foam-extend: modification to accept flex version >= 2.6 (#2452)
* Modification to accept flex version >= 2.6 + bug fix on paraview dependency * flake8 "corrections"
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@ -39,7 +39,7 @@ class FoamExtend(Package):
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depends_on('mpi')
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depends_on('python')
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depends_on('flex@:2.5.99')
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depends_on('flex')
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depends_on('zlib')
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depends_on('cmake', type='build')
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@ -92,7 +92,7 @@ def patch(self):
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filter_file(
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r'-lMGridGen',
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r'-lmgrid',
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'src/fvAgglomerationMethods/MGridGenGamgAgglomeration/Make/options') # noqa
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'src/fvAgglomerationMethods/MGridGenGamgAgglomeration/Make/options') # noqa: E501
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# Get the wmake arch and compiler
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(arch, foam_compiler) = self.set_arch()
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@ -155,11 +155,11 @@ def patch(self):
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if '+paraview' in self.spec:
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prefs_dict['PARAVIEW_SYSTEM'] = 1
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prefs_dict['PARAVIEW_DIR'] = self.spec['paraview'].prefix,
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prefs_dict['PARAVIEW_BIN_DIR'] = self.spec['paraview'].prefix.bin,
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prefs_dict['PARAVIEW_DIR'] = self.spec['paraview'].prefix
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prefs_dict['PARAVIEW_BIN_DIR'] = self.spec['paraview'].prefix.bin
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prefs_dict['QT_SYSTEM'] = 1
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prefs_dict['QT_DIR'] = self.spec['qt'].prefix,
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prefs_dict['QT_BIN_DIR'] = self.spec['qt'].prefix.bin,
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prefs_dict['QT_DIR'] = self.spec['qt'].prefix
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prefs_dict['QT_BIN_DIR'] = self.spec['qt'].prefix.bin
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# write the prefs files to define the configuration needed,
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# only the prefs.sh is used by this script but both are
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@ -215,6 +215,22 @@ def patch(self):
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for key, val in compiler_flags.iteritems():
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fh.write('{0}{1} = {2}\n'.format(comp, key, val))
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_files_to_patch = [
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'src/thermophysicalModels/reactionThermo/chemistryReaders/chemkinReader/chemkinLexer.L', # noqa: E501
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'src/surfMesh/surfaceFormats/stl/STLsurfaceFormatASCII.L', # noqa: E501
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'src/meshTools/triSurface/triSurface/interfaces/STL/readSTLASCII.L', # noqa: E501
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'applications/utilities/preProcessing/fluentDataToFoam/fluentDataToFoam.L', # noqa: E501
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'applications/utilities/mesh/conversion/gambitToFoam/gambitToFoam.L', # noqa: E501
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'applications/utilities/mesh/conversion/fluent3DMeshToFoam/fluent3DMeshToFoam.L', # noqa: E501
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'applications/utilities/mesh/conversion/ansysToFoam/ansysToFoam.L', # noqa: E501
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'applications/utilities/mesh/conversion/fluentMeshToFoam/fluentMeshToFoam.L', # noqa: E501
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'applications/utilities/mesh/conversion/fluent3DMeshToElmer/fluent3DMeshToElmer.L' # noqa: E501
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]
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for _file in _files_to_patch:
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filter_file(r'#if YY_FLEX_SUBMINOR_VERSION < 34',
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r'#if YY_FLEX_MAJOR_VERSION <= 2 && YY_FLEX_MINOR_VERSION <= 5 && YY_FLEX_SUBMINOR_VERSION < 34', # noqa: E501
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_file)
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def setup_environment(self, spack_env, run_env):
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with working_dir(self.stage.path):
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spack_env.set('FOAM_INST_DIR', os.path.abspath('.'))
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@ -240,6 +256,7 @@ def install(self, spec, prefix):
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if '+source' in spec:
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install_tree('src', join_path(install_path, 'src'))
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install_tree('tutorials', join_path(install_path, 'tutorials'))
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install_tree('lib', join_path(install_path, 'lib'))
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install_tree('bin', join_path(install_path, 'bin'))
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