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petsc: update config option logic for locating dependencies (#25074)

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Primarily use --with-package-include, --with-package-lib options
(vs. --with-package-dir)
This commit is contained in:
Satish Balay 2021-07-28 16:09:54 -05:00 committed by GitHub
parent 7ea94d1103
commit c114cf019d
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GPG Key ID: 4AEE18F83AFDEB23
1 changed files with 48 additions and 93 deletions
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135
var/spack/repos/builtin/packages/petsc/package.py
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@ -366,70 +366,83 @@ def install(self, spec, prefix):
else:
options.append('--with-clanguage=C')
# PETSc depends on scalapack when '+mumps' (see depends())
# help PETSc pick up Scalapack from MKL
if spec.satisfies('+mumps'):
scalapack = spec['scalapack'].libs
options.extend([
'--with-scalapack-lib=%s' % scalapack.joined(),
'--with-scalapack=1'
])
else:
options.extend([
'--with-scalapack=0'
])
# Activates library support if needed (i.e. direct dependency)
if '^libjpeg-turbo' in spec:
jpeg_library = ('libjpeg-turbo', 'libjpeg')
else:
jpeg_library = 'libjpeg'
jpeg_sp = spec['jpeg'].name if 'jpeg' in spec else 'jpeg'
scalapack_sp = spec['scalapack'].name if 'scalapack' in spec else 'scalapack'
# tuple format (spacklibname, petsclibname, useinc, uselib)
# default: 'gmp', => ('gmp', 'gmp', True, True)
# any other combination needs a full tuple
# if not (useinc || uselib): usedir - i.e (False, False)
for library in (
'cuda',
'hip',
('cuda', 'cuda', False, False),
('hip', 'hip', False, False),
'metis',
'hypre',
'parmetis',
('superlu-dist', 'superlu_dist', True, True),
('scotch', 'ptscotch', True, True),
('suite-sparse:umfpack,klu,cholmod,btf,ccolamd,colamd,camd,amd, \
suitesparseconfig', 'suitesparse', True, True),
('hdf5:hl,fortran', 'hdf5', True, True),
'zlib',
'mumps',
'trilinos',
'fftw',
'valgrind',
('fftw:mpi', 'fftw', True, True),
('valgrind', 'valgrind', False, False),
'gmp',
'libpng',
'giflib',
('giflib', 'giflib', False, False),
'mpfr',
('netcdf-c', 'netcdf'),
('parallel-netcdf', 'pnetcdf'),
'moab',
('netcdf-c', 'netcdf', True, True),
('parallel-netcdf', 'pnetcdf', True, True),
('moab', 'moab', False, False),
'openmp',
'random123',
('random123', 'random123', False, False),
'exodusii',
'cgns',
'memkind',
'p4est',
'saws',
('libyaml', 'yaml'),
('saws', 'saws', False, False),
('libyaml', 'yaml', True, True),
'hwloc',
jpeg_library,
(jpeg_sp, 'libjpeg', True, True),
(scalapack_sp, 'scalapack', False, True),
):
# Cannot check `library in spec` because of transitive deps
# Cannot check variants because parmetis keys on +metis
if isinstance(library, tuple):
library, petsclibname = library
spacklibname, petsclibname, useinc, uselib = library
else:
spacklibname = library
petsclibname = library
useinc = True
uselib = True
library_requested = library in spec.dependencies_dict()
library_requested = spacklibname.split(':')[0] in spec.dependencies_dict()
options.append(
'--with-{library}={value}'.format(
library=petsclibname,
value=('1' if library_requested else '0'))
)
if library_requested:
if useinc or uselib:
if useinc:
options.append(
'--with-{library}-include={value}'.format(
library=petsclibname,
value=spec[spacklibname].prefix.include)
)
if uselib:
options.append(
'--with-{library}-lib={value}'.format(
library=petsclibname,
value=spec[spacklibname].libs.joined())
)
else:
options.append(
'--with-{library}-dir={path}'.format(
library=petsclibname, path=spec[library].prefix)
library=petsclibname, path=spec[spacklibname].prefix)
)
if '+cuda' in spec:
@ -441,67 +454,9 @@ def install(self, spec, prefix):
options.append('CUDAFLAGS=-gencode arch=compute_{0},code=sm_{0}'
.format(cuda_arch[0]))
# PETSc does not pick up SuperluDist from the dir as they look for
# superlu_dist_4.1.a
if 'superlu-dist' in spec:
if spec.satisfies('@3.10.3:'):
options.append('--with-cxx-dialect=C++11')
options.extend([
'--with-superlu_dist-include=%s' %
spec['superlu-dist'].prefix.include,
'--with-superlu_dist-lib=%s' %
join_path(spec['superlu-dist'].prefix.lib,
'libsuperlu_dist.a'),
'--with-superlu_dist=1'
])
else:
options.append(
'--with-superlu_dist=0'
)
# SuiteSparse: configuring using '--with-suitesparse-dir=...' has some
# issues, so specify directly the include path and the libraries.
if '+suite-sparse' in spec:
ss_spec = 'suite-sparse:umfpack,klu,cholmod,btf,ccolamd,colamd,' \
'camd,amd,suitesparseconfig'
options.extend([
'--with-suitesparse-include=%s' % spec[ss_spec].prefix.include,
'--with-suitesparse-lib=%s' % spec[ss_spec].libs.joined(),
'--with-suitesparse=1'
])
else:
options.append('--with-suitesparse=0')
# PTScotch: Since we are not using the Parmetis wrapper for now,
# we cannot use '--with-ptscotch-dir=...'
if '+ptscotch' in spec:
options.extend([
'--with-ptscotch-include=%s' % spec['scotch'].prefix.include,
'--with-ptscotch-lib=%s' % spec['scotch'].libs.joined(),
'--with-ptscotch=1'
])
else:
options.append('--with-ptscotch=0')
# hdf5: configure detection is convoluted for pflotran
if '+hdf5' in spec:
options.extend([
'--with-hdf5-include=%s' % spec['hdf5'].prefix.include,
'--with-hdf5-lib=%s' % spec['hdf5:hl,fortran'].libs.joined(),
'--with-hdf5=1'
])
else:
options.append('--with-hdf5=0')
# zlib: configuring using '--with-zlib-dir=...' has some issues with
# SuiteSparse so specify directly the include path and the libraries.
if 'zlib' in spec:
options.extend([
'--with-zlib-include=%s' % spec['zlib'].prefix.include,
'--with-zlib-lib=%s' % spec['zlib'].libs.joined(),
'--with-zlib=1'
])
else:
options.append('--with-zlib=0')
if '+mkl-pardiso' in spec:
options.append(