From b9b19e1660b92090cb519b8eccba46c08104edd8 Mon Sep 17 00:00:00 2001 From: "Adam J. Stewart" Date: Fri, 13 Apr 2018 00:08:10 -0500 Subject: [PATCH] Fix www.example.com homepages (#7744) --- var/spack/repos/builtin/packages/py-editdistance/package.py | 2 +- var/spack/repos/builtin/packages/r-cner/package.py | 2 +- var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py | 2 +- var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py | 2 +- var/spack/repos/builtin/packages/r-phangorn/package.py | 2 +- var/spack/repos/builtin/packages/r-yarn/package.py | 2 +- 6 files changed, 6 insertions(+), 6 deletions(-) diff --git a/var/spack/repos/builtin/packages/py-editdistance/package.py b/var/spack/repos/builtin/packages/py-editdistance/package.py index a36b40ea9bf..a62c6e49c5d 100644 --- a/var/spack/repos/builtin/packages/py-editdistance/package.py +++ b/var/spack/repos/builtin/packages/py-editdistance/package.py @@ -28,7 +28,7 @@ class PyEditdistance(PythonPackage): """Fast implementation of the edit distance (Levenshtein distance).""" - homepage = "http://www.example.com://github.com/aflc/editdistance" + homepage = "https://github.com/aflc/editdistance" url = "https://pypi.io/packages/source/e/editdistance/editdistance-0.4.tar.gz" version('0.4', '27434720ca0930a9b6974b182b6237bc') diff --git a/var/spack/repos/builtin/packages/r-cner/package.py b/var/spack/repos/builtin/packages/r-cner/package.py index 9ba532db403..3af527dec10 100644 --- a/var/spack/repos/builtin/packages/r-cner/package.py +++ b/var/spack/repos/builtin/packages/r-cner/package.py @@ -29,7 +29,7 @@ class RCner(RPackage): """"Large-scale identification and advanced visualization of sets of conserved noncoding elements.""" - homepage = "http://www.example.co://bioconductor.org/packages/CNEr/" + homepage = "https://bioconductor.org/packages/CNEr/" url = "https://git.bioconductor.org/packages/CNEr" version('1.14.0', git='https://git.bioconductor.org/packages/CNEr', commit='b8634d65c51728c815127e22b45eba7c9b9db897') diff --git a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py index 819d0a77ed0..92e6ba40899 100644 --- a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py +++ b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py @@ -29,7 +29,7 @@ class RGenomeinfodbdata(RPackage): """for mapping between NCBI taxonomy ID and species. Used by functions in the GenomeInfoDb package.""" - homepage = "http://www.example.co://bioconductor.org/packages/3.5/data/annotation/html/GenomeInfoDbData.html" + homepage = "https://bioconductor.org/packages/GenomeInfoDbData/" url = "https://bioconductor.org/packages/3.5/data/annotation/src/contrib/GenomeInfoDbData_0.99.0.tar.gz" version('0.99.0', '85977b51061dd02a90153db887040d05') diff --git a/var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py b/var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py index 406dd906bc1..a781deb8d04 100644 --- a/var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py +++ b/var/spack/repos/builtin/packages/r-org-hs-eg-db/package.py @@ -29,7 +29,7 @@ class ROrgHsEgDb(RPackage): """Genome wide annotation for Human, primarily based on mapping using Entrez Gene identifiers.""" - homepage = "http://www.example.co://www.bioconductor.org/packages/org.Hs.eg.db/i" + homepage = "https://bioconductor.org/packages/org.Hs.eg.db/" url = "https://www.bioconductor.org/packages/3.5/data/annotation/src/contrib/org.Hs.eg.db_3.4.1.tar.gz" version('3.4.1', '0a987ef7d6167df70e91e6f48145e41c') diff --git a/var/spack/repos/builtin/packages/r-phangorn/package.py b/var/spack/repos/builtin/packages/r-phangorn/package.py index 7997da71107..b43c9ce8251 100644 --- a/var/spack/repos/builtin/packages/r-phangorn/package.py +++ b/var/spack/repos/builtin/packages/r-phangorn/package.py @@ -31,7 +31,7 @@ class RPhangorn(RPackage): and Hadamard conjugation. Allows to compare trees, models selection and offers visualizations for trees and split networks.""" - homepage = "http://www.example.co://github.com/KlausVigo/phangorn" + homepage = "https://cran.r-project.org/package=phangorn" url = "https://cran.r-project.org/src/contrib/phangorn_2.3.1.tar.gz" list_url = "https://cran.r-project.org/src/contrib/Archive/phangorn" diff --git a/var/spack/repos/builtin/packages/r-yarn/package.py b/var/spack/repos/builtin/packages/r-yarn/package.py index 5ae0139ad18..6744f9cde10 100644 --- a/var/spack/repos/builtin/packages/r-yarn/package.py +++ b/var/spack/repos/builtin/packages/r-yarn/package.py @@ -33,7 +33,7 @@ class RYarn(RPackage): and statistical techniques to account for the large heterogeneity and sparsity found in very large RNA-seq experiments.""" - homepage = "http://www.example.co://www.bioconductor.org/packages/yarn/" + homepage = "https://bioconductor.org/packages/yarn/" url = "https://git.bioconductor.org/packages/yarn" list_url = homepage