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r-dada2: new package at 1.14 (#13492)

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* r-dada2: new package at 1.14

* r-dada2: add gmake dependency

* Update var/spack/repos/builtin/packages/r-dada2/package.py

Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
This commit is contained in:
Justin S 2019-10-29 18:08:51 -05:00 committed by Adam J. Stewart
parent c99d367a11
commit d76ec7b2da
1 changed files with 29 additions and 0 deletions
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var/spack/repos/builtin/packages/r-dada2/package.py Normal file
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# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class RDada2(RPackage):
"""Accurate sample inference from amplicon data with single nucleotide
resolution"""
homepage = "http://benjjneb.github.io/dada2/"
url = "https://github.com/benjjneb/dada2/archive/v1.14.tar.gz"
version('1.14', sha256='19980b9d7b0a0e80e86010357cae11d1fc07c2d02067c4445169143cf1f99906')
depends_on('r@3.4:', type=('build', 'run'))
depends_on('r-rcpp@0.12.0:', type=('build', 'run'))
depends_on('r-biostrings@2.42.1:', type=('build', 'run'))
depends_on('r-ggplot2@2.1.0:', type=('build', 'run'))
depends_on('r-reshape2@1.4.1:', type=('build', 'run'))
depends_on('r-shortread@1.32.0:', type=('build', 'run'))
depends_on('r-rcppparallel@4.3.0:', type=('build', 'run'))
depends_on('r-iranges@2.6.0:', type=('build', 'run'))
depends_on('r-xvector@0.16.0:', type=('build', 'run'))
depends_on('r-biocgenerics@0.22.0:', type=('build', 'run'))
depends_on('gmake', type='build')