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CEED v3.0 release (#15500)

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* [mfem] A few updates: add 'strumpack' variant; add 'zlib'
       variant (same as 'gzstream'); fix optmization flag
       for v4.0.

* [mfem] flake8 fix

* [mfem] Add version 4.1

* [mfem] Add/tweak some 'conflicts' directives.

* [gslib] Add new release versions + 'develop' version.

* [petsc] Restrict hdf5 version to <= 1.10.99 since 1.12.0 fails

* [metis] Use the original metis url for v4.0.3.

* [conduit] Remove restrictions to the used hdf5 variant to allow
          building with other packages that use hdf5, e.g. petsc.

* [mfem] Few updates:
* Replace the 'gzstream' variant with 'zlib' variant.
* Do not add system library paths with -L flags.
* Allow '+pumi+shared' variant.
* Update the 'test_builds.sh' script.

* [occa] Add version 1.0.9.

* [mfem] Some OCCA and RAJA updates.

* [gslib] Fix the build for new versions of the library.

* [mfem] Add 'gslib' variant for GSLIB.

* [mfem] Add 'cuda' variant.

* [mfem] Add 'libceed' variant + a few more tweaks.

* [mfem] Add 'umpire' variant.

* [ceed] Add a draft for v3.0. Not tested. Just made sure that
       concretization works for 'ceed' and 'ceed+cuda'.

* [nek] Fix Nek5000/NekCEM

* [nek] Add Nek5000-v19 & polishing Nek packages

* [flake8] Fix flake8 failure

* petsc: use of HDF5 does not care about +hl+fortran

* [petsc] Temporarily allow any hypre version with petsc@develop.

[ceed] Remove the requirement for hypre@develop.

* [libceed] Do not explicitly set NVCCFLAGS for v0.5 and later.

* [laghos] Add version 3.0, pointing to dev branch for now.
         Do not set CXX at the make command line.
         Simplify the dependecy directives a little.

[ceed] Use laghos v3.0 for ceed v3.0.0.

* [laghos] Keep the injection of CXX in the makefile for laghos
         versions <= 2.0.

* [nekcem] Recovert hash-versions used by older versions of the
         'ceed' package.

* [occa] Disable hip autodetection because it fails on some machines.

* [laghos] Update v3.0 with the actual release source.

* [suite-sparse] Explicitly add the c11 flag to CFLAGS.

* Update package.py (#15749)

* [magma] Add forgotten specification of the 'cuda_arch' variant.

* [ceed] Use magma v2.5.3 for ceed v3.0.

* libceed-0.6

* mfem: depend on libceed 0.6:, not 0.6.0:

* [libceed] Add 'magma' variant -- enable MAGMA backend.

* [ceed] In v3.0, use '+magma' variant of libceed when cuda is enabled.

* Initial package for Remhos (needs to be updated with actual sha256

* Adding Remhos to CEED-3.0, for now @develop

* petsc: add 3.13.0 (using petsc-lite) and 3.12.5

* ceed: update to petsc@3.13.0:3.13.99

* Temporary fix

* [nekcem] Add hash-version for ceed v3.0.

* [nek5000] Simplify source urls.

* [nektools] Use the same sources and versions as in nek5000.

* [ceed] Update Nek-related package versions.

* libceed: add v0.6 portabilty fix

* libceed: better v0.6 portabilty fix

* Adding Remhos 1.0 release in CEED-3.0

* Updating hash for Remhos-1.0

* [petsc] Add cuda variant.

* [libceed] Flake8 fix.

* [petsc] Add cuda variant.

* [ceed] Fix the OCCA version to 1.0.9. Enable petsc+cuda when
       compiling ceed@3.0.0+cuda.

* nek5000: fix python 2.7+ syntax

* [laghos] Fix testing.

* [remhos] Fix testing.

* [remhos] For testing use the 'tests' target instead of 'test'.

* Add/update the maintainers for ceed, libceed, mfem, laghos, and remhos.

* [ceed] Remove unnecessary dependencies.

* libceed: activate AVX when supported

Co-authored-by: Thilina Rathnayake <thilinarmtb@gmail.com>
Co-authored-by: Jed Brown <jed@jedbrown.org>
Co-authored-by: Stan Tomov <tomov@eecs.utk.edu>
Co-authored-by: Tzanio <tzanio@llnl.gov>
This commit is contained in:
Veselin Dobrev
2020-04-18 16:57:57 -07:00
committed by GitHub
parent d640bf899a
commit d9992a778f
17 changed files with 470 additions and 162 deletions
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59
var/spack/repos/builtin/packages/ceed/package.py
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@@ -16,15 +16,19 @@ class Ceed(BundlePackage):
homepage = "https://ceed.exascaleproject.org"
version('2.0')
maintainers = ['jedbrown', 'v-dobrev', 'tzanio']
version('3.0.0')
version('2.0.0')
version('1.0.0')
variant('cuda', default=False,
description='Build MAGMA; enable CUDA support in libCEED and OCCA')
variant('mfem', default=True, description='Build MFEM and Laghos')
description='Enable CUDA support')
variant('mfem', default=True, description='Build MFEM, Laghos and Remhos')
variant('nek', default=True,
description='Build Nek5000, GSLIB, Nekbone, and NekCEM')
variant('occa', default=True,
description='Build OCCA; enable OCCA support in libCEED')
description='Enable OCCA support')
variant('petsc', default=True,
description='Build PETSc and HPGMG')
variant('pumi', default=True,
@@ -34,6 +38,11 @@ class Ceed(BundlePackage):
# TODO: Add 'int64' variant?
# LibCEED
# ceed-3.0
depends_on('libceed@0.6~cuda', when='@3.0.0~cuda')
depends_on('libceed@0.6+cuda+magma', when='@3.0.0+cuda')
depends_on('libceed@0.6+occa', when='@3.0.0+occa')
depends_on('libceed@0.6~occa', when='@3.0.0~occa')
# ceed-2.0
depends_on('libceed@0.4~cuda', when='@2.0.0~cuda')
depends_on('libceed@0.4+cuda', when='@2.0.0+cuda')
@@ -46,6 +55,9 @@ class Ceed(BundlePackage):
depends_on('libceed@0.2~occa', when='@1.0.0~occa')
# OCCA
# ceed-3.0
depends_on('occa@1.0.9~cuda', when='@3.0.0+occa~cuda')
depends_on('occa@1.0.9+cuda', when='@3.0.0+occa+cuda')
# ceed-2.0
depends_on('occa@1.0.8~cuda', when='@2.0.0+occa~cuda')
depends_on('occa@1.0.8+cuda', when='@2.0.0+occa+cuda')
@@ -54,6 +66,12 @@ class Ceed(BundlePackage):
depends_on('occa@1.0.0-alpha.5+cuda', when='@1.0.0+occa+cuda')
# Nek5000, GSLIB, Nekbone, and NekCEM
# ceed-3.0
depends_on('nek5000@19.0', when='@3.0.0+nek')
depends_on('nektools@19.0%gcc', when='@3.0.0+nek')
depends_on('gslib@1.0.6', when='@3.0.0+nek')
depends_on('nekbone@17.0', when='@3.0.0+nek')
depends_on('nekcem@c8db04b', when='@3.0.0+nek')
# ceed-2.0
depends_on('nek5000@17.0', when='@2.0.0+nek')
depends_on('nektools@17.0%gcc', when='@2.0.0+nek')
@@ -67,7 +85,17 @@ class Ceed(BundlePackage):
depends_on('nekbone@17.0', when='@1.0.0+nek')
depends_on('nekcem@0b8bedd', when='@1.0.0+nek')
# PETSc, HPGMG
# PETSc
# ceed-3.0
depends_on('petsc+cuda', when='@3.0.0+petsc+cuda')
# For a +quickbuild we disable hdf5, and superlu-dist in PETSc.
depends_on('petsc@3.13.0:3.13.99~hdf5~superlu-dist',
when='@3.0.0+petsc+quickbuild')
depends_on('petsc@3.13.0:3.13.99+mpi+double~int64', when='@3.0.0+petsc~mfem')
# The mfem petsc examples need the petsc variants +hypre, +suite-sparse,
# and +mumps:
depends_on('petsc@3.13.0:3.13.99+mpi+hypre+suite-sparse+mumps+double~int64',
when='@3.0.0+petsc+mfem')
# ceed-2.0
# For a +quickbuild we disable hdf5, and superlu-dist in PETSc.
# Ideally, these can be turned into recommendations to Spack for
@@ -94,18 +122,37 @@ class Ceed(BundlePackage):
depends_on('hpgmg@a0a5510df23b+fe', when='@1.0.0+petsc')
# MAGMA
# ceed-3.0
depends_on('magma@2.5.3', when='@3.0.0+cuda')
# ceed-2.0
depends_on('magma@2.5.0', when='@2.0.0+cuda')
# ceed-1.0
depends_on('magma@2.3.0', when='@1.0.0+cuda')
# PUMI
# ceed-3.0
depends_on('pumi@2.2.2', when='@3.0.0+pumi')
# ceed-2.0
depends_on('pumi@2.2.0', when='@2.0.0+pumi')
# ceed-1.0
depends_on('pumi@2.1.0', when='@1.0.0+pumi')
# MFEM, Laghos
# MFEM, Laghos, Remhos
# ceed-3.0
depends_on('mfem@4.1.0+mpi+examples+miniapps', when='@3.0.0+mfem~petsc')
depends_on('mfem@4.1.0+mpi+petsc+examples+miniapps',
when='@3.0.0+mfem+petsc')
depends_on('mfem@4.1.0+pumi', when='@3.0.0+mfem+pumi')
depends_on('mfem@4.1.0+gslib', when='@3.0.0+mfem+nek')
depends_on('mfem@4.1.0+libceed', when='@3.0.0+mfem')
depends_on('mfem@4.1.0+cuda', when='@3.0.0+mfem+cuda')
depends_on('mfem@4.1.0+occa', when='@3.0.0+mfem+occa')
depends_on('laghos@3.0', when='@3.0.0+mfem')
depends_on('remhos@1.0', when='@3.0.0+mfem')
# If using gcc version <= 4.8 build suite-sparse version <= 5.1.0
depends_on('suite-sparse@:5.1.0', when='@3.0.0%gcc@:4.8+mfem+petsc')
# ceed-2.0
depends_on('mfem@3.4.0+mpi+examples+miniapps', when='@2.0.0+mfem~petsc')
depends_on('mfem@3.4.0+mpi+petsc+examples+miniapps',