zhangyiss/spack
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

py-macs2: add version 2.2.7.1 and support python@3.10: (#34970)

Browse Source 
* py-macs2: add version 2.2.7.1 and support python@3.10:

The tarball from PyPi includes the Cythonized C files. The tarball from
github does not. Remove the Cythonized C files from the source so that
they are rebuilt with the Spack Python/Cython combination. This is
necessary for python-3.10 but make sense for other combinations as well.

* Edits based on review

- set python version constraint on version 2.2.4
- removed all python-2 versions and related constraints.
This commit is contained in:
Glenn Johnson 2023-01-17 00:00:41 -06:00 committed by GitHub
parent 3ed219578b
commit d276a5f8e4
No known key found for this signature in database
GPG Key ID: 4AEE18F83AFDEB23
1 changed files with 21 additions and 3 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

24
var/spack/repos/builtin/packages/py-macs2/package.py
View File

@ -4,6 +4,8 @@
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import glob
from spack.package import *
@ -13,13 +15,29 @@ class PyMacs2(PythonPackage):
homepage = "https://github.com/taoliu/MACS"
pypi = "MACS2/MACS2-2.2.4.tar.gz"
version("2.2.7.1", sha256="ad2ca69bdd02a8942a68aae23133289b5c16ba382bcbe20c39fabf3948929de5")
version("2.2.4", sha256="b131aadc8f5fd94bec35308b821e1f7585def788d2e7c756fc8cac402ffee25b")
depends_on("python@3.5:", type=("build", "run"))
# patch to correctly identify python-3.10 as greater than required version
patch(
"https://github.com/macs3-project/MACS/pull/497.patch?full_index=1",
sha256="eaff891b9b3c6a910bd5d454dcc6e21288c8d1ad4d6d6f77e370bc8f90921cbd",
when="@2.2.7.1^python@3.10:",
)
depends_on("python@3.6:", when="@2.2.7.1:", type=("build", "run"))
# version 2.2.4 does not build with python-3.10
depends_on("python@3.5:3.9", when="@2.2.4", type=("build", "run"))
depends_on("py-cython", type="build")
# Most Python packages only require py-setuptools as a build dependency.
# However, py-macs2 requires py-setuptools during runtime as well.
depends_on("py-setuptools", type=("build", "run"))
depends_on("py-numpy@1.17:", type=("build", "run"))
depends_on("py-numpy@1.16:", type=("build", "run"))
depends_on("py-setuptools@41.2:", when="@2.2.4:", type=("build", "run"))
depends_on("py-numpy@1.17:", when="@2.2.4:", type=("build", "run"))
depends_on("py-cython@0.29:", when="@2.2.4:", type="build")
def patch(self):
# regenerate C files from pyx files with cython
files = glob.glob("MACS2/**/[!c]*.c", recursive=True)
force_remove(*files)