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sopt: new package (#46837)

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Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
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Tuomas Koskela 2024-10-10 09:10:16 +01:00 committed by GitHub
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commit c1fc98eef8
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# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class Sopt(CMakePackage):
"""SOPT is an open-source C++ package available under the license below. It performs
Sparse OPTimisation using state-of-the-art convex optimisation algorithms. It solves a
variety of sparse regularisation problems, including the Sparsity Averaging Reweighted
Analysis (SARA) algorithm.
"""
homepage = "https://astro-informatics.github.io/sopt/"
url = "https://github.com/astro-informatics/sopt/archive/refs/tags/v4.2.0.tar.gz"
git = "https://github.com/astro-informatics/sopt"
maintainers("tkoskela", "mmcleod89", "20DM")
license("GPL-2.0")
version("4.2.0", sha256="25e579722f8e049d37c9155affa57ec2f38a2f8414c9cf430da2b7bafc86907b")
variant("tests", default=False, description="Build tests")
variant("examples", default=False, description="Build examples")
variant("benchmarks", default=False, description="Build benchmarks")
variant("openmp", default=False, description="Enable multithreading with OpenMP")
variant("mpi", default=False, description="Enable parallelisation with MPI")
variant("docs", default=False, description="Enable multithreading with OpenMP")
variant("coverage", default=False, description="Enable code coverage")
variant("onnxrt", default=False, description="Build with Tensorflow support using onnx")
depends_on("cmake@3")
depends_on("eigen@3.4")
depends_on("libtiff@4")
depends_on("mpi", when="+mpi")
depends_on("catch2@3.4:3", when="+tests")
depends_on("benchmark@1.8~performance_counters", when="+benchmarks")
depends_on("onnx@1.16:", when="+onnxrt")
depends_on("doxygen@1.8:1.12+graphviz", when="+docs")
patch(
"https://github.com/astro-informatics/sopt/commit/836171f32d39a3fbc1147d6c302a08a61f842fee.patch?full_index=1",
sha256="00729db4695712c3fb38aeb9e23a17107a7c8504c3a8249d9d4ddd2782d29661",
when="@4.2.0",
)
def cmake_args(self):
args = [
self.define_from_variant("tests", "tests"),
self.define_from_variant("examples", "examples"),
self.define_from_variant("benchmarks", "benchmarks"),
self.define_from_variant("openmp", "openmp"),
self.define_from_variant("dompi", "mpi"),
self.define_from_variant("docs", "docs"),
self.define_from_variant("coverage", "coverage"),
self.define_from_variant("onnxrt", "onnxrt"),
]
return args
def setup_run_environment(self, env):
if "+tests" in self.spec:
env.prepend_path("PATH", self.spec.prefix.tests)
if "+examples" in self.spec:
env.prepend_path("PATH", join_path(self.spec.prefix, "examples"))
if "+benchmarks" in self.spec:
env.prepend_path("PATH", join_path(self.spec.prefix, "benchmarks"))
def install(self, spec, prefix):
with working_dir(self.build_directory):
make("install")
if "+tests" in spec:
install_tree("cpp/tests", spec.prefix.tests)
if "+examples" in spec:
install_tree("cpp/examples", join_path(spec.prefix, "examples"))
if "+benchmarks" in spec:
install_tree("cpp/benchmarks", join_path(spec.prefix, "benchmarks"))