fraggenescan: new package at v1.31 (#16587)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
This commit is contained in:
parent
c9df2dea95
commit
d2d35f80d1
25
var/spack/repos/builtin/packages/fraggenescan/package.py
Normal file
25
var/spack/repos/builtin/packages/fraggenescan/package.py
Normal file
@ -0,0 +1,25 @@
|
|||||||
|
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
|
||||||
|
# Spack Project Developers. See the top-level COPYRIGHT file for details.
|
||||||
|
#
|
||||||
|
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
|
||||||
|
|
||||||
|
from spack import *
|
||||||
|
|
||||||
|
|
||||||
|
class Fraggenescan(MakefilePackage):
|
||||||
|
"""FragGeneScan is an application for finding (fragmented) genes in short
|
||||||
|
reads. It can also be applied to predict prokaryotic genes in
|
||||||
|
incomplete assemblies or complete genomes."""
|
||||||
|
|
||||||
|
homepage = "https://sourceforge.net/projects/fraggenescan/"
|
||||||
|
url = "https://downloads.sourceforge.net/project/fraggenescan/FragGeneScan1.31.tar.gz"
|
||||||
|
|
||||||
|
version('1.31', sha256='cd3212d0f148218eb3b17d24fcd1fc897fb9fee9b2c902682edde29f895f426c')
|
||||||
|
|
||||||
|
build_targets = ['fgs']
|
||||||
|
|
||||||
|
def edit(self, spec, prefix):
|
||||||
|
filter_file('gcc', spack_cc, 'Makefile', string=True)
|
||||||
|
|
||||||
|
def install(self, spec, prefix):
|
||||||
|
install_tree('.', prefix.bin)
|
Loading…
Reference in New Issue
Block a user