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Merge pull request #517 from epfl-scitas/packages/petsc

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Improved package : petsc
This commit is contained in:
Todd Gamblin 2016-03-09 08:39:41 -08:00
commit ca343889fc
1 changed files with 69 additions and 23 deletions
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var/spack/repos/builtin/packages/petsc/package.py
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@ -1,40 +1,86 @@
import os
from spack import * from spack import *
class Petsc(Package): class Petsc(Package):
"""PETSc is a suite of data structures and routines for the """
scalable (parallel) solution of scientific applications modeled by PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientific applications
partial differential equations.""" modeled by partial differential equations.
"""
homepage = "http://www.mcs.anl.gov/petsc/index.html" homepage = "http://www.mcs.anl.gov/petsc/index.html"
url = "http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.5.3.tar.gz" url = "http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.5.3.tar.gz"
version('3.6.3', '91dd3522de5a5ef039ff8f50800db606')
version('3.5.3', 'd4fd2734661e89f18ac6014b5dd1ef2f') version('3.5.3', 'd4fd2734661e89f18ac6014b5dd1ef2f')
version('3.5.2', 'ad170802b3b058b5deb9cd1f968e7e13') version('3.5.2', 'ad170802b3b058b5deb9cd1f968e7e13')
version('3.5.1', 'a557e029711ebf425544e117ffa44d8f') version('3.5.1', 'a557e029711ebf425544e117ffa44d8f')
depends_on("python @2.6:2.9") # requires Python for building variant('shared', default=True, description='Enables the build of shared libraries')
variant('mpi', default=True, description='Activates MPI support')
variant('double', default=True, description='Switches between single and double precision')
depends_on("boost") variant('metis', default=True, description='Activates support for metis and parmetis')
depends_on("blas") variant('hdf5', default=True, description='Activates support for HDF5 (only parallel)')
depends_on("lapack") variant('boost', default=True, description='Activates support for Boost')
depends_on("hypre") variant('hypre', default=True, description='Activates support for Hypre')
depends_on("parmetis")
depends_on("metis") # Build dependencies
depends_on("hdf5+mpi") depends_on('python @2.6:2.9') # requires Python for building
depends_on("mpi")
# Virtual dependencies
depends_on('blas')
depends_on('lapack')
depends_on('mpi', when='+mpi')
# Other dependencies
depends_on('boost', when='+boost')
depends_on('metis', when='+metis')
depends_on('hdf5~cxx~unsupported+mpi', when='+hdf5+mpi')
depends_on('parmetis', when='+metis+mpi')
depends_on('hypre', when='+hypre+mpi')
def mpi_dependent_options(self):
if '~mpi' in self.spec:
compiler_opts = [
'--with-cc=%s' % os.environ['CC'],
'--with-cxx=%s' % (os.environ['CXX'] if self.compiler.cxx is not None else '0'),
'--with-fc=%s' % (os.environ['FC'] if self.compiler.fc is not None else '0'),
'--with-mpi=0'
]
error_message_fmt = '\t{library} support requires "+mpi" to be activated'
errors = [error_message_fmt.format(library=x) for x in ('hdf5', 'hypre') if ('+'+x) in self.spec]
if errors:
errors = ['incompatible variants given'] + errors
raise RuntimeError('\n'.join(errors))
else:
compiler_opts = [
'--with-mpi=1',
'--with-mpi-dir=%s' % self.spec['mpi'].prefix,
]
return compiler_opts
def install(self, spec, prefix): def install(self, spec, prefix):
configure("--prefix=%s" % prefix, options = []
"--with-blas-lib=%s/libblas.a" % spec['blas'].prefix.lib, options.extend(self.mpi_dependent_options())
"--with-lapack-lib=%s/liblapack.a" % spec['lapack'].prefix.lib, options.extend([
"--with-boost-dir=%s" % spec['boost'].prefix, '--with-precision=%s' % ('double' if '+double' in spec else 'single'),
"--with-hypre-dir=%s" % spec['hypre'].prefix, '--with-shared-libraries=%s' % ('1' if '+shared' in spec else '0'),
"--with-parmetis-dir=%s" % spec['parmetis'].prefix, '--with-blas-lapack-dir=%s' % spec['lapack'].prefix
"--with-metis-dir=%s" % spec['metis'].prefix, ])
"--with-hdf5-dir=%s" % spec['hdf5'].prefix, # Activates library support if needed
"--with-mpi-dir=%s" % spec['mpi'].prefix, for library in ('metis', 'boost', 'hfd5', 'hypre', 'parmetis'):
"--with-shared-libraries=0") options.append(
'--with-{library}={value}'.format(library=library, value=('1' if library in spec else '0'))
)
if library in spec:
options.append(
'--with-{library}-dir={path}'.format(library=library, path=spec[library].prefix)
)
configure('--prefix=%s' % prefix, *options)
# PETSc has its own way of doing parallel make. # PETSc has its own way of doing parallel make.
make('MAKE_NP=%s' % make_jobs, parallel=False) make('MAKE_NP=%s' % make_jobs, parallel=False)
make("install") make("install")