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breseq: fix dependency and limit compiler version. (#13013)

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Toyohisa Kameyama 2019-10-03 01:56:37 +09:00 committed by Adam J. Stewart
parent a3a0e1cd2e
commit d238b9d394
1 changed files with 4 additions and 1 deletions
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5
var/spack/repos/builtin/packages/breseq/package.py
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@ -22,11 +22,14 @@ class Breseq(AutotoolsPackage):
depends_on('automake', type='build') depends_on('automake', type='build')
depends_on('libtool', type='build') depends_on('libtool', type='build')
depends_on('m4', type='build') depends_on('m4', type='build')
depends_on('zlib', type='build') depends_on('zlib', type='link')
depends_on('bedtools2', type='run') depends_on('bedtools2', type='run')
depends_on('r', type='run') depends_on('r', type='run')
conflicts('%gcc@:4.8')
conflicts('%clang@:3.3')
def setup_environment(self, spack_env, run_env): def setup_environment(self, spack_env, run_env):
spack_env.set('LDFLAGS', spack_env.set('LDFLAGS',
"-L{0}".format(self.spec['zlib'].prefix.lib)) "-L{0}".format(self.spec['zlib'].prefix.lib))