,
description='Ignore the built-in support and use the external '
'GRIB2 backend for GRIB1 files')
variant('szip', default=True,
description='Enable szip compression for GRIB1')
variant('hdf5', default=True, description='Enable HDF5 support')
variant('udunits2', default=True, description='Enable UDUNITS2 support') variant('udunits2', default=True, description='Enable UDUNITS2 support')
variant('grib', default=True, description='Enable GRIB_API support')
variant('libxml2', default=True, description='Enable libxml2 support') variant('libxml2', default=True, description='Enable libxml2 support')
variant('proj', default=True, description='Enable PROJ library for cartographic projections') variant('proj', default=True,
description='Enable PROJ library for cartographic projections')
variant('curl', default=False, description='Enable curl support') variant('curl', default=False, description='Enable curl support')
variant('fftw', default=True, description='Enable support for fftw3') variant('fftw3', default=True, description='Enable support for fftw3')
variant('magics', default=False, description='Enable Magics library support') variant('magics', default=False,
description='Enable Magics library support')
variant('openmp', default=True, description='Enable OpenMP support') variant('openmp', default=True, description='Enable OpenMP support')
depends_on('szip', when='+szip')
depends_on('netcdf', when='+netcdf') depends_on('netcdf', when='+netcdf')
# In this case CDO does not depend on hdf5 directly but we need the backend
# of netcdf to be thread safe.
depends_on('hdf5+threadsafe', when='+netcdf')
depends_on('grib-api', when='grib2=grib-api')
depends_on('eccodes', when='grib2=eccodes')
depends_on('szip', when='+szip')
depends_on('hdf5+threadsafe', when='+hdf5') depends_on('hdf5+threadsafe', when='+hdf5')
depends_on('udunits2', when='+udunits2') depends_on('udunits2', when='+udunits2')
depends_on('grib-api', when='+grib')
depends_on('libxml2', when='+libxml2') depends_on('libxml2', when='+libxml2')
depends_on('proj', when='+proj') depends_on('proj', when='+proj')
depends_on('curl', when='+curl') depends_on('curl', when='+curl')
depends_on('fftw', when='+fftw') depends_on('fftw@3:', when='+fftw3')
depends_on('magics', when='+magics') depends_on('magics', when='+magics')
conflicts('grib2=eccodes', when='@:1.8',
msg='Eccodes is supported starting version 1.9.0')
conflicts('+szip', when='+external-grib1 grib2=none',
msg='The configuration does not support GRIB1')
def configure_args(self): def configure_args(self):
config_args = ['--enable-shared', '--enable-static'] config_args = self.with_or_without('netcdf', activation_value='prefix')
if self.spec.variants['grib2'].value == 'eccodes':
config_args.append('--with-eccodes=' +
self.spec['eccodes'].prefix)
config_args.append('--without-grib_api')
elif self.spec.variants['grib2'].value == 'grib-api':
config_args.append('--with-grib_api=' +
self.spec['grib-api'].prefix)
if self.spec.satisfies('@1.9:'):
config_args.append('--without-eccodes')
else:
config_args.append('--without-grib_api')
if self.spec.satisfies('@1.9:'):
config_args.append('--without-eccodes')
if '+external-grib1' in self.spec:
config_args.append('--disable-cgribex')
else:
config_args.append('--enable-cgribex')
if '+szip' in self.spec: if '+szip' in self.spec:
config_args.append('--with-szlib=' + self.spec['szip'].prefix) config_args.append('--with-szlib=' + self.spec['szip'].prefix)
else: else:
config_args.append('--without-szlib') config_args.append('--without-szlib')
if '+hdf5' in self.spec: config_args += self.with_or_without('hdf5',
config_args.append('--with-hdf5=' + self.spec['hdf5'].prefix) activation_value='prefix')
else:
config_args.append('--without-hdf5')
if '+netcdf' in self.spec: config_args += self.with_or_without('udunits2',
config_args.append('--with-netcdf=' + self.spec['netcdf'].prefix) activation_value='prefix')
else:
config_args.append('--without-netcdf')
if '+udunits2' in self.spec: config_args += self.with_or_without('libxml2',
config_args.append('--with-udunits2=' + activation_value='prefix')
self.spec['udunits2'].prefix)
else:
config_args.append('--without-udunits2')
if '+grib' in self.spec: config_args += self.with_or_without('proj',
config_args.append('--with-grib_api=' + activation_value='prefix')
self.spec['grib-api'].prefix)
else:
config_args.append('--without-grib_api')
if '+libxml2' in self.spec: config_args += self.with_or_without('curl',
config_args.append('--with-libxml2=' + self.spec['libxml2'].prefix) activation_value='prefix')
else:
config_args.append('--without-libxml2')
if '+proj' in self.spec: config_args += self.with_or_without('magics',
config_args.append('--with-proj=' + self.spec['proj'].prefix) activation_value='prefix')
else:
config_args.append('--without-proj')
if '+curl' in self.spec: config_args += self.with_or_without('fftw3')
config_args.append('--with-curl=' + self.spec['curl'].prefix)
else:
config_args.append('--without-curl')
if '+fftw' in self.spec: config_args += self.enable_or_disable('openmp')
config_args.append('--with-fftw3')
else:
config_args.append('--without-fftw3')
if '+magics' in self.spec: # Workaround for a problem in CDO
config_args.append('--with-magics=' + self.spec['magics'].prefix) if self.spec.satisfies('@1.9:+hdf5^hdf5+mpi'):
else: config_args.append('CXX=' + self.spec['mpi'].mpicxx)
config_args.append('--without-magics')
if '+openmp' in self.spec:
config_args.append('--enable-openmp')
else:
config_args.append('--disable-openmp')
return config_args return config_args