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Switch http to https where latter exists (#25672)

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* Switch http to https where latter exists
* Hopefully restore original permissions
* Add URL updates after include the -L curl option
* Manual corrections to select URL format strings
This commit is contained in:
Tamara Dahlgren 2021-09-13 09:21:35 -07:00 committed by GitHub
parent 1e08f31e16
commit bafd84e191
No known key found for this signature in database
GPG Key ID: 4AEE18F83AFDEB23
339 changed files with 533 additions and 533 deletions
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4
var/spack/repos/builtin/packages/alps/package.py
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@ -13,12 +13,12 @@ class Alps(CMakePackage):
""" """
homepage = "https://alps.comp-phys.org" homepage = "https://alps.comp-phys.org"
url = "http://alps.comp-phys.org/static/software/releases/alps-2.3.0-src.tar.gz" url = "https://alps.comp-phys.org/static/software/releases/alps-2.3.0-src.tar.gz"
version('2.3.0', sha256='e64208d1e5acdd6f569277413c4867e1fa366cf4a224570eacbf1e9939fca2d2') version('2.3.0', sha256='e64208d1e5acdd6f569277413c4867e1fa366cf4a224570eacbf1e9939fca2d2')
# Refs for building from source and recipes # Refs for building from source and recipes
# http://alps.comp-phys.org/mediawiki/index.php/Building_ALPS_from_source # https://alps.comp-phys.org/mediawiki/index.php/Building_ALPS_from_source
# https://github.com/easybuilders/easybuild-easyconfigs/tree/master/easybuild/easyconfigs/a/ALPS # https://github.com/easybuilders/easybuild-easyconfigs/tree/master/easybuild/easyconfigs/a/ALPS
# https://github.com/conda-forge/alps-feedstock/tree/master/recipe # https://github.com/conda-forge/alps-feedstock/tree/master/recipe

2
var/spack/repos/builtin/packages/amber/package.py
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@ -16,7 +16,7 @@ class Amber(Package, CudaPackage):
A manual download is required for Ambers. Spack will search your current A manual download is required for Ambers. Spack will search your current
directory for the download files. Alternatively, add the files to a mirror directory for the download files. Alternatively, add the files to a mirror
so that Spack can find them. For instructions on how to set up a mirror, see so that Spack can find them. For instructions on how to set up a mirror, see
http://spack.readthedocs.io/en/latest/mirrors.html https://spack.readthedocs.io/en/latest/mirrors.html
Note: Only certain versions of ambertools are compatible with amber. Note: Only certain versions of ambertools are compatible with amber.
Only the latter version of ambertools for each amber version is supported. Only the latter version of ambertools for each amber version is supported.

14
var/spack/repos/builtin/packages/aocc/package.py
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@ -24,7 +24,7 @@ class Aocc(Package):
The AOCC Compiler Suite simplifies and accelerates development and The AOCC Compiler Suite simplifies and accelerates development and
tuning for x86 applications. tuning for x86 applications.
Please install only if you agree to terms and conditions depicted Please install only if you agree to terms and conditions depicted
under : http://developer.amd.com/wordpress/media/files/AOCC_EULA.pdf under : https://developer.amd.com/wordpress/media/files/AOCC_EULA.pdf
Example for installation: \'spack install aocc +license-agreed\' Example for installation: \'spack install aocc +license-agreed\'
''' '''
family = 'compiler' family = 'compiler'
@ -33,19 +33,19 @@ class Aocc(Package):
maintainers = ['amd-toolchain-support'] maintainers = ['amd-toolchain-support']
version(ver="3.1.0", sha256='1948104a430506fe5e445c0c796d6956109e7cc9fc0a1e32c9f1285cfd566d0c', version(ver="3.1.0", sha256='1948104a430506fe5e445c0c796d6956109e7cc9fc0a1e32c9f1285cfd566d0c',
url='http://developer.amd.com/wordpress/media/files/aocc-compiler-3.1.0.tar') url='https://developer.amd.com/wordpress/media/files/aocc-compiler-3.1.0.tar')
version(ver="3.0.0", sha256='4ff269b1693856b9920f57e3c85ce488c8b81123ddc88682a3ff283979362227', version(ver="3.0.0", sha256='4ff269b1693856b9920f57e3c85ce488c8b81123ddc88682a3ff283979362227',
url='http://developer.amd.com/wordpress/media/files/aocc-compiler-3.0.0.tar') url='https://developer.amd.com/wordpress/media/files/aocc-compiler-3.0.0.tar')
version(ver="2.3.0", sha256='9f8a1544a5268a7fb8cd21ac4bdb3f8d1571949d1de5ca48e2d3309928fc3d15', version(ver="2.3.0", sha256='9f8a1544a5268a7fb8cd21ac4bdb3f8d1571949d1de5ca48e2d3309928fc3d15',
url='http://developer.amd.com/wordpress/media/files/aocc-compiler-2.3.0.tar') url='https://developer.amd.com/wordpress/media/files/aocc-compiler-2.3.0.tar')
version(ver="2.2.0", sha256='500940ce36c19297dfba3aa56dcef33b6145867a1f34890945172ac2be83b286', version(ver="2.2.0", sha256='500940ce36c19297dfba3aa56dcef33b6145867a1f34890945172ac2be83b286',
url='http://developer.amd.com/wordpress/media/files/aocc-compiler-2.2.0.tar') url='https://developer.amd.com/wordpress/media/files/aocc-compiler-2.2.0.tar')
# Licensing # Licensing
license_required = True license_required = True
license_comment = '#' license_comment = '#'
license_files = ['AOCC_EULA.pdf'] license_files = ['AOCC_EULA.pdf']
license_url = 'http://developer.amd.com/wordpress/media/files/AOCC_EULA.pdf' license_url = 'https://developer.amd.com/wordpress/media/files/AOCC_EULA.pdf'
install_example = "spack install aocc +license-agreed" install_example = "spack install aocc +license-agreed"
depends_on('libxml2') depends_on('libxml2')
@ -60,7 +60,7 @@ class Aocc(Package):
@run_before('install') @run_before('install')
def abort_without_license_agreed(self): def abort_without_license_agreed(self):
license_url = 'http://developer.amd.com/wordpress/media/files/AOCC_EULA.pdf' license_url = 'https://developer.amd.com/wordpress/media/files/AOCC_EULA.pdf'
install_example = "spack install aocc +license-agreed" install_example = "spack install aocc +license-agreed"
if not self.spec.variants['license-agreed'].value: if not self.spec.variants['license-agreed'].value:
raise InstallError("\n\n\nNOTE:\nUse +license-agreed " + raise InstallError("\n\n\nNOTE:\nUse +license-agreed " +

2
var/spack/repos/builtin/packages/ascent/package.py
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@ -264,7 +264,7 @@ def create_host_config(self, spec, prefix, py_site_pkgs_dir=None):
all of the options used to configure and build ascent. all of the options used to configure and build ascent.
For more details about 'host-config' files see: For more details about 'host-config' files see:
http://ascent.readthedocs.io/en/latest/BuildingAscent.html https://ascent.readthedocs.io/en/latest/BuildingAscent.html
Note: Note:
The `py_site_pkgs_dir` arg exists to allow a package that The `py_site_pkgs_dir` arg exists to allow a package that

14
var/spack/repos/builtin/packages/astra/package.py
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@ -14,36 +14,36 @@ class Astra(Package):
version('2020-02-03', version('2020-02-03',
sha256='ca9ee7d3d369f9040fbd595f57f3153f712d789b66385fd2d2de88a69a774b83', sha256='ca9ee7d3d369f9040fbd595f57f3153f712d789b66385fd2d2de88a69a774b83',
expand=False, expand=False,
url='http://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/Astra') url='https://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/Astra')
# no longer available? # no longer available?
# version('2016-11-30', # version('2016-11-30',
# sha256='50738bf924724e2dd15f1d924b290ffb0f7c703e5d5ae02ffee2db554338801e', # sha256='50738bf924724e2dd15f1d924b290ffb0f7c703e5d5ae02ffee2db554338801e',
# expand=False, # expand=False,
# url='http://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/Astra') # url='https://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/Astra')
variant('gui', default=False, description='Install plotting/gui tools') variant('gui', default=False, description='Install plotting/gui tools')
resource(name='generator', url='http://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/generator', resource(name='generator', url='https://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/generator',
sha256='d31cf9fcfeb90ce0e729d8af628caf4a23f7e588a3d412d5b19241e8c684e531', sha256='d31cf9fcfeb90ce0e729d8af628caf4a23f7e588a3d412d5b19241e8c684e531',
expand=False, expand=False,
placement='generator') placement='generator')
resource(name='postpro', url='http://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/postpro', resource(name='postpro', url='https://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/postpro',
sha256='f47efb14748ce1da62bcd33c9411482bee89bcab75b28a678fc764db0c21ee8d', sha256='f47efb14748ce1da62bcd33c9411482bee89bcab75b28a678fc764db0c21ee8d',
expand=False, expand=False,
when='+gui', when='+gui',
placement='postpro') placement='postpro')
resource(name='fieldplot', url='http://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/fieldplot', resource(name='fieldplot', url='https://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/fieldplot',
sha256='89df1da96bfd9f165fa148b84376af558e6633ab2dda837273706143ff863c96', sha256='89df1da96bfd9f165fa148b84376af558e6633ab2dda837273706143ff863c96',
expand=False, expand=False,
when='+gui', when='+gui',
placement='fieldplot') placement='fieldplot')
resource(name='lineplot', url='http://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/lineplot', resource(name='lineplot', url='https://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/lineplot',
sha256='d2d5702be9cb3d96391c6a0ca37366d580ced1f0f722fb33a6039ad7fd43b69a', sha256='d2d5702be9cb3d96391c6a0ca37366d580ced1f0f722fb33a6039ad7fd43b69a',
expand=False, expand=False,
when='+gui', when='+gui',
placement='lineplot') placement='lineplot')
resource(name='pgxwin_server', url='http://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/pgxwin_server', resource(name='pgxwin_server', url='https://www.desy.de/~mpyflo/Astra_for_64_Bit_Linux/pgxwin_server',
sha256='d2d5702be9cb3d96391c6a0ca37366d580ced1f0f722fb33a6039ad7fd43b69a', sha256='d2d5702be9cb3d96391c6a0ca37366d580ced1f0f722fb33a6039ad7fd43b69a',
expand=False, expand=False,
when='+gui', when='+gui',

2
var/spack/repos/builtin/packages/astyle/package.py
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@ -14,7 +14,7 @@ class Astyle(MakefilePackage):
homepage = "http://astyle.sourceforge.net/" homepage = "http://astyle.sourceforge.net/"
url = "https://sourceforge.net/projects/astyle/files/astyle/astyle%203.0.1/astyle_3.0.1_linux.tar.gz" url = "https://sourceforge.net/projects/astyle/files/astyle/astyle%203.0.1/astyle_3.0.1_linux.tar.gz"
# Gentoo alternative # Gentoo alternative
# url = "http://distfiles.gentoo.org/distfiles/astyle_3.0.1_linux.tar.gz" # url = "https://distfiles.gentoo.org/distfiles/astyle_3.0.1_linux.tar.gz"
version('3.1', sha256='cbcc4cf996294534bb56f025d6f199ebfde81aa4c271ccbd5ee1c1a3192745d7') version('3.1', sha256='cbcc4cf996294534bb56f025d6f199ebfde81aa4c271ccbd5ee1c1a3192745d7')
version('3.0.1', sha256='6c3ab029e0e4a75e2e603d449014374aa8269218fdd03a4aaa46ab743b1912fd') version('3.0.1', sha256='6c3ab029e0e4a75e2e603d449014374aa8269218fdd03a4aaa46ab743b1912fd')

2
var/spack/repos/builtin/packages/atlas/package.py
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@ -30,7 +30,7 @@ class Atlas(Package):
# not all packages (e.g. Trilinos@12.6.3) stopped using deprecated in 3.6.0 # not all packages (e.g. Trilinos@12.6.3) stopped using deprecated in 3.6.0
# Lapack routines. Stick with 3.5.0 until this is fixed. # Lapack routines. Stick with 3.5.0 until this is fixed.
resource(name='lapack', resource(name='lapack',
url='http://www.netlib.org/lapack/lapack-3.5.0.tgz', url='https://www.netlib.org/lapack/lapack-3.5.0.tgz',
sha256='9ad8f0d3f3fb5521db49f2dd716463b8fb2b6bc9dc386a9956b8c6144f726352', sha256='9ad8f0d3f3fb5521db49f2dd716463b8fb2b6bc9dc386a9956b8c6144f726352',
destination='spack-resource-lapack', destination='spack-resource-lapack',
when='@3:') when='@3:')

2
var/spack/repos/builtin/packages/atompaw/package.py
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@ -16,7 +16,7 @@ class Atompaw(Package):
User's guide: ~/doc/atompaw-usersguide.pdf User's guide: ~/doc/atompaw-usersguide.pdf
""" """
homepage = "https://users.wfu.edu/natalie/papers/pwpaw/man.html" homepage = "https://users.wfu.edu/natalie/papers/pwpaw/man.html"
url = "http://users.wfu.edu/natalie/papers/pwpaw/atompaw-4.0.0.13.tar.gz" url = "https://users.wfu.edu/natalie/papers/pwpaw/atompaw-4.0.0.13.tar.gz"
version('4.1.1.0', sha256='b1ee2b53720066655d98523ef337e54850cb1e68b3a2da04ff5a1576d3893891') version('4.1.1.0', sha256='b1ee2b53720066655d98523ef337e54850cb1e68b3a2da04ff5a1576d3893891')
version('4.0.0.13', sha256='cbd73f11f3e9cc3ff2e5f3ec87498aeaf439555903d0b95a72f3b0a021902020') version('4.0.0.13', sha256='cbd73f11f3e9cc3ff2e5f3ec87498aeaf439555903d0b95a72f3b0a021902020')

2
var/spack/repos/builtin/packages/atop/package.py
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@ -9,7 +9,7 @@
class Atop(Package): class Atop(Package):
"""Atop is an ASCII full-screen performance monitor for Linux""" """Atop is an ASCII full-screen performance monitor for Linux"""
homepage = "https://www.atoptool.nl/index.php" homepage = "https://www.atoptool.nl/index.php"
url = "http://www.atoptool.nl/download/atop-2.2-3.tar.gz" url = "https://www.atoptool.nl/download/atop-2.2-3.tar.gz"
version('2.5.0', sha256='4b911057ce50463b6e8b3016c5963d48535c0cddeebc6eda817e292b22f93f33') version('2.5.0', sha256='4b911057ce50463b6e8b3016c5963d48535c0cddeebc6eda817e292b22f93f33')
version('2.4.0', sha256='be1c010a77086b7d98376fce96514afcd73c3f20a8d1fe01520899ff69a73d69') version('2.4.0', sha256='be1c010a77086b7d98376fce96514afcd73c3f20a8d1fe01520899ff69a73d69')

2
var/spack/repos/builtin/packages/attr/package.py
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@ -28,7 +28,7 @@ def configure_args(self):
args.append('--disable-static') args.append('--disable-static')
return args return args
# Ref. http://www.linuxfromscratch.org/blfs/view/7.5/postlfs/attr.html # Ref. https://www.linuxfromscratch.org/blfs/view/7.5/postlfs/attr.html
def install(self, spec, prefix): def install(self, spec, prefix):
if self.version >= Version('2.4.48'): if self.version >= Version('2.4.48'):
make('install') make('install')

4
var/spack/repos/builtin/packages/augustus/package.py
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@ -21,9 +21,9 @@ class Augustus(MakefilePackage):
version('3.3.1-tag1', sha256='011379606f381ee21b9716f83e8a1a57b2aaa01aefeebd2748104efa08c47cab', version('3.3.1-tag1', sha256='011379606f381ee21b9716f83e8a1a57b2aaa01aefeebd2748104efa08c47cab',
url='https://github.com/Gaius-Augustus/Augustus/archive/v3.3.1-tag1.tar.gz') url='https://github.com/Gaius-Augustus/Augustus/archive/v3.3.1-tag1.tar.gz')
version('3.3', sha256='b5eb811a4c33a2cc3bbd16355e19d530eeac6d1ac923e59f48d7a79f396234ee', version('3.3', sha256='b5eb811a4c33a2cc3bbd16355e19d530eeac6d1ac923e59f48d7a79f396234ee',
url='http://bioinf.uni-greifswald.de/augustus/binaries/old/augustus-3.3.tar.gz') url='https://bioinf.uni-greifswald.de/augustus/binaries/old/augustus-3.3.tar.gz')
version('3.2.3', sha256='a1af128aefd228dea0c46d6f5234910fdf068a2b9133175ca8da3af639cb4514', version('3.2.3', sha256='a1af128aefd228dea0c46d6f5234910fdf068a2b9133175ca8da3af639cb4514',
url='http://bioinf.uni-greifswald.de/augustus/binaries/old/augustus-3.2.3.tar.gz') url='https://bioinf.uni-greifswald.de/augustus/binaries/old/augustus-3.2.3.tar.gz')
depends_on('perl', type=('build', 'run')) depends_on('perl', type=('build', 'run'))
depends_on('python', when='@3.3.1:', type=('build', 'run')) depends_on('python', when='@3.3.1:', type=('build', 'run'))

2
var/spack/repos/builtin/packages/autofact/package.py
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@ -12,7 +12,7 @@ class Autofact(Package):
"""An Automatic Functional Annotation and Classification Tool""" """An Automatic Functional Annotation and Classification Tool"""
homepage = "https://megasun.bch.umontreal.ca/Software/AutoFACT.htm" homepage = "https://megasun.bch.umontreal.ca/Software/AutoFACT.htm"
url = "http://megasun.bch.umontreal.ca/Software/AutoFACT_v3_4.tar" url = "https://megasun.bch.umontreal.ca/Software/AutoFACT_v3_4.tar"
version('3_4', sha256='1465d263b19adb42f01f6e636ac40ef1c2e3dbd63461f977b89da9493fe9c6f4') version('3_4', sha256='1465d263b19adb42f01f6e636ac40ef1c2e3dbd63461f977b89da9493fe9c6f4')

2
var/spack/repos/builtin/packages/bamutil/package.py
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@ -13,7 +13,7 @@ class Bamutil(MakefilePackage):
""" """
homepage = "https://genome.sph.umich.edu/wiki/BamUtil" homepage = "https://genome.sph.umich.edu/wiki/BamUtil"
url = "http://genome.sph.umich.edu/w/images/7/70/BamUtilLibStatGen.1.0.13.tgz" url = "https://genome.sph.umich.edu/w/images/7/70/BamUtilLibStatGen.1.0.13.tgz"
version('1.0.13', sha256='16c1d01c37d1f98b98c144f3dd0fda6068c1902f06bd0989f36ce425eb0c592b') version('1.0.13', sha256='16c1d01c37d1f98b98c144f3dd0fda6068c1902f06bd0989f36ce425eb0c592b')

2
var/spack/repos/builtin/packages/beagle/package.py
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@ -15,7 +15,7 @@ class Beagle(Package):
homepage = "https://faculty.washington.edu/browning/beagle/beagle.html" homepage = "https://faculty.washington.edu/browning/beagle/beagle.html"
version('5.1', sha256='994f926a4ec0eac665631f37c4a961d3f75c966c71841079275364013c90996c', version('5.1', sha256='994f926a4ec0eac665631f37c4a961d3f75c966c71841079275364013c90996c',
expand=False, url='http://faculty.washington.edu/browning/beagle/beagle.25Nov19.28d.jar') expand=False, url='https://faculty.washington.edu/browning/beagle/beagle.25Nov19.28d.jar')
version('5.0', sha256='8390fe18b53786b676b67dddae6d1c086d6225e518f6a82047f4138196b48621', version('5.0', sha256='8390fe18b53786b676b67dddae6d1c086d6225e518f6a82047f4138196b48621',
expand=False, url='https://faculty.washington.edu/browning/beagle/beagle.12Jul19.0df.jar') expand=False, url='https://faculty.washington.edu/browning/beagle/beagle.12Jul19.0df.jar')
version('4.1', sha256='6c94610b278fc108c3e80b1134226911be1fc92b7d378ba648ac3eb97c5a3207', version('4.1', sha256='6c94610b278fc108c3e80b1134226911be1fc92b7d378ba648ac3eb97c5a3207',

2
var/spack/repos/builtin/packages/berkeley-db/package.py
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@ -9,7 +9,7 @@ class BerkeleyDb(AutotoolsPackage):
homepage = "https://www.oracle.com/database/technologies/related/berkeleydb.html" homepage = "https://www.oracle.com/database/technologies/related/berkeleydb.html"
# URL must remain http:// so Spack can bootstrap curl # URL must remain http:// so Spack can bootstrap curl
url = "http://download.oracle.com/berkeley-db/db-18.1.40.tar.gz" url = "https://download.oracle.com/berkeley-db/db-18.1.40.tar.gz"
version("18.1.40", sha256="0cecb2ef0c67b166de93732769abdeba0555086d51de1090df325e18ee8da9c8") version("18.1.40", sha256="0cecb2ef0c67b166de93732769abdeba0555086d51de1090df325e18ee8da9c8")
version('18.1.32', sha256='fa1fe7de9ba91ad472c25d026f931802597c29f28ae951960685cde487c8d654', deprecated=True) version('18.1.32', sha256='fa1fe7de9ba91ad472c25d026f931802597c29f28ae951960685cde487c8d654', deprecated=True)

2
var/spack/repos/builtin/packages/blogbench/package.py
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@ -10,7 +10,7 @@ class Blogbench(AutotoolsPackage):
"""A filesystem benchmark tool that simulates a realistic load.""" """A filesystem benchmark tool that simulates a realistic load."""
homepage = "https://openbenchmarking.org/test/pts/blogbench" homepage = "https://openbenchmarking.org/test/pts/blogbench"
url = "http://download.pureftpd.org/pub/blogbench/blogbench-1.1.tar.gz" url = "https://download.pureftpd.org/pub/blogbench/blogbench-1.1.tar.gz"
version('1.1', sha256='8cded059bfdbccb7be35bb6a2272ecfdbe3fbea43d53c92ba5572ac24f26c4df') version('1.1', sha256='8cded059bfdbccb7be35bb6a2272ecfdbe3fbea43d53c92ba5572ac24f26c4df')
version('1.0', sha256='dc29261a19064a8fb64d39b27607f19d3b33ce3795908e717404167687ef33be') version('1.0', sha256='dc29261a19064a8fb64d39b27607f19d3b33ce3795908e717404167687ef33be')

2
var/spack/repos/builtin/packages/bmake/package.py
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@ -10,7 +10,7 @@ class Bmake(Package):
"""Portable version of NetBSD make(1).""" """Portable version of NetBSD make(1)."""
homepage = "https://www.crufty.net/help/sjg/bmake.htm" homepage = "https://www.crufty.net/help/sjg/bmake.htm"
url = "http://www.crufty.net/ftp/pub/sjg/bmake-20180512.tar.gz" url = "https://www.crufty.net/ftp/pub/sjg/bmake-20180512.tar.gz"
version('20200710', sha256='6538fc4319ef79d178dca76d3b869f7aa93a9bb7b510df08a7d872c01a56b76c') version('20200710', sha256='6538fc4319ef79d178dca76d3b869f7aa93a9bb7b510df08a7d872c01a56b76c')
version('20180512', sha256='ac3cd262065fcc20c1dec7c95f06306c8138b3e17025b949343a06a8980a5508') version('20180512', sha256='ac3cd262065fcc20c1dec7c95f06306c8138b3e17025b949343a06a8980a5508')

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var/spack/repos/builtin/packages/boost/package.py
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@ -21,7 +21,7 @@ class Boost(Package):
homepage = "https://www.boost.org" homepage = "https://www.boost.org"
url = "http://downloads.sourceforge.net/project/boost/boost/1.55.0/boost_1_55_0.tar.bz2" url = "http://downloads.sourceforge.net/project/boost/boost/1.55.0/boost_1_55_0.tar.bz2"
git = "https://github.com/boostorg/boost.git" git = "https://github.com/boostorg/boost.git"
list_url = "http://sourceforge.net/projects/boost/files/boost/" list_url = "https://sourceforge.net/projects/boost/files/boost/"
list_depth = 1 list_depth = 1
maintainers = ['hainest'] maintainers = ['hainest']
@ -248,7 +248,7 @@ def libs(self):
patch('bootstrap-path.patch', when='@1.39.0: platform=cray') patch('bootstrap-path.patch', when='@1.39.0: platform=cray')
# Patch fix for warnings from commits 2d37749, af1dc84, c705bab, and # Patch fix for warnings from commits 2d37749, af1dc84, c705bab, and
# 0134441 on http://github.com/boostorg/system. # 0134441 on https://github.com/boostorg/system.
patch('system-non-virtual-dtor-include.patch', when='@1.69.0', patch('system-non-virtual-dtor-include.patch', when='@1.69.0',
level=2) level=2)
patch('system-non-virtual-dtor-test.patch', when='@1.69.0', patch('system-non-virtual-dtor-test.patch', when='@1.69.0',
@ -474,7 +474,7 @@ def determine_b2_options(self, spec, options):
# clang is not officially supported for pre-compiled headers # clang is not officially supported for pre-compiled headers
# and at least in clang 3.9 still fails to build # and at least in clang 3.9 still fails to build
# http://www.boost.org/build/doc/html/bbv2/reference/precompiled_headers.html # https://www.boost.org/build/doc/html/bbv2/reference/precompiled_headers.html
# https://svn.boost.org/trac/boost/ticket/12496 # https://svn.boost.org/trac/boost/ticket/12496
if (spec.satisfies('%apple-clang') or if (spec.satisfies('%apple-clang') or
spec.satisfies('%clang') or spec.satisfies('%clang') or

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var/spack/repos/builtin/packages/braker/package.py
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@ -17,7 +17,7 @@ class Braker(Package):
version('2.1.6', sha256='eef3c4037364472988a010322cbd79b5171158f9c016f4383809adade4866c06') version('2.1.6', sha256='eef3c4037364472988a010322cbd79b5171158f9c016f4383809adade4866c06')
version('2.1.4', sha256='d48af5649cc879343046f9ddf180fe2c709b5810e0b78cf314bf298514d31d52') version('2.1.4', sha256='d48af5649cc879343046f9ddf180fe2c709b5810e0b78cf314bf298514d31d52')
version('1.11', sha256='cb2d9abe1720ed58753d362eee4af3791007efc617754804882d31f9fe2eab00', version('1.11', sha256='cb2d9abe1720ed58753d362eee4af3791007efc617754804882d31f9fe2eab00',
url='http://bioinf.uni-greifswald.de/augustus/binaries/old/BRAKER1_v1.11.tar.gz') url='https://bioinf.uni-greifswald.de/augustus/binaries/old/BRAKER1_v1.11.tar.gz')
depends_on('perl', type=('build', 'run')) depends_on('perl', type=('build', 'run'))
depends_on('perl-scalar-util-numeric', type=('build', 'run')) depends_on('perl-scalar-util-numeric', type=('build', 'run'))

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var/spack/repos/builtin/packages/bref3/package.py
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@ -14,7 +14,7 @@ class Bref3(Package):
homepage = "https://faculty.washington.edu/browning/beagle/beagle.html" homepage = "https://faculty.washington.edu/browning/beagle/beagle.html"
version('2019-11-25', sha256='969c0881050c4a48d19be9ea64bf49fa68c1403b69f9f739bbfd865dda639b2d', version('2019-11-25', sha256='969c0881050c4a48d19be9ea64bf49fa68c1403b69f9f739bbfd865dda639b2d',
expand=False, url='http://faculty.washington.edu/browning/beagle/bref3.25Nov19.28d.jar') expand=False, url='https://faculty.washington.edu/browning/beagle/bref3.25Nov19.28d.jar')
version('2019-07-12', sha256='8a9c3b6c38e36ef4c05a61108f083005fd985026c67d75a8173088f88816a202', version('2019-07-12', sha256='8a9c3b6c38e36ef4c05a61108f083005fd985026c67d75a8173088f88816a202',
expand=False, url='https://faculty.washington.edu/browning/beagle/bref3.12Jul19.0df.jar') expand=False, url='https://faculty.washington.edu/browning/beagle/bref3.12Jul19.0df.jar')
version('2018-01-27', sha256='4d32f0b6d536c88d5332d961309466c8c3dd9572907a3755450d26d7ba841083', version('2018-01-27', sha256='4d32f0b6d536c88d5332d961309466c8c3dd9572907a3755450d26d7ba841083',

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var/spack/repos/builtin/packages/cachefilesd/package.py
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@ -12,7 +12,7 @@ class Cachefilesd(MakefilePackage):
persistent caching to the local disk.""" persistent caching to the local disk."""
homepage = "https://people.redhat.com/~dhowells/fscache" homepage = "https://people.redhat.com/~dhowells/fscache"
url = "http://people.redhat.com/~dhowells/fscache/cachefilesd-0.10.tar.bz2" url = "https://people.redhat.com/~dhowells/fscache/cachefilesd-0.10.tar.bz2"
version('0.10.10', sha256='0d0309851efabd02b7c849f73535b8ad3f831570e83e4f65e42354da18e11a02') version('0.10.10', sha256='0d0309851efabd02b7c849f73535b8ad3f831570e83e4f65e42354da18e11a02')
version('0.10.9', sha256='c897ec6704615f26de3ddc20ff30a191ce995cb8973d2cde88b4b28c1a1e6bca') version('0.10.9', sha256='c897ec6704615f26de3ddc20ff30a191ce995cb8973d2cde88b4b28c1a1e6bca')

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var/spack/repos/builtin/packages/catalyst/package.py
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@ -18,9 +18,9 @@ class Catalyst(CMakePackage):
simulation and analysis and/or visualization tasks.""" simulation and analysis and/or visualization tasks."""
homepage = 'http://www.paraview.org' homepage = 'http://www.paraview.org'
url = "http://www.paraview.org/files/v5.5/ParaView-v5.5.2.tar.gz" url = "https://www.paraview.org/files/v5.5/ParaView-v5.5.2.tar.gz"
_urlfmt_gz = 'http://www.paraview.org/files/v{0}/ParaView-v{1}{2}.tar.gz' _urlfmt_gz = 'https://www.paraview.org/files/v{0}/ParaView-v{1}{2}.tar.gz'
_urlfmt_xz = 'http://www.paraview.org/files/v{0}/ParaView-v{1}{2}.tar.xz' _urlfmt_xz = 'https://www.paraview.org/files/v{0}/ParaView-v{1}{2}.tar.xz'
maintainers = ['chuckatkins', 'danlipsa'] maintainers = ['chuckatkins', 'danlipsa']

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var/spack/repos/builtin/packages/cblas/package.py
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@ -15,7 +15,7 @@ class Cblas(Package):
# tarball has no version, but on the date below, this MD5 was correct. # tarball has no version, but on the date below, this MD5 was correct.
version('2015-06-06', sha256='0f6354fd67fabd909baf57ced2ef84e962db58fae126e4f41b21dd4fec60a2a3', version('2015-06-06', sha256='0f6354fd67fabd909baf57ced2ef84e962db58fae126e4f41b21dd4fec60a2a3',
url='http://www.netlib.org/blas/blast-forum/cblas.tgz') url='https://www.netlib.org/blas/blast-forum/cblas.tgz')
depends_on('blas') depends_on('blas')
parallel = False parallel = False

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var/spack/repos/builtin/packages/cdd/package.py
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@ -14,7 +14,7 @@ class Cdd(Package):
a general convex polyhedron given by a system of linear a general convex polyhedron given by a system of linear
inequalities""" inequalities"""
homepage = "https://www.inf.ethz.ch/personal/fukudak/cdd_home/cdd.html" homepage = "https://www.inf.ethz.ch/personal/fukudak/cdd_home/cdd.html"
url = "http://www.cs.mcgill.ca/~fukuda/download/cdd/cdd-061a.tar.gz" url = "https://www.cs.mcgill.ca/~fukuda/download/cdd/cdd-061a.tar.gz"
version('0.61a', sha256='637a1909bbd8aa4d32667da08f9e9ac687bf7d3ef1b8af5bd227e91a3cd4019b') version('0.61a', sha256='637a1909bbd8aa4d32667da08f9e9ac687bf7d3ef1b8af5bd227e91a3cd4019b')

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var/spack/repos/builtin/packages/cgal/package.py
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@ -35,11 +35,11 @@ class Cgal(CMakePackage):
description='Install in header only mode') description='Install in header only mode')
# ---- See "7 CGAL Libraries" at: # ---- See "7 CGAL Libraries" at:
# http://doc.cgal.org/latest/Manual/installation.html # https://doc.cgal.org/latest/Manual/installation.html
# The CORE library provides exact arithmetic for geometric computations. # The CORE library provides exact arithmetic for geometric computations.
# See: http://cs.nyu.edu/exact/core_pages/ # See: https://cs.nyu.edu/exact/core_pages/
# http://cs.nyu.edu/exact/core_pages/svn-core.html # https://cs.nyu.edu/exact/core_pages/svn-core.html
variant('core', default=False, variant('core', default=False,
description='Build the CORE library for algebraic numbers') description='Build the CORE library for algebraic numbers')
variant('imageio', default=False, variant('imageio', default=False,
@ -91,7 +91,7 @@ def setup_build_environment(self, env):
def cmake_args(self): def cmake_args(self):
# Installation instructions: # Installation instructions:
# http://doc.cgal.org/latest/Manual/installation.html # https://doc.cgal.org/latest/Manual/installation.html
spec = self.spec spec = self.spec
variant_bool = lambda feature: str(feature in spec) variant_bool = lambda feature: str(feature in spec)
cmake_args = [] cmake_args = []

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var/spack/repos/builtin/packages/chombo/package.py
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@ -11,7 +11,7 @@ class Chombo(MakefilePackage):
logically rectangular (i.e. Cartesian) grids.""" logically rectangular (i.e. Cartesian) grids."""
homepage = "https://commons.lbl.gov/display/chombo" homepage = "https://commons.lbl.gov/display/chombo"
git = "http://bitbucket.org/drhansj/chombo-xsdk.git" git = "https://bitbucket.org/drhansj/chombo-xsdk.git"
tags = ['ecp', 'ecp-apps'] tags = ['ecp', 'ecp-apps']

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var/spack/repos/builtin/packages/clapack/package.py
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@ -16,7 +16,7 @@ class Clapack(MakefilePackage):
compiler.""" compiler."""
homepage = "https://www.netlib.org/clapack/" homepage = "https://www.netlib.org/clapack/"
url = "http://www.netlib.org/clapack/clapack.tgz" url = "https://www.netlib.org/clapack/clapack.tgz"
version('3.2.1', sha256='6dc4c382164beec8aaed8fd2acc36ad24232c406eda6db462bd4c41d5e455fac') version('3.2.1', sha256='6dc4c382164beec8aaed8fd2acc36ad24232c406eda6db462bd4c41d5e455fac')

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var/spack/repos/builtin/packages/clhep/package.py
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@ -10,7 +10,7 @@
class Clhep(CMakePackage): class Clhep(CMakePackage):
"""CLHEP is a C++ Class Library for High Energy Physics. """ """CLHEP is a C++ Class Library for High Energy Physics. """
homepage = "https://proj-clhep.web.cern.ch/proj-clhep/" homepage = "https://proj-clhep.web.cern.ch/proj-clhep/"
url = "http://proj-clhep.web.cern.ch/proj-clhep/dist1/clhep-2.4.1.3.tgz" url = "https://proj-clhep.web.cern.ch/proj-clhep/dist1/clhep-2.4.1.3.tgz"
list_url = "https://proj-clhep.web.cern.ch/proj-clhep/" list_url = "https://proj-clhep.web.cern.ch/proj-clhep/"
list_depth = 1 list_depth = 1

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var/spack/repos/builtin/packages/cloverleaf/package.py
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@ -11,7 +11,7 @@ class Cloverleaf(MakefilePackage):
""" """
homepage = "https://uk-mac.github.io/CloverLeaf" homepage = "https://uk-mac.github.io/CloverLeaf"
url = "http://downloads.mantevo.org/releaseTarballs/miniapps/CloverLeaf/CloverLeaf-1.1.tar.gz" url = "https://downloads.mantevo.org/releaseTarballs/miniapps/CloverLeaf/CloverLeaf-1.1.tar.gz"
git = "https://github.com/UK-MAC/CloverLeaf.git" git = "https://github.com/UK-MAC/CloverLeaf.git"
tags = ['proxy-app'] tags = ['proxy-app']

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var/spack/repos/builtin/packages/cloverleaf3d/package.py
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@ -12,7 +12,7 @@ class Cloverleaf3d(MakefilePackage):
""" """
homepage = "https://uk-mac.github.io/CloverLeaf3D/" homepage = "https://uk-mac.github.io/CloverLeaf3D/"
url = "http://downloads.mantevo.org/releaseTarballs/miniapps/CloverLeaf3D/CloverLeaf3D-1.0.tar.gz" url = "https://downloads.mantevo.org/releaseTarballs/miniapps/CloverLeaf3D/CloverLeaf3D-1.0.tar.gz"
tags = ["proxy-app"] tags = ["proxy-app"]

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var/spack/repos/builtin/packages/coinhsl/package.py
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@ -19,7 +19,7 @@ class Coinhsl(AutotoolsPackage):
of CoinHSL yourself. Spack will search your current directory for of CoinHSL yourself. Spack will search your current directory for
the download file. Alternatively, add this file to a mirror so the download file. Alternatively, add this file to a mirror so
that Spack can find it. For instructions on how to set up a that Spack can find it. For instructions on how to set up a
mirror, see http://spack.readthedocs.io/en/latest/mirrors.html""" mirror, see https://spack.readthedocs.io/en/latest/mirrors.html"""
# NOTE(oxberry1@llnl.gov): an HTTPS version of the URL below does not # NOTE(oxberry1@llnl.gov): an HTTPS version of the URL below does not
# exist # exist
@ -33,13 +33,13 @@ class Coinhsl(AutotoolsPackage):
# Version 2019.05.21 is a full-featured "release candidate" # Version 2019.05.21 is a full-featured "release candidate"
# version available via an "academic license" that can be used for # version available via an "academic license" that can be used for
# personal teaching and research purposes only. For a full list of # personal teaching and research purposes only. For a full list of
# conditions, see http://www.hsl.rl.ac.uk/academic.html. # conditions, see https://www.hsl.rl.ac.uk/academic.html.
version('2019.05.21', sha256='95ce1160f0b013151a3e25d40337775c760a8f3a79d801a1d190598bf4e4c0c3') version('2019.05.21', sha256='95ce1160f0b013151a3e25d40337775c760a8f3a79d801a1d190598bf4e4c0c3')
# Version 2015.06.23 is a full-featured "stable" # Version 2015.06.23 is a full-featured "stable"
# version available via an "academic license" that can be used for # version available via an "academic license" that can be used for
# personal teaching and research purposes only. For a full list of # personal teaching and research purposes only. For a full list of
# conditions, see http://www.hsl.rl.ac.uk/academic.html. # conditions, see https://www.hsl.rl.ac.uk/academic.html.
version('2015.06.23', sha256='3e955a2072f669b8f357ae746531b37aea921552e415dc219a5dd13577575fb3', version('2015.06.23', sha256='3e955a2072f669b8f357ae746531b37aea921552e415dc219a5dd13577575fb3',
preferred=True) preferred=True)

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var/spack/repos/builtin/packages/colm/package.py
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@ -14,6 +14,6 @@ class Colm(AutotoolsPackage):
""" """
homepage = "https://www.colm.net/open-source/colm" homepage = "https://www.colm.net/open-source/colm"
url = "http://www.colm.net/files/colm/colm-0.12.0.tar.gz" url = "https://www.colm.net/files/colm/colm-0.12.0.tar.gz"
version('0.12.0', sha256='7b545d74bd139f5c622975d243c575310af1e4985059a1427b6fdbb1fb8d6e4d') version('0.12.0', sha256='7b545d74bd139f5c622975d243c575310af1e4985059a1427b6fdbb1fb8d6e4d')

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var/spack/repos/builtin/packages/commons-logging/package.py
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@ -19,7 +19,7 @@ class CommonsLogging(Package):
adapters for others is a reasonably simple task.""" adapters for others is a reasonably simple task."""
homepage = "https://commons.apache.org/proper/commons-logging/" homepage = "https://commons.apache.org/proper/commons-logging/"
url = "http://archive.apache.org/dist/commons/logging/binaries/commons-logging-1.2-bin.tar.gz" url = "https://archive.apache.org/dist/commons/logging/binaries/commons-logging-1.2-bin.tar.gz"
version('1.2', sha256='3f758805c7290d9c6d22d1451587c9f7232744aef4c984e88aa683cdea0587bd') version('1.2', sha256='3f758805c7290d9c6d22d1451587c9f7232744aef4c984e88aa683cdea0587bd')
version('1.1.3', sha256='9e7093c93529792563b5c19ab5cccb73ef4ca7d82b886bdec6d0af182ba9908a') version('1.1.3', sha256='9e7093c93529792563b5c19ab5cccb73ef4ca7d82b886bdec6d0af182ba9908a')

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var/spack/repos/builtin/packages/converge/package.py
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@ -82,7 +82,7 @@ class Converge(Package):
license_comment = '#' license_comment = '#'
license_files = ['license/license.lic'] license_files = ['license/license.lic']
license_vars = ['RLM_LICENSE'] license_vars = ['RLM_LICENSE']
license_url = 'http://www.reprisesoftware.com/RLM_License_Administration.pdf' license_url = 'https://www.reprisesoftware.com/RLM_License_Administration.pdf'
def url_for_version(self, version): def url_for_version(self, version):
url = "https://download.convergecfd.com/download/CONVERGE_{0}/Full_Solver_Packages/converge_install_{1}.tar.gz" url = "https://download.convergecfd.com/download/CONVERGE_{0}/Full_Solver_Packages/converge_install_{1}.tar.gz"

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var/spack/repos/builtin/packages/couchdb/package.py
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@ -12,7 +12,7 @@ class Couchdb(AutotoolsPackage):
for reading and updating (add, edit, delete) database documents.""" for reading and updating (add, edit, delete) database documents."""
homepage = "https://couchdb.apache.org/" homepage = "https://couchdb.apache.org/"
url = "http://archive.apache.org/dist/couchdb/source/3.1.0/apache-couchdb-3.1.0.tar.gz" url = "https://archive.apache.org/dist/couchdb/source/3.1.0/apache-couchdb-3.1.0.tar.gz"
version('3.1.0', sha256='4867c796a1ff6f0794b7bd3863089ea6397bd5c47544f9b97db8cdacff90f8ed') version('3.1.0', sha256='4867c796a1ff6f0794b7bd3863089ea6397bd5c47544f9b97db8cdacff90f8ed')
version('3.0.1', sha256='08d61d5c779957d074d5097f28a2dfc9eb518af3c479d5318135ff31212cc522') version('3.0.1', sha256='08d61d5c779957d074d5097f28a2dfc9eb518af3c479d5318135ff31212cc522')

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var/spack/repos/builtin/packages/cppunit/package.py
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@ -10,7 +10,7 @@ class Cppunit(AutotoolsPackage):
"""Obsolete Unit testing framework for C++""" """Obsolete Unit testing framework for C++"""
homepage = "https://wiki.freedesktop.org/www/Software/cppunit/" homepage = "https://wiki.freedesktop.org/www/Software/cppunit/"
url = "http://dev-www.libreoffice.org/src/cppunit-1.13.2.tar.gz" url = "https://dev-www.libreoffice.org/src/cppunit-1.13.2.tar.gz"
version('1.14.0', sha256='3d569869d27b48860210c758c4f313082103a5e58219a7669b52bfd29d674780') version('1.14.0', sha256='3d569869d27b48860210c758c4f313082103a5e58219a7669b52bfd29d674780')
version('1.13.2', sha256='3f47d246e3346f2ba4d7c9e882db3ad9ebd3fcbd2e8b732f946e0e3eeb9f429f') version('1.13.2', sha256='3f47d246e3346f2ba4d7c9e882db3ad9ebd3fcbd2e8b732f946e0e3eeb9f429f')

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var/spack/repos/builtin/packages/cryptopp/package.py
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@ -14,7 +14,7 @@ class Cryptopp(MakefilePackage):
algorithms (MD5, Panama).""" algorithms (MD5, Panama)."""
homepage = "https://www.cryptopp.com" homepage = "https://www.cryptopp.com"
url = "http://www.cryptopp.com/cryptopp700.zip" url = "https://www.cryptopp.com/cryptopp700.zip"
version('7.0.0', sha256='a4bc939910edd3d29fb819a6fc0dfdc293f686fa62326f61c56d72d0a366ceb0') version('7.0.0', sha256='a4bc939910edd3d29fb819a6fc0dfdc293f686fa62326f61c56d72d0a366ceb0')
version('6.1.0', sha256='21289d2511101a9350c87c8eb1f4982d4a266e8037b19dab79a32cc13ea108c7') version('6.1.0', sha256='21289d2511101a9350c87c8eb1f4982d4a266e8037b19dab79a32cc13ea108c7')

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var/spack/repos/builtin/packages/csdp/package.py
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@ -12,7 +12,7 @@ class Csdp(MakefilePackage):
Vanderbei, and Wolkowicz""" Vanderbei, and Wolkowicz"""
homepage = "https://projects.coin-or.org/Csdp" homepage = "https://projects.coin-or.org/Csdp"
url = "http://www.coin-or.org/download/source/Csdp/Csdp-6.1.1.tgz" url = "https://www.coin-or.org/download/source/Csdp/Csdp-6.1.1.tgz"
version('6.1.1', sha256='0558a46ac534e846bf866b76a9a44e8a854d84558efa50988ffc092f99a138b9') version('6.1.1', sha256='0558a46ac534e846bf866b76a9a44e8a854d84558efa50988ffc092f99a138b9')

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var/spack/repos/builtin/packages/cube-blade/package.py
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@ -10,7 +10,7 @@ class CubeBlade(AutotoolsPackage):
"""Simple OTF2 trace explorer""" """Simple OTF2 trace explorer"""
homepage = "https://www.scalasca.org/software/cube-4.x/download.html" homepage = "https://www.scalasca.org/software/cube-4.x/download.html"
url = "http://apps.fz-juelich.de/scalasca/releases/cube/4.5/dist/blade-0.2.tar.gz" url = "https://apps.fz-juelich.de/scalasca/releases/cube/4.5/dist/blade-0.2.tar.gz"
version('0.2', sha256='ab3c5bbca79e2ec599166e75b3c96a8f6a18b3064414fc39e56f78aaae9c165c') version('0.2', sha256='ab3c5bbca79e2ec599166e75b3c96a8f6a18b3064414fc39e56f78aaae9c165c')

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var/spack/repos/builtin/packages/cube/package.py
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@ -15,7 +15,7 @@ class Cube(AutotoolsPackage):
""" """
homepage = "https://www.scalasca.org/software/cube-4.x/download.html" homepage = "https://www.scalasca.org/software/cube-4.x/download.html"
url = "http://apps.fz-juelich.de/scalasca/releases/cube/4.4/dist/cubegui-4.4.2.tar.gz" url = "https://apps.fz-juelich.de/scalasca/releases/cube/4.4/dist/cubegui-4.4.2.tar.gz"
version('4.6', sha256='1871c6736121d94a22314cb5daa8f3cbb978b58bfe54f677c4c9c9693757d0c5') version('4.6', sha256='1871c6736121d94a22314cb5daa8f3cbb978b58bfe54f677c4c9c9693757d0c5')
version('4.5', sha256='ffe84108adce0adf06dca80820d941b1a60a5580a8bacc8f7c1b6989c8ab1bfa') version('4.5', sha256='ffe84108adce0adf06dca80820d941b1a60a5580a8bacc8f7c1b6989c8ab1bfa')

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var/spack/repos/builtin/packages/cubelib/package.py
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@ -10,7 +10,7 @@ class Cubelib(AutotoolsPackage):
"""Component of CubeBundle: General purpose C++ library and tools """ """Component of CubeBundle: General purpose C++ library and tools """
homepage = "https://www.scalasca.org/software/cube-4.x/download.html" homepage = "https://www.scalasca.org/software/cube-4.x/download.html"
url = "http://apps.fz-juelich.de/scalasca/releases/cube/4.4/dist/cubelib-4.4.tar.gz" url = "https://apps.fz-juelich.de/scalasca/releases/cube/4.4/dist/cubelib-4.4.tar.gz"
version('4.6', sha256='36eaffa7688db8b9304c9e48ca5dc4edc2cb66538aaf48657b9b5ccd7979385b') version('4.6', sha256='36eaffa7688db8b9304c9e48ca5dc4edc2cb66538aaf48657b9b5ccd7979385b')
version('4.5', sha256='98f66837b4a834b1aacbcd4480a242d7a8c4a1b8dd44e02e836b8c7a4f0ffd98') version('4.5', sha256='98f66837b4a834b1aacbcd4480a242d7a8c4a1b8dd44e02e836b8c7a4f0ffd98')

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var/spack/repos/builtin/packages/cubew/package.py
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@ -10,7 +10,7 @@ class Cubew(AutotoolsPackage):
"""Component of CubeBundle: High performance C Writer library """ """Component of CubeBundle: High performance C Writer library """
homepage = "https://www.scalasca.org/software/cube-4.x/download.html" homepage = "https://www.scalasca.org/software/cube-4.x/download.html"
url = "http://apps.fz-juelich.de/scalasca/releases/cube/4.4/dist/cubew-4.4.tar.gz" url = "https://apps.fz-juelich.de/scalasca/releases/cube/4.4/dist/cubew-4.4.tar.gz"
version('4.6', sha256='99fe58ce7ab13061ebfbc360aedaecc28099a30636c5269a42c0cbaf57149aa8') version('4.6', sha256='99fe58ce7ab13061ebfbc360aedaecc28099a30636c5269a42c0cbaf57149aa8')
version('4.5', sha256='16bd8fd864197a74ca65f7325761ad75d73d555072326e95e1338cff39f28a5c') version('4.5', sha256='16bd8fd864197a74ca65f7325761ad75d73d555072326e95e1338cff39f28a5c')

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var/spack/repos/builtin/packages/cuda/package.py
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@ -84,9 +84,9 @@
'8.0.44': { '8.0.44': {
'Linux-x86_64': ('64dc4ab867261a0d690735c46d7cc9fc60d989da0d69dc04d1714e409cacbdf0', 'https://developer.nvidia.com/compute/cuda/8.0/prod/local_installers/cuda_8.0.44_linux-run')}, 'Linux-x86_64': ('64dc4ab867261a0d690735c46d7cc9fc60d989da0d69dc04d1714e409cacbdf0', 'https://developer.nvidia.com/compute/cuda/8.0/prod/local_installers/cuda_8.0.44_linux-run')},
'7.5.18': { '7.5.18': {
'Linux-x86_64': ('08411d536741075131a1858a68615b8b73c51988e616e83b835e4632eea75eec', 'http://developer.download.nvidia.com/compute/cuda/7.5/Prod/local_installers/cuda_7.5.18_linux.run')}, 'Linux-x86_64': ('08411d536741075131a1858a68615b8b73c51988e616e83b835e4632eea75eec', 'https://developer.download.nvidia.com/compute/cuda/7.5/Prod/local_installers/cuda_7.5.18_linux.run')},
'6.5.14': { '6.5.14': {
'Linux-x86_64': ('f3e527f34f317314fe8fcd8c85f10560729069298c0f73105ba89225db69da48', 'http://developer.download.nvidia.com/compute/cuda/6_5/rel/installers/cuda_6.5.14_linux_64.run')}, 'Linux-x86_64': ('f3e527f34f317314fe8fcd8c85f10560729069298c0f73105ba89225db69da48', 'https://developer.download.nvidia.com/compute/cuda/6_5/rel/installers/cuda_6.5.14_linux_64.run')},
} }

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var/spack/repos/builtin/packages/cufflinks/package.py
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@ -11,7 +11,7 @@ class Cufflinks(Package):
for differential expression and regulation in RNA-Seq samples.""" for differential expression and regulation in RNA-Seq samples."""
homepage = "https://cole-trapnell-lab.github.io/cufflinks" homepage = "https://cole-trapnell-lab.github.io/cufflinks"
url = "http://cole-trapnell-lab.github.io/cufflinks/assets/downloads/cufflinks-2.2.1.Linux_x86_64.tar.gz" url = "https://cole-trapnell-lab.github.io/cufflinks/assets/downloads/cufflinks-2.2.1.Linux_x86_64.tar.gz"
version('2.2.1', sha256='39f812452cae26462e5d2671d38104d9e8ef30aaf9ab6dea8ca57f50f46448e4') version('2.2.1', sha256='39f812452cae26462e5d2671d38104d9e8ef30aaf9ab6dea8ca57f50f46448e4')

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var/spack/repos/builtin/packages/darshan-runtime/package.py
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@ -16,7 +16,7 @@ class DarshanRuntime(AutotoolsPackage):
systems where you intend to instrument MPI applications.""" systems where you intend to instrument MPI applications."""
homepage = "https://www.mcs.anl.gov/research/projects/darshan/" homepage = "https://www.mcs.anl.gov/research/projects/darshan/"
url = "http://ftp.mcs.anl.gov/pub/darshan/releases/darshan-3.1.0.tar.gz" url = "https://ftp.mcs.anl.gov/pub/darshan/releases/darshan-3.1.0.tar.gz"
git = "https://github.com/darshan-hpc/darshan.git" git = "https://github.com/darshan-hpc/darshan.git"
maintainers = ['shanedsnyder', 'carns'] maintainers = ['shanedsnyder', 'carns']

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var/spack/repos/builtin/packages/darshan-util/package.py
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@ -13,7 +13,7 @@ class DarshanUtil(AutotoolsPackage):
log files produced by Darshan (runtime).""" log files produced by Darshan (runtime)."""
homepage = "https://www.mcs.anl.gov/research/projects/darshan/" homepage = "https://www.mcs.anl.gov/research/projects/darshan/"
url = "http://ftp.mcs.anl.gov/pub/darshan/releases/darshan-3.1.0.tar.gz" url = "https://ftp.mcs.anl.gov/pub/darshan/releases/darshan-3.1.0.tar.gz"
git = "https://github.com/darshan-hpc/darshan.git" git = "https://github.com/darshan-hpc/darshan.git"
maintainers = ['shanedsnyder', 'carns'] maintainers = ['shanedsnyder', 'carns']

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var/spack/repos/builtin/packages/dialign-tx/package.py
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@ -11,7 +11,7 @@ class DialignTx(MakefilePackage):
multiple sequence alignment""" multiple sequence alignment"""
homepage = "https://dialign-tx.gobics.de/" homepage = "https://dialign-tx.gobics.de/"
url = "http://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz" url = "https://dialign-tx.gobics.de/DIALIGN-TX_1.0.2.tar.gz"
version('1.0.2', sha256='fb3940a48a12875332752a298f619f0da62593189cd257d28932463c7cebcb8f') version('1.0.2', sha256='fb3940a48a12875332752a298f619f0da62593189cd257d28932463c7cebcb8f')

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var/spack/repos/builtin/packages/diffsplice/package.py
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@ -12,7 +12,7 @@ class Diffsplice(MakefilePackage):
transcriptome or pre-determined splice pattern.""" transcriptome or pre-determined splice pattern."""
homepage = "http://www.netlab.uky.edu/p/bioinfo/DiffSplice" homepage = "http://www.netlab.uky.edu/p/bioinfo/DiffSplice"
url = "http://protocols.netlab.uky.edu/~yin/download/diffsplice/diffsplice_0.1.1.tgz" url = "https://protocols.netlab.uky.edu/~yin/download/diffsplice/diffsplice_0.1.1.tgz"
version('0.1.2beta', sha256='cc06dcb9f8d98b2184f0dd5863b79bdd6a8cd33b9418e6549b7ea63e90ee1aa6') version('0.1.2beta', sha256='cc06dcb9f8d98b2184f0dd5863b79bdd6a8cd33b9418e6549b7ea63e90ee1aa6')
version('0.1.1', sha256='9740426692b0e5f92b943b127014c1d9815bed2938b5dd9e9d0c5b64abbb5da6') version('0.1.1', sha256='9740426692b0e5f92b943b127014c1d9815bed2938b5dd9e9d0c5b64abbb5da6')

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var/spack/repos/builtin/packages/dire/package.py
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@ -12,9 +12,9 @@ class Dire(Package):
collisions.""" collisions."""
homepage = "https://dire.gitlab.io/" homepage = "https://dire.gitlab.io/"
url = "http://dire.gitlab.io/Downloads/DIRE-2.004.tar.gz" url = "https://dire.gitlab.io/Downloads/DIRE-2.004.tar.gz"
git = "http://gitlab.com/dire/direforpythia" git = "https://gitlab.com/dire/direforpythia"
list_url = "http://dire.gitlab.io/Downloads.html" list_url = "https://dire.gitlab.io/Downloads.html"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/docbook-xml/package.py
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@ -159,11 +159,11 @@ def config_docbook(self):
'file://{0}/isotech.ent'.format(ent_dir), 'file://{0}/isotech.ent'.format(ent_dir),
docbook) docbook)
xmlcatalog('--noout', '--add', 'rewriteSystem', xmlcatalog('--noout', '--add', 'rewriteSystem',
'http://www.oasis-open.org/docbook/xml/{0}'.format(version), 'https://www.oasis-open.org/docbook/xml/{0}'.format(version),
'file://{0}'.format(prefix), 'file://{0}'.format(prefix),
docbook) docbook)
xmlcatalog('--noout', '--add', 'rewriteURI', xmlcatalog('--noout', '--add', 'rewriteURI',
'http://www.oasis-open.org/docbook/xml/{0}'.format(version), 'https://www.oasis-open.org/docbook/xml/{0}'.format(version),
'file://{0}'.format(prefix), 'file://{0}'.format(prefix),
docbook) docbook)
@ -182,11 +182,11 @@ def config_docbook(self):
'file://{0}'.format(docbook), 'file://{0}'.format(docbook),
catalog) catalog)
xmlcatalog('--noout', '--add', 'delegateSystem', xmlcatalog('--noout', '--add', 'delegateSystem',
'http://www.oasis-open.org/docbook/', 'https://www.oasis-open.org/docbook/',
'file://{0}'.format(docbook), 'file://{0}'.format(docbook),
catalog) catalog)
xmlcatalog('--noout', '--add', 'delegateURI', xmlcatalog('--noout', '--add', 'delegateURI',
'http://www.oasis-open.org/docbook/', 'https://www.oasis-open.org/docbook/',
'file://{0}'.format(docbook), 'file://{0}'.format(docbook),
catalog) catalog)

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var/spack/repos/builtin/packages/docbook-xsl/package.py
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@ -37,13 +37,13 @@ def config_docbook(self):
# create catalog # create catalog
xmlcatalog('--noout', '--create', catalog) xmlcatalog('--noout', '--create', catalog)
xmlcatalog('--noout', '--add', 'system', xmlcatalog('--noout', '--add', 'system',
'http://www.w3.org/2001/xml.xsd', xml_xsd, catalog) 'https://www.w3.org/2001/xml.xsd', xml_xsd, catalog)
xmlcatalog('--noout', '--add', 'system', xmlcatalog('--noout', '--add', 'system',
'http://www.w3.org/2009/01/xml.xsd', xml_xsd, catalog) 'https://www.w3.org/2009/01/xml.xsd', xml_xsd, catalog)
xmlcatalog('--noout', '--add', 'uri', xmlcatalog('--noout', '--add', 'uri',
'http://www.w3.org/2001/xml.xsd', xml_xsd, catalog) 'https://www.w3.org/2001/xml.xsd', xml_xsd, catalog)
xmlcatalog('--noout', '--add', 'uri', xmlcatalog('--noout', '--add', 'uri',
'http://www.w3.org/2009/01/xml.xsd', xml_xsd, catalog) 'https://www.w3.org/2009/01/xml.xsd', xml_xsd, catalog)
docbook_urls = ['docbook.sourceforge.net', 'cdn.docbook.org'] docbook_urls = ['docbook.sourceforge.net', 'cdn.docbook.org']
docbook_rewrites = ['rewriteSystem', 'rewriteURI'] docbook_rewrites = ['rewriteSystem', 'rewriteURI']

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var/spack/repos/builtin/packages/dray/package.py
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@ -127,7 +127,7 @@ def create_host_config(self, spec, prefix):
all of the options used to configure and build ascent. all of the options used to configure and build ascent.
For more details about 'host-config' files see: For more details about 'host-config' files see:
http://ascent.readthedocs.io/en/latest/BuildingAscent.html https://ascent.readthedocs.io/en/latest/BuildingAscent.html
""" """
####################### #######################

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var/spack/repos/builtin/packages/dsdp/package.py
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@ -17,7 +17,7 @@ class Dsdp(MakefilePackage):
certificates of infeasibility when no feasible solution exists.""" certificates of infeasibility when no feasible solution exists."""
homepage = "https://www.mcs.anl.gov/hs/software/DSDP/" homepage = "https://www.mcs.anl.gov/hs/software/DSDP/"
url = "http://www.mcs.anl.gov/hs/software/DSDP/DSDP5.8.tar.gz" url = "https://www.mcs.anl.gov/hs/software/DSDP/DSDP5.8.tar.gz"
version('5.8', sha256='26aa624525a636de272c0b329e2dfd01a0d5b7827f1c1c76f393d71e37dead70') version('5.8', sha256='26aa624525a636de272c0b329e2dfd01a0d5b7827f1c1c76f393d71e37dead70')

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var/spack/repos/builtin/packages/elsi/package.py
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@ -14,7 +14,7 @@ class Elsi(CMakePackage):
codes to a variety of eigenvalue solvers.""" codes to a variety of eigenvalue solvers."""
homepage = "https://wordpress.elsi-interchange.org/" homepage = "https://wordpress.elsi-interchange.org/"
url = "http://wordpress.elsi-interchange.org/wp-content/uploads/2019/03/elsi-2.2.1.tar.gz" url = "https://wordpress.elsi-interchange.org/wp-content/uploads/2019/03/elsi-2.2.1.tar.gz"
version('2.2.1', sha256='5b4b2e8fa4b3b68131fe02cc1803a884039b89a1b1138af474af66453bec0b4d') version('2.2.1', sha256='5b4b2e8fa4b3b68131fe02cc1803a884039b89a1b1138af474af66453bec0b4d')

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var/spack/repos/builtin/packages/eospac/package.py
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@ -13,7 +13,7 @@ class Eospac(Package):
""" """
homepage = "https://laws.lanl.gov/projects/data/eos.html" homepage = "https://laws.lanl.gov/projects/data/eos.html"
list_url = "http://laws.lanl.gov/projects/data/eos/eospacReleases.php" list_url = "https://laws.lanl.gov/projects/data/eos/eospacReleases.php"
maintainers = ['KineticTheory'] maintainers = ['KineticTheory']
# An EOSPAC release labeled "beta" doesn't always imply that the # An EOSPAC release labeled "beta" doesn't always imply that the

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var/spack/repos/builtin/packages/exmcutils/package.py
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@ -11,7 +11,7 @@ class Exmcutils(AutotoolsPackage):
"""ExM C-Utils: Generic C utility library for ADLB/X and Swift/T""" """ExM C-Utils: Generic C utility library for ADLB/X and Swift/T"""
homepage = 'http://swift-lang.org/Swift-T' homepage = 'http://swift-lang.org/Swift-T'
url = 'http://swift-lang.github.io/swift-t-downloads/spack/exmcutils-0.6.0.tar.gz' url = 'https://swift-lang.github.io/swift-t-downloads/spack/exmcutils-0.6.0.tar.gz'
git = "https://github.com/swift-lang/swift-t.git" git = "https://github.com/swift-lang/swift-t.git"
version('master', branch='master') version('master', branch='master')

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var/spack/repos/builtin/packages/exonerate/package.py
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@ -10,7 +10,7 @@ class Exonerate(AutotoolsPackage):
"""Pairwise sequence alignment of DNA and proteins""" """Pairwise sequence alignment of DNA and proteins"""
homepage = "https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate" homepage = "https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate"
url = "http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.4.0.tar.gz" url = "https://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.4.0.tar.gz"
version('2.4.0', sha256='f849261dc7c97ef1f15f222e955b0d3daf994ec13c9db7766f1ac7e77baa4042') version('2.4.0', sha256='f849261dc7c97ef1f15f222e955b0d3daf994ec13c9db7766f1ac7e77baa4042')

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var/spack/repos/builtin/packages/f2c/package.py
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@ -15,7 +15,7 @@ class F2c(MakefilePackage):
version('master', sha256='d4847456aa91c74e5e61e2097780ca6ac3b20869fae8864bfa8dcc66f6721d35') version('master', sha256='d4847456aa91c74e5e61e2097780ca6ac3b20869fae8864bfa8dcc66f6721d35')
def url_for_version(self, version): def url_for_version(self, version):
url = "http://www.netlib.org/f2c/src.tgz" url = "https://www.netlib.org/f2c/src.tgz"
return url return url
def edit(self, spec, prefix): def edit(self, spec, prefix):

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var/spack/repos/builtin/packages/ffmpeg/package.py
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@ -11,7 +11,7 @@ class Ffmpeg(AutotoolsPackage):
convert and stream audio and video.""" convert and stream audio and video."""
homepage = "https://ffmpeg.org" homepage = "https://ffmpeg.org"
url = "http://ffmpeg.org/releases/ffmpeg-4.1.1.tar.bz2" url = "https://ffmpeg.org/releases/ffmpeg-4.1.1.tar.bz2"
maintainers = ['xjrc'] maintainers = ['xjrc']

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var/spack/repos/builtin/packages/fftw/package.py
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@ -208,8 +208,8 @@ class Fftw(FftwBase):
library of choice for most applications.""" library of choice for most applications."""
homepage = "https://www.fftw.org" homepage = "https://www.fftw.org"
url = "http://www.fftw.org/fftw-3.3.4.tar.gz" url = "https://www.fftw.org/fftw-3.3.4.tar.gz"
list_url = "http://www.fftw.org/download.html" list_url = "https://www.fftw.org/download.html"
version('3.3.9', sha256='bf2c7ce40b04ae811af714deb512510cc2c17b9ab9d6ddcf49fe4487eea7af3d') version('3.3.9', sha256='bf2c7ce40b04ae811af714deb512510cc2c17b9ab9d6ddcf49fe4487eea7af3d')
version('3.3.8', sha256='6113262f6e92c5bd474f2875fa1b01054c4ad5040f6b0da7c03c98821d9ae303') version('3.3.8', sha256='6113262f6e92c5bd474f2875fa1b01054c4ad5040f6b0da7c03c98821d9ae303')

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var/spack/repos/builtin/packages/fjcontrib/package.py
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@ -12,7 +12,7 @@ class Fjcontrib(AutotoolsPackage):
"""3rd party extensions of FastJet""" """3rd party extensions of FastJet"""
homepage = "https://fastjet.hepforge.org/contrib/" homepage = "https://fastjet.hepforge.org/contrib/"
url = "http://fastjet.hepforge.org/contrib/downloads/fjcontrib-1.044.tar.gz" url = "https://fastjet.hepforge.org/contrib/downloads/fjcontrib-1.044.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/flink/package.py
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@ -13,7 +13,7 @@ class Flink(Package):
""" """
homepage = "https://flink.apache.org/" homepage = "https://flink.apache.org/"
url = "http://archive.apache.org/dist/flink/flink-1.9.1/flink-1.9.1-bin-scala_2.11.tgz" url = "https://archive.apache.org/dist/flink/flink-1.9.1/flink-1.9.1-bin-scala_2.11.tgz"
version('1.9.1', sha256='f69de344cd593e92f8261e19ae8a47b3910e9a70a7cd1ccfb1ecd1ff000b93ea') version('1.9.1', sha256='f69de344cd593e92f8261e19ae8a47b3910e9a70a7cd1ccfb1ecd1ff000b93ea')
version('1.9.0', sha256='a2245f68309e94ed54d86a680232a518aed9c5ea030bcc0b298bc8f27165eeb7') version('1.9.0', sha256='a2245f68309e94ed54d86a680232a518aed9c5ea030bcc0b298bc8f27165eeb7')

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var/spack/repos/builtin/packages/flint/package.py
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@ -10,7 +10,7 @@ class Flint(Package):
"""FLINT (Fast Library for Number Theory).""" """FLINT (Fast Library for Number Theory)."""
homepage = "https://www.flintlib.org" homepage = "https://www.flintlib.org"
url = "http://mirrors.mit.edu/sage/spkg/upstream/flint/flint-2.5.2.tar.gz" url = "https://mirrors.mit.edu/sage/spkg/upstream/flint/flint-2.5.2.tar.gz"
git = "https://github.com/wbhart/flint2.git" git = "https://github.com/wbhart/flint2.git"
version('develop', branch='trunk') version('develop', branch='trunk')

2
var/spack/repos/builtin/packages/fontconfig/package.py
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@ -9,7 +9,7 @@
class Fontconfig(AutotoolsPackage): class Fontconfig(AutotoolsPackage):
"""Fontconfig is a library for configuring/customizing font access""" """Fontconfig is a library for configuring/customizing font access"""
homepage = "https://www.freedesktop.org/wiki/Software/fontconfig/" homepage = "https://www.freedesktop.org/wiki/Software/fontconfig/"
url = "http://www.freedesktop.org/software/fontconfig/release/fontconfig-2.12.3.tar.gz" url = "https://www.freedesktop.org/software/fontconfig/release/fontconfig-2.12.3.tar.gz"
version('2.13.93', sha256='0f302a18ee52dde0793fe38b266bf269dfe6e0c0ae140e30d72c6cca5dc08db5') version('2.13.93', sha256='0f302a18ee52dde0793fe38b266bf269dfe6e0c0ae140e30d72c6cca5dc08db5')
version('2.13.1', sha256='9f0d852b39d75fc655f9f53850eb32555394f36104a044bb2b2fc9e66dbbfa7f') version('2.13.1', sha256='9f0d852b39d75fc655f9f53850eb32555394f36104a044bb2b2fc9e66dbbfa7f')

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var/spack/repos/builtin/packages/fqtrim/package.py
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@ -13,7 +13,7 @@ class Fqtrim(MakefilePackage):
machines.""" machines."""
homepage = "https://ccb.jhu.edu/software/fqtrim/" homepage = "https://ccb.jhu.edu/software/fqtrim/"
url = "http://ccb.jhu.edu/software/fqtrim/dl/fqtrim-0.9.7.tar.gz" url = "https://ccb.jhu.edu/software/fqtrim/dl/fqtrim-0.9.7.tar.gz"
version('0.9.7', sha256='4951538f69dde14a23fc4841ff020434d26eb9622c4e06b43c068c702aa3d0d6') version('0.9.7', sha256='4951538f69dde14a23fc4841ff020434d26eb9622c4e06b43c068c702aa3d0d6')

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var/spack/repos/builtin/packages/fsl/package.py
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@ -16,7 +16,7 @@ class Fsl(Package, CudaPackage):
# NOTE: A manual download is required for FSL. Spack will search your # NOTE: A manual download is required for FSL. Spack will search your
# current directory for the download file. Alternatively, add this file to # current directory for the download file. Alternatively, add this file to
# a mirror so that Spack can find it. For instructions on how to set up a # a mirror so that Spack can find it. For instructions on how to set up a
# mirror, see http://spack.readthedocs.io/en/latest/mirrors.html # mirror, see https://spack.readthedocs.io/en/latest/mirrors.html
homepage = "https://fsl.fmrib.ox.ac.uk" homepage = "https://fsl.fmrib.ox.ac.uk"
url = "file://{0}/fsl-5.0.10-sources.tar.gz".format(os.getcwd()) url = "file://{0}/fsl-5.0.10-sources.tar.gz".format(os.getcwd())

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var/spack/repos/builtin/packages/g4abla/package.py
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@ -10,7 +10,7 @@
class G4abla(Package): class G4abla(Package):
"""Geant4 data for nuclear shell effects in INCL/ABLA hadronic mode""" """Geant4 data for nuclear shell effects in INCL/ABLA hadronic mode"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4ABLA.3.0.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4ABLA.3.0.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4emlow/package.py
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@ -10,7 +10,7 @@
class G4emlow(Package): class G4emlow(Package):
"""Geant4 data files for low energy electromagnetic processes.""" """Geant4 data files for low energy electromagnetic processes."""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4EMLOW.6.50.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4EMLOW.6.50.tar.gz"
tags = ['hep'] tags = ['hep']
@ -37,4 +37,4 @@ def setup_dependent_run_environment(self, env, dependent_spec):
def url_for_version(self, version): def url_for_version(self, version):
"""Handle version string.""" """Handle version string."""
return ("http://geant4-data.web.cern.ch/geant4-data/datasets/G4EMLOW.%s.tar.gz" % version) return ("https://geant4-data.web.cern.ch/geant4-data/datasets/G4EMLOW.%s.tar.gz" % version)

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var/spack/repos/builtin/packages/g4ensdfstate/package.py
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@ -10,7 +10,7 @@
class G4ensdfstate(Package): class G4ensdfstate(Package):
"""Geant4 data for nuclides properties""" """Geant4 data for nuclides properties"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4ENSDFSTATE.2.1.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4ENSDFSTATE.2.1.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4incl/package.py
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@ -11,7 +11,7 @@ class G4incl(Package):
"""Geant4 data for evaluated particle cross-sections on natural """Geant4 data for evaluated particle cross-sections on natural
composition of elements""" composition of elements"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4INCL.1.0.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4INCL.1.0.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4ndl/package.py
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@ -10,7 +10,7 @@
class G4ndl(Package): class G4ndl(Package):
"""Geant4 Neutron data files with thermal cross sections """ """Geant4 Neutron data files with thermal cross sections """
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4NDL.4.5.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4NDL.4.5.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4neutronxs/package.py
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@ -11,7 +11,7 @@ class G4neutronxs(Package):
"""Geant4 data for evaluated neutron cross-sections on natural composition """Geant4 data for evaluated neutron cross-sections on natural composition
of elements""" of elements"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4NEUTRONXS.1.4.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4NEUTRONXS.1.4.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4particlexs/package.py
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@ -11,7 +11,7 @@ class G4particlexs(Package):
"""Geant4 data for evaluated particle cross-sections on """Geant4 data for evaluated particle cross-sections on
natural composition of elements""" natural composition of elements"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4PARTICLEXS.2.1.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4PARTICLEXS.2.1.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4photonevaporation/package.py
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@ -10,7 +10,7 @@
class G4photonevaporation(Package): class G4photonevaporation(Package):
"""Geant4 data for photon evaporation""" """Geant4 data for photon evaporation"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4PhotonEvaporation.4.3.2.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4PhotonEvaporation.4.3.2.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4pii/package.py
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@ -10,7 +10,7 @@
class G4pii(Package): class G4pii(Package):
"""Geant4 data for shell ionisation cross-sections""" """Geant4 data for shell ionisation cross-sections"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4PII.1.3.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4PII.1.3.tar.gz"
tags = ['hep'] tags = ['hep']
@ -32,4 +32,4 @@ def setup_dependent_run_environment(self, env, dependent_spec):
def url_for_version(self, version): def url_for_version(self, version):
"""Handle version string.""" """Handle version string."""
return ("http://geant4-data.web.cern.ch/geant4-data/datasets/G4PII.1.3.tar.gz" % version) return ("https://geant4-data.web.cern.ch/geant4-data/datasets/G4PII.1.3.tar.gz" % version)

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var/spack/repos/builtin/packages/g4radioactivedecay/package.py
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@ -10,7 +10,7 @@
class G4radioactivedecay(Package): class G4radioactivedecay(Package):
"""Geant4 data files for radio-active decay hadronic processes""" """Geant4 data files for radio-active decay hadronic processes"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4RadioactiveDecay.5.1.1.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4RadioactiveDecay.5.1.1.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4realsurface/package.py
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@ -10,7 +10,7 @@
class G4realsurface(Package): class G4realsurface(Package):
"""Geant4 data for measured optical surface reflectance""" """Geant4 data for measured optical surface reflectance"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/RealSurface.1.0.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/RealSurface.1.0.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4saiddata/package.py
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@ -10,7 +10,7 @@
class G4saiddata(Package): class G4saiddata(Package):
"""Geant4 data from evaluated cross-sections in SAID data-base """ """Geant4 data from evaluated cross-sections in SAID data-base """
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4SAIDDATA.1.1.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4SAIDDATA.1.1.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/g4tendl/package.py
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@ -10,7 +10,7 @@
class G4tendl(Package): class G4tendl(Package):
"""Geant4 data for incident particles [optional]""" """Geant4 data for incident particles [optional]"""
homepage = "https://geant4.web.cern.ch" homepage = "https://geant4.web.cern.ch"
url = "http://geant4-data.web.cern.ch/geant4-data/datasets/G4TENDL.1.3.tar.gz" url = "https://geant4-data.web.cern.ch/geant4-data/datasets/G4TENDL.1.3.tar.gz"
tags = ['hep'] tags = ['hep']

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var/spack/repos/builtin/packages/ganglia/package.py
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@ -13,7 +13,7 @@ class Ganglia(AutotoolsPackage):
nodes in size.""" nodes in size."""
homepage = "http://ganglia.sourceforge.net/" homepage = "http://ganglia.sourceforge.net/"
url = "http://jaist.dl.sourceforge.net/project/ganglia/ganglia%20monitoring%20core/3.7.2/ganglia-3.7.2.tar.gz" url = "https://jaist.dl.sourceforge.net/project/ganglia/ganglia%20monitoring%20core/3.7.2/ganglia-3.7.2.tar.gz"
list_url = "http://jaist.dl.sourceforge.net/project/ganglia/ganglia%20monitoring%20core" list_url = "http://jaist.dl.sourceforge.net/project/ganglia/ganglia%20monitoring%20core"
list_depth = 1 list_depth = 1

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var/spack/repos/builtin/packages/gapfiller/package.py
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@ -17,7 +17,7 @@ class Gapfiller(Package):
Spack will search your current directory for the download file. Spack will search your current directory for the download file.
Alternatively, add this file to a mirror so that Spack can find it. Alternatively, add this file to a mirror so that Spack can find it.
For instructions on how to set up a mirror, see For instructions on how to set up a mirror, see
http://spack.readthedocs.io/en/latest/mirrors.html""" https://spack.readthedocs.io/en/latest/mirrors.html"""
homepage = "https://www.baseclear.com/genomics/bioinformatics/basetools/gapfiller" homepage = "https://www.baseclear.com/genomics/bioinformatics/basetools/gapfiller"
manual_download = True manual_download = True

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var/spack/repos/builtin/packages/gcc/package.py
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@ -22,7 +22,7 @@ class Gcc(AutotoolsPackage, GNUMirrorPackage):
homepage = 'https://gcc.gnu.org' homepage = 'https://gcc.gnu.org'
gnu_mirror_path = 'gcc/gcc-9.2.0/gcc-9.2.0.tar.xz' gnu_mirror_path = 'gcc/gcc-9.2.0/gcc-9.2.0.tar.xz'
git = 'git://gcc.gnu.org/git/gcc.git' git = 'git://gcc.gnu.org/git/gcc.git'
list_url = 'http://ftp.gnu.org/gnu/gcc/' list_url = 'https://ftp.gnu.org/gnu/gcc/'
list_depth = 1 list_depth = 1
maintainers = ['michaelkuhn', 'alalazo'] maintainers = ['michaelkuhn', 'alalazo']

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var/spack/repos/builtin/packages/genemark-et/package.py
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@ -16,7 +16,7 @@ class GenemarkEt(Package):
Spack will search your current directory for the download file. Spack will search your current directory for the download file.
Alternatively, add this file to a mirror so that Spack can find it. Alternatively, add this file to a mirror so that Spack can find it.
For instructions on how to set up a mirror, see For instructions on how to set up a mirror, see
http://spack.readthedocs.io/en/latest/mirrors.html""" https://spack.readthedocs.io/en/latest/mirrors.html"""
homepage = "http://topaz.gatech.edu/GeneMark" homepage = "http://topaz.gatech.edu/GeneMark"
manual_download = True manual_download = True

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var/spack/repos/builtin/packages/ghostscript/package.py
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@ -63,7 +63,7 @@ def patch(self):
we have to remove these vendored dependencies. we have to remove these vendored dependencies.
Note that this approach is also recommended by Linux from Scratch: Note that this approach is also recommended by Linux from Scratch:
http://www.linuxfromscratch.org/blfs/view/svn/pst/gs.html https://www.linuxfromscratch.org/blfs/view/svn/pst/gs.html
""" """
directories = ['freetype', 'jpeg', 'libpng', 'zlib'] directories = ['freetype', 'jpeg', 'libpng', 'zlib']
if self.spec.satisfies('@:9.21'): if self.spec.satisfies('@:9.21'):

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var/spack/repos/builtin/packages/gl2ps/package.py
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@ -11,7 +11,7 @@ class Gl2ps(CMakePackage):
OpenGL application.""" OpenGL application."""
homepage = "https://www.geuz.org/gl2ps/" homepage = "https://www.geuz.org/gl2ps/"
url = "http://geuz.org/gl2ps/src/gl2ps-1.3.9.tgz" url = "https://geuz.org/gl2ps/src/gl2ps-1.3.9.tgz"
version('1.4.0', sha256='03cb5e6dfcd87183f3b9ba3b22f04cd155096af81e52988cc37d8d8efe6cf1e2') version('1.4.0', sha256='03cb5e6dfcd87183f3b9ba3b22f04cd155096af81e52988cc37d8d8efe6cf1e2')
version('1.3.9', sha256='8a680bff120df8bcd78afac276cdc38041fed617f2721bade01213362bcc3640') version('1.3.9', sha256='8a680bff120df8bcd78afac276cdc38041fed617f2721bade01213362bcc3640')

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var/spack/repos/builtin/packages/glvis/package.py
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@ -24,7 +24,7 @@ class Glvis(MakefilePackage):
# 1. Verify that no checksums on old versions have changed. # 1. Verify that no checksums on old versions have changed.
# #
# 2. Verify that the shortened URL for the new version is listed at: # 2. Verify that the shortened URL for the new version is listed at:
# http://glvis.org/download/ # https://glvis.org/download/
# #
# 3. Use http://getlinkinfo.com or similar to verify that the # 3. Use http://getlinkinfo.com or similar to verify that the
# underling download link for the latest version comes has the # underling download link for the latest version comes has the

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var/spack/repos/builtin/packages/graphviz/package.py
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@ -62,7 +62,7 @@ class Graphviz(AutotoolsPackage):
variant('x', default=False, variant('x', default=False,
description='Use the X Window System') description='Use the X Window System')
patch('http://www.linuxfromscratch.org/patches/blfs/9.0/graphviz-2.40.1-qt5-1.patch', patch('https://www.linuxfromscratch.org/patches/blfs/9.0/graphviz-2.40.1-qt5-1.patch',
sha256='bd532df325df811713e311d17aaeac3f5d6075ea4fd0eae8d989391e6afba930', sha256='bd532df325df811713e311d17aaeac3f5d6075ea4fd0eae8d989391e6afba930',
when='@:2.40+qt^qt@5:') when='@:2.40+qt^qt@5:')
patch('https://raw.githubusercontent.com/easybuilders/easybuild-easyconfigs/master/easybuild/easyconfigs/g/Graphviz/Graphviz-2.38.0_icc_sfio.patch', patch('https://raw.githubusercontent.com/easybuilders/easybuild-easyconfigs/master/easybuild/easyconfigs/g/Graphviz/Graphviz-2.38.0_icc_sfio.patch',

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var/spack/repos/builtin/packages/grass/package.py
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@ -58,7 +58,7 @@ class Grass(AutotoolsPackage):
variant('geos', default=False, description='Enable GEOS support') variant('geos', default=False, description='Enable GEOS support')
variant('x', default=False, description='Use the X Window System') variant('x', default=False, description='Use the X Window System')
# http://htmlpreview.github.io/?https://github.com/OSGeo/grass/blob/master/REQUIREMENTS.html # https://htmlpreview.github.io/?https://github.com/OSGeo/grass/blob/master/REQUIREMENTS.html
# General requirements # General requirements
depends_on('gmake@3.81:', type='build') depends_on('gmake@3.81:', type='build')
depends_on('iconv') depends_on('iconv')

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var/spack/repos/builtin/packages/gromacs/package.py
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@ -20,7 +20,7 @@ class Gromacs(CMakePackage):
""" """
homepage = 'http://www.gromacs.org' homepage = 'http://www.gromacs.org'
url = 'http://ftp.gromacs.org/gromacs/gromacs-5.1.2.tar.gz' url = 'https://ftp.gromacs.org/gromacs/gromacs-5.1.2.tar.gz'
git = 'https://github.com/gromacs/gromacs.git' git = 'https://github.com/gromacs/gromacs.git'
maintainers = ['junghans', 'marvinbernhardt'] maintainers = ['junghans', 'marvinbernhardt']

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var/spack/repos/builtin/packages/gtkorvo-enet/package.py
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@ -10,7 +10,7 @@ class GtkorvoEnet(AutotoolsPackage):
"""ENet reliable UDP networking library. """ENet reliable UDP networking library.
This is a downstream branch of lsalzman's ENet. This is a downstream branch of lsalzman's ENet.
This version has expanded the client ID to handle more clients. This version has expanded the client ID to handle more clients.
The original is at http://github.com/lsalzman/enet. The original is at https://github.com/lsalzman/enet.
""" """
homepage = "https://www.github.com/GTkorvo/enet" homepage = "https://www.github.com/GTkorvo/enet"

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var/spack/repos/builtin/packages/gurobi/package.py
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@ -18,7 +18,7 @@ class Gurobi(Package):
# search your current directory for the download file. Alternatively, add # search your current directory for the download file. Alternatively, add
# this file to a mirror so that Spack can find it. For instructions on how # this file to a mirror so that Spack can find it. For instructions on how
# to set up a mirror, see # to set up a mirror, see
# http://spack.readthedocs.io/en/latest/mirrors.html # https://spack.readthedocs.io/en/latest/mirrors.html
homepage = "https://www.gurobi.com/index" homepage = "https://www.gurobi.com/index"
manual_download = True manual_download = True

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var/spack/repos/builtin/packages/h5hut/package.py
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@ -12,7 +12,7 @@ class H5hut(AutotoolsPackage):
High-Performance I/O Library for Particle-based Simulations.""" High-Performance I/O Library for Particle-based Simulations."""
homepage = "https://amas.psi.ch/H5hut/" homepage = "https://amas.psi.ch/H5hut/"
url = "http://amas.web.psi.ch/Downloads/H5hut/H5hut-2.0.0rc3.tar.gz" url = "https://amas.web.psi.ch/Downloads/H5hut/H5hut-2.0.0rc3.tar.gz"
version('2.0.0rc3', sha256='1ca9a9478a99e1811ecbca3c02cc49258050d339ffb1a170006eab4ab2a01790') version('2.0.0rc3', sha256='1ca9a9478a99e1811ecbca3c02cc49258050d339ffb1a170006eab4ab2a01790')

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var/spack/repos/builtin/packages/harfbuzz/package.py
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@ -9,7 +9,7 @@
class Harfbuzz(AutotoolsPackage): class Harfbuzz(AutotoolsPackage):
"""The Harfbuzz package contains an OpenType text shaping engine.""" """The Harfbuzz package contains an OpenType text shaping engine."""
homepage = "https://github.com/harfbuzz/harfbuzz" homepage = "https://github.com/harfbuzz/harfbuzz"
url = "http://www.freedesktop.org/software/harfbuzz/release/harfbuzz-0.9.37.tar.bz2" url = "https://www.freedesktop.org/software/harfbuzz/release/harfbuzz-0.9.37.tar.bz2"
git = "https://github.com/harfbuzz/harfbuzz.git" git = "https://github.com/harfbuzz/harfbuzz.git"
version('2.6.8', sha256='6648a571a27f186e47094121f0095e1b809e918b3037c630c7f38ffad86e3035') version('2.6.8', sha256='6648a571a27f186e47094121f0095e1b809e918b3037c630c7f38ffad86e3035')

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var/spack/repos/builtin/packages/hicolor-icon-theme/package.py
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@ -9,7 +9,7 @@ class HicolorIconTheme(AutotoolsPackage):
icon theme called hicolor.""" icon theme called hicolor."""
homepage = "https://www.freedesktop.org/wiki/Software/icon-theme/" homepage = "https://www.freedesktop.org/wiki/Software/icon-theme/"
url = "http://icon-theme.freedesktop.org/releases/hicolor-icon-theme-0.17.tar.xz" url = "https://icon-theme.freedesktop.org/releases/hicolor-icon-theme-0.17.tar.xz"
version('0.17', sha256='317484352271d18cbbcfac3868eab798d67fff1b8402e740baa6ff41d588a9d8') version('0.17', sha256='317484352271d18cbbcfac3868eab798d67fff1b8402e740baa6ff41d588a9d8')

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var/spack/repos/builtin/packages/hpcc/package.py
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@ -34,7 +34,7 @@ class Hpcc(MakefilePackage):
patterns; based on b_eff (effective bandwidth benchmark).""" patterns; based on b_eff (effective bandwidth benchmark)."""
homepage = "https://icl.cs.utk.edu/hpcc" homepage = "https://icl.cs.utk.edu/hpcc"
url = "http://icl.cs.utk.edu/projectsfiles/hpcc/download/hpcc-1.5.0.tar.gz" url = "https://icl.cs.utk.edu/projectsfiles/hpcc/download/hpcc-1.5.0.tar.gz"
git = "https://github.com/icl-utk-edu/hpcc.git" git = "https://github.com/icl-utk-edu/hpcc.git"
version('develop', branch='main') version('develop', branch='main')

2
var/spack/repos/builtin/packages/hpccg/package.py
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@ -13,7 +13,7 @@ class Hpccg(MakefilePackage):
""" """
homepage = "https://mantevo.org/about/applications/" homepage = "https://mantevo.org/about/applications/"
url = "http://downloads.mantevo.org/releaseTarballs/miniapps/HPCCG/HPCCG-1.0.tar.gz" url = "https://downloads.mantevo.org/releaseTarballs/miniapps/HPCCG/HPCCG-1.0.tar.gz"
tags = ['proxy-app'] tags = ['proxy-app']

2
var/spack/repos/builtin/packages/hpcg/package.py
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@ -15,7 +15,7 @@ class Hpcg(AutotoolsPackage):
(PCG) iterations using double precision (64 bit) floating point values.""" (PCG) iterations using double precision (64 bit) floating point values."""
homepage = "https://www.hpcg-benchmark.org" homepage = "https://www.hpcg-benchmark.org"
url = "http://www.hpcg-benchmark.org/downloads/hpcg-3.1.tar.gz" url = "https://www.hpcg-benchmark.org/downloads/hpcg-3.1.tar.gz"
git = "https://github.com/hpcg-benchmark/hpcg.git" git = "https://github.com/hpcg-benchmark/hpcg.git"
version('develop', branch='master') version('develop', branch='master')

2
var/spack/repos/builtin/packages/hpl/package.py
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@ -16,7 +16,7 @@ class Hpl(AutotoolsPackage):
implementation of the High Performance Computing Linpack Benchmark.""" implementation of the High Performance Computing Linpack Benchmark."""
homepage = "https://www.netlib.org/benchmark/hpl/" homepage = "https://www.netlib.org/benchmark/hpl/"
url = "http://www.netlib.org/benchmark/hpl/hpl-2.2.tar.gz" url = "https://www.netlib.org/benchmark/hpl/hpl-2.2.tar.gz"
# Note: HPL uses autotools starting with 2.3 # Note: HPL uses autotools starting with 2.3

2
var/spack/repos/builtin/packages/httpd/package.py
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@ -11,7 +11,7 @@ class Httpd(AutotoolsPackage):
web server.""" web server."""
homepage = "https://httpd.apache.org/" homepage = "https://httpd.apache.org/"
url = "http://archive.apache.org/dist/httpd/httpd-2.4.43.tar.bz2" url = "https://archive.apache.org/dist/httpd/httpd-2.4.43.tar.bz2"
version('2.4.43', sha256='a497652ab3fc81318cdc2a203090a999150d86461acff97c1065dc910fe10f43') version('2.4.43', sha256='a497652ab3fc81318cdc2a203090a999150d86461acff97c1065dc910fe10f43')
version('2.4.41', sha256='133d48298fe5315ae9366a0ec66282fa4040efa5d566174481077ade7d18ea40') version('2.4.41', sha256='133d48298fe5315ae9366a0ec66282fa4040efa5d566174481077ade7d18ea40')

4
var/spack/repos/builtin/packages/hydra/package.py
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@ -13,8 +13,8 @@ class Hydra(AutotoolsPackage):
management systems (such as slurm, pbs, sge).""" management systems (such as slurm, pbs, sge)."""
homepage = "https://www.mpich.org" homepage = "https://www.mpich.org"
url = "http://www.mpich.org/static/downloads/3.2/hydra-3.2.tar.gz" url = "https://www.mpich.org/static/downloads/3.2/hydra-3.2.tar.gz"
list_url = "http://www.mpich.org/static/downloads/" list_url = "https://www.mpich.org/static/downloads/"
list_depth = 1 list_depth = 1
version('3.2', sha256='f7a67ec91a773d95cbbd479a80e926d44bee1ff9fc70a8d1df075ea53ea33889') version('3.2', sha256='f7a67ec91a773d95cbbd479a80e926d44bee1ff9fc70a8d1df075ea53ea33889')

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