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netlib-scalapack: fix compatibility with mpi2 i.e openmpi-4 (#11124)

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This commit is contained in:
Satish Balay 2019-04-07 10:01:54 -05:00 committed by GitHub
parent ed66ccb6f2
commit d11b1b18f0
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GPG Key ID: 4AEE18F83AFDEB23
2 changed files with 145 additions and 0 deletions
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143
var/spack/repos/builtin/packages/netlib-scalapack/mpi2-compatibility.patch Normal file
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@ -0,0 +1,143 @@
diff --git a/BLACS/SRC/blacs_get_.c b/BLACS/SRC/blacs_get_.c
index 3592e56..9ecd6eb 100644
--- a/BLACS/SRC/blacs_get_.c
+++ b/BLACS/SRC/blacs_get_.c
@@ -22,7 +22,7 @@ F_VOID_FUNC blacs_get_(int *ConTxt, int *what, int *val)
case SGET_MSGIDS:
if (BI_COMM_WORLD == NULL) Cblacs_pinfo(val, &val[1]);
iptr = &val[1];
- ierr=MPI_Attr_get(MPI_COMM_WORLD, MPI_TAG_UB, (BVOID **) &iptr,val);
+ ierr=MPI_Comm_get_attr(MPI_COMM_WORLD, MPI_TAG_UB, (BVOID **) &iptr,val);
val[0] = 0;
val[1] = *iptr;
break;
diff --git a/BLACS/SRC/cgamn2d_.c b/BLACS/SRC/cgamn2d_.c
index 2db6ccb..6958f32 100644
--- a/BLACS/SRC/cgamn2d_.c
+++ b/BLACS/SRC/cgamn2d_.c
@@ -221,7 +221,7 @@ F_VOID_FUNC cgamn2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/cgamx2d_.c b/BLACS/SRC/cgamx2d_.c
index 707c0b6..f802d01 100644
--- a/BLACS/SRC/cgamx2d_.c
+++ b/BLACS/SRC/cgamx2d_.c
@@ -221,7 +221,7 @@ F_VOID_FUNC cgamx2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/dgamn2d_.c b/BLACS/SRC/dgamn2d_.c
index dff23b4..a2627ac 100644
--- a/BLACS/SRC/dgamn2d_.c
+++ b/BLACS/SRC/dgamn2d_.c
@@ -221,7 +221,7 @@ F_VOID_FUNC dgamn2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/dgamx2d_.c b/BLACS/SRC/dgamx2d_.c
index a51f731..2a644d0 100644
--- a/BLACS/SRC/dgamx2d_.c
+++ b/BLACS/SRC/dgamx2d_.c
@@ -221,7 +221,7 @@ F_VOID_FUNC dgamx2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/igamn2d_.c b/BLACS/SRC/igamn2d_.c
index 16bc003..f6a7859 100644
--- a/BLACS/SRC/igamn2d_.c
+++ b/BLACS/SRC/igamn2d_.c
@@ -218,7 +218,7 @@ F_VOID_FUNC igamn2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/igamx2d_.c b/BLACS/SRC/igamx2d_.c
index 8165cbe..a7cfcc6 100644
--- a/BLACS/SRC/igamx2d_.c
+++ b/BLACS/SRC/igamx2d_.c
@@ -218,7 +218,7 @@ F_VOID_FUNC igamx2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/sgamn2d_.c b/BLACS/SRC/sgamn2d_.c
index d6c95e5..569c797 100644
--- a/BLACS/SRC/sgamn2d_.c
+++ b/BLACS/SRC/sgamn2d_.c
@@ -221,7 +221,7 @@ F_VOID_FUNC sgamn2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/sgamx2d_.c b/BLACS/SRC/sgamx2d_.c
index 4b0af6f..8897ece 100644
--- a/BLACS/SRC/sgamx2d_.c
+++ b/BLACS/SRC/sgamx2d_.c
@@ -221,7 +221,7 @@ F_VOID_FUNC sgamx2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/zgamn2d_.c b/BLACS/SRC/zgamn2d_.c
index 9de2b23..37897df 100644
--- a/BLACS/SRC/zgamn2d_.c
+++ b/BLACS/SRC/zgamn2d_.c
@@ -221,7 +221,7 @@ F_VOID_FUNC zgamn2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;
diff --git a/BLACS/SRC/zgamx2d_.c b/BLACS/SRC/zgamx2d_.c
index 414c381..0e9d474 100644
--- a/BLACS/SRC/zgamx2d_.c
+++ b/BLACS/SRC/zgamx2d_.c
@@ -221,7 +221,7 @@ F_VOID_FUNC zgamx2d_(int *ConTxt, F_CHAR scope, F_CHAR top, int *m, int *n,
{
#endif
i = 2;
- ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
+ ierr=MPI_Type_create_struct(i, len, disp, dtypes, &MyType);
ierr=MPI_Type_commit(&MyType);
bp->N = bp2->N = 1;
bp->dtype = bp2->dtype = MyType;

2
var/spack/repos/builtin/packages/netlib-scalapack/package.py
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@ -41,6 +41,8 @@ class NetlibScalapack(CMakePackage):
# See: https://github.com/Reference-ScaLAPACK/scalapack/issues/9 # See: https://github.com/Reference-ScaLAPACK/scalapack/issues/9
patch("cmake_fortran_mangle.patch", when='@2.0.2:') patch("cmake_fortran_mangle.patch", when='@2.0.2:')
# See: https://github.com/Reference-ScaLAPACK/scalapack/pull/10
patch("mpi2-compatibility.patch", when='@2.0.2:')
@property @property
def libs(self): def libs(self):