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Package/mirdeep/fix for new url take2 (#8247)

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* rename: mirdeep -> mirdeep2

* fixes for new url
This commit is contained in:
Sinan
2018-05-23 05:25:42 -07:00
committed by Adam J. Stewart
parent 3712ac1f66
commit bc73e85af8
1 changed files with 4 additions and 4 deletions
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8
var/spack/repos/builtin/packages/mirdeep/package.py → var/spack/repos/builtin/packages/mirdeep2/package.py
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@@ -26,14 +26,14 @@
import glob
class Mirdeep(Package):
class Mirdeep2(Package):
"""miRDeep2 is a completely overhauled tool which discovers microRNA genes
by analyzing sequenced RNAs."""
homepage = "https://www.mdc-berlin.de/8551903/en/"
url = "https://www.mdc-berlin.de/45995549/en/research/research_teams/systems_biology_of_gene_regulatory_elements/projects/miRDeep/mirdeep2_0_0_8.zip"
url = "https://www.mdc-berlin.de/system/files/migrated_files/fiona/mirdeep2_0_0_8.zip"
version('2.0.0.8', 'a707f7d7ad4a2975fb8b2e78c5bcf483')
version('0.0.8', 'a707f7d7ad4a2975fb8b2e78c5bcf483')
depends_on('perl', type=('build', 'run'))
depends_on('perl-pdf-api2', type=('build', 'run'))
@@ -43,7 +43,7 @@ class Mirdeep(Package):
depends_on('randfold')
def url_for_version(self, version):
url = 'https://www.mdc-berlin.de/45995549/en/research/research_teams/systems_biology_of_gene_regulatory_elements/projects/miRDeep/mirdeep{0}.zip'
url = 'https://www.mdc-berlin.de/system/files/migrated_files/fiona/mirdeep2_{0}.zip'
return url.format(version.underscored)
def patch(self):