Merge branch 'develop' of https://github.com/LLNL/spack into packages/espresso
This commit is contained in:
alalazo
@@ -1,12 +0,0 @@
|
||||
compilers:
|
||||
all:
|
||||
clang@3.3:
|
||||
cc: /path/to/clang
|
||||
cxx: /path/to/clang++
|
||||
f77: None
|
||||
fc: None
|
||||
gcc@4.5.0:
|
||||
cc: /path/to/gcc
|
||||
cxx: /path/to/g++
|
||||
f77: /path/to/gfortran
|
||||
fc: /path/to/gfortran
|
||||
@@ -1,33 +0,0 @@
|
||||
from spack import *
|
||||
|
||||
class R(Package):
|
||||
"""R is 'GNU S', a freely available language and environment for
|
||||
statistical computing and graphics which provides a wide va
|
||||
riety of statistical and graphical techniques: linear and
|
||||
nonlinear modelling, statistical tests, time series analysis,
|
||||
classification, clustering, etc. Please consult the R project
|
||||
homepage for further information."""
|
||||
homepage = "http://www.example.com"
|
||||
url = "http://cran.cnr.berkeley.edu/src/base/R-3/R-3.1.2.tar.gz"
|
||||
|
||||
version('3.1.2', '3af29ec06704cbd08d4ba8d69250ae74')
|
||||
|
||||
depends_on("readline")
|
||||
depends_on("ncurses")
|
||||
depends_on("icu")
|
||||
depends_on("glib")
|
||||
depends_on("zlib")
|
||||
depends_on("libtiff")
|
||||
depends_on("jpeg")
|
||||
depends_on("cairo")
|
||||
depends_on("pango")
|
||||
depends_on("freetype")
|
||||
depends_on("tcl")
|
||||
depends_on("tk")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
configure("--prefix=%s" % prefix,
|
||||
"--enable-R-shlib",
|
||||
"--enable-BLAS-shlib")
|
||||
make()
|
||||
make("install")
|
||||
@@ -1,138 +0,0 @@
|
||||
from spack import *
|
||||
|
||||
class Boost(Package):
|
||||
"""Boost provides free peer-reviewed portable C++ source
|
||||
libraries, emphasizing libraries that work well with the C++
|
||||
Standard Library.
|
||||
|
||||
Boost libraries are intended to be widely useful, and usable
|
||||
across a broad spectrum of applications. The Boost license
|
||||
encourages both commercial and non-commercial use.
|
||||
"""
|
||||
homepage = "http://www.boost.org"
|
||||
url = "http://downloads.sourceforge.net/project/boost/boost/1.55.0/boost_1_55_0.tar.bz2"
|
||||
list_url = "http://sourceforge.net/projects/boost/files/boost/"
|
||||
list_depth = 2
|
||||
|
||||
version('1.59.0', '6aa9a5c6a4ca1016edd0ed1178e3cb87')
|
||||
version('1.58.0', 'b8839650e61e9c1c0a89f371dd475546')
|
||||
version('1.57.0', '1be49befbdd9a5ce9def2983ba3e7b76')
|
||||
version('1.56.0', 'a744cf167b05d72335f27c88115f211d')
|
||||
version('1.55.0', 'd6eef4b4cacb2183f2bf265a5a03a354')
|
||||
version('1.54.0', '15cb8c0803064faef0c4ddf5bc5ca279')
|
||||
version('1.53.0', 'a00d22605d5dbcfb4c9936a9b35bc4c2')
|
||||
version('1.52.0', '3a855e0f919107e0ca4de4d84ad3f750')
|
||||
version('1.51.0', '4b6bd483b692fd138aef84ed2c8eb679')
|
||||
version('1.50.0', '52dd00be775e689f55a987baebccc462')
|
||||
version('1.49.0', '0d202cb811f934282dea64856a175698')
|
||||
version('1.48.0', 'd1e9a7a7f532bb031a3c175d86688d95')
|
||||
version('1.47.0', 'a2dc343f7bc7f83f8941e47ed4a18200')
|
||||
version('1.46.1', '7375679575f4c8db605d426fc721d506')
|
||||
version('1.46.0', '37b12f1702319b73876b0097982087e0')
|
||||
version('1.45.0', 'd405c606354789d0426bc07bea617e58')
|
||||
version('1.44.0', 'f02578f5218f217a9f20e9c30e119c6a')
|
||||
version('1.43.0', 'dd49767bfb726b0c774f7db0cef91ed1')
|
||||
version('1.42.0', '7bf3b4eb841b62ffb0ade2b82218ebe6')
|
||||
version('1.41.0', '8bb65e133907db727a2a825c5400d0a6')
|
||||
version('1.40.0', 'ec3875caeac8c52c7c129802a8483bd7')
|
||||
version('1.39.0', 'a17281fd88c48e0d866e1a12deecbcc0')
|
||||
version('1.38.0', '5eca2116d39d61382b8f8235915cb267')
|
||||
version('1.37.0', '8d9f990bfb7e83769fa5f1d6f065bc92')
|
||||
version('1.36.0', '328bfec66c312150e4c2a78dcecb504b')
|
||||
version('1.35.0', 'dce952a7214e72d6597516bcac84048b')
|
||||
version('1.34.1', '2d938467e8a448a2c9763e0a9f8ca7e5')
|
||||
version('1.34.0', 'ed5b9291ffad776f8757a916e1726ad0')
|
||||
|
||||
variant('debug', default=False, description='Switch to the debug version of Boost')
|
||||
variant('python', default=False, description='Activate the component Boost.Python')
|
||||
variant('mpi', default=False, description='Activate the component Boost.MPI')
|
||||
variant('compression', default=True, description='Activate the compression Boost.iostreams')
|
||||
|
||||
depends_on('mpi', when='+mpi')
|
||||
depends_on('python', when='+python')
|
||||
depends_on('zlib', when='+compression')
|
||||
depends_on('bzip2', when='+compression')
|
||||
|
||||
def url_for_version(self, version):
|
||||
"""Handle Boost's weird URLs, which write the version two different ways."""
|
||||
parts = [str(p) for p in Version(version)]
|
||||
dots = ".".join(parts)
|
||||
underscores = "_".join(parts)
|
||||
return "http://downloads.sourceforge.net/project/boost/boost/%s/boost_%s.tar.bz2" % (
|
||||
dots, underscores)
|
||||
|
||||
def determine_toolset(self):
|
||||
toolsets = {'gcc': 'gcc',
|
||||
'icpc': 'intel',
|
||||
'clang++': 'clang'}
|
||||
|
||||
for cc, toolset in toolsets.iteritems():
|
||||
if(cc in self.compiler.cxx_names):
|
||||
return toolset
|
||||
|
||||
# fallback to gcc if no toolset found
|
||||
return 'gcc'
|
||||
|
||||
def determine_bootstrap_options(self, spec, options):
|
||||
options.append('--with-toolset=%s' % self.determine_toolset())
|
||||
|
||||
without_libs = []
|
||||
if '~mpi' in spec:
|
||||
without_libs.append('mpi')
|
||||
if '~python' in spec:
|
||||
without_libs.append('python')
|
||||
else:
|
||||
options.append('--with-python=%s' % (spec['python'].prefix.bin + '/python'))
|
||||
|
||||
if without_libs:
|
||||
options.append('--without-libraries=%s' % ','.join(without_libs))
|
||||
|
||||
with open('user-config.jam', 'w') as f:
|
||||
if '+mpi' in spec:
|
||||
f.write('using mpi : %s ;\n' % (spec['mpi'].prefix.bin + '/mpicxx'))
|
||||
if '+python' in spec:
|
||||
f.write('using python : %s : %s ;\n' % (spec['python'].version,
|
||||
(spec['python'].prefix.bin + '/python')))
|
||||
|
||||
def determine_b2_options(self, spec, options):
|
||||
if '+debug' in spec:
|
||||
options.append('variant=debug')
|
||||
else:
|
||||
options.append('variant=release')
|
||||
|
||||
if '~compression' in spec:
|
||||
options.extend(['-s NO_BZIP2=1',
|
||||
'-s NO_ZLIB=1',
|
||||
])
|
||||
|
||||
if '+compression' in spec:
|
||||
options.extend(['-s BZIP2_INCLUDE=%s' % spec['bzip2'].prefix.include,
|
||||
'-s BZIP2_LIBPATH=%s' % spec['bzip2'].prefix.lib,
|
||||
'-s ZLIB_INCLUDE=%s' % spec['zlib'].prefix.include,
|
||||
'-s ZLIB_LIBPATH=%s' % spec['zlib'].prefix.lib])
|
||||
|
||||
options.extend(['toolset=%s' % self.determine_toolset(),
|
||||
'link=static,shared',
|
||||
'--layout=tagged'])
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# to make him find the user-config.jam
|
||||
env['BOOST_BUILD_PATH'] = './'
|
||||
|
||||
bootstrap = Executable('./bootstrap.sh')
|
||||
|
||||
bootstrap_options = ['--prefix=%s' % prefix]
|
||||
self.determine_bootstrap_options(spec, bootstrap_options)
|
||||
|
||||
bootstrap(*bootstrap_options)
|
||||
|
||||
# b2 used to be called bjam, before 1.47 (sigh)
|
||||
b2name = './b2' if spec.satisfies('@1.47:') else './bjam'
|
||||
|
||||
b2 = Executable(b2name)
|
||||
b2_options = ['-j %s' % make_jobs]
|
||||
|
||||
self.determine_b2_options(spec, b2_options)
|
||||
|
||||
b2('install', 'threading=single', *b2_options)
|
||||
b2('install', 'threading=multi', *b2_options)
|
||||
@@ -1,95 +0,0 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU General Public License (as published by
|
||||
# the Free Software Foundation) version 2.1 dated February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public License
|
||||
# along with this program; if not, write to the Free Software Foundation,
|
||||
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
|
||||
from spack import *
|
||||
|
||||
import os
|
||||
import os.path
|
||||
|
||||
class Clang(Package):
|
||||
"""The goal of the Clang project is to create a new C, C++,
|
||||
Objective C and Objective C++ front-end for the LLVM compiler.
|
||||
"""
|
||||
homepage = 'http://clang.llvm.org'
|
||||
url = 'http://llvm.org/releases/3.7.0/cfe-3.7.0.src.tar.xz'
|
||||
|
||||
depends_on('llvm@3.7.0', when='@3.7.0')
|
||||
depends_on('llvm@3.6.2', when='@3.6.2')
|
||||
depends_on('llvm@3.5.1', when='@3.5.1')
|
||||
|
||||
version('3.7.0', '8f9d27335e7331cf0a4711e952f21f01', url='http://llvm.org/releases/3.7.0/cfe-3.7.0.src.tar.xz')
|
||||
version('3.6.2', 'ff862793682f714bb7862325b9c06e20', url='http://llvm.org/releases/3.6.2/cfe-3.6.2.src.tar.xz')
|
||||
version('3.5.1', '93f9532f8f7e6f1d8e5c1116907051cb', url='http://llvm.org/releases/3.5.1/cfe-3.5.1.src.tar.xz')
|
||||
|
||||
##########
|
||||
# @3.7.0
|
||||
resource(name='clang-tools-extra',
|
||||
url='http://llvm.org/releases/3.7.0/clang-tools-extra-3.7.0.src.tar.xz',
|
||||
md5='d5a87dacb65d981a427a536f6964642e', destination='tools', when='@3.7.0')
|
||||
##########
|
||||
|
||||
def install(self, spec, prefix):
|
||||
env['CXXFLAGS'] = self.compiler.cxx11_flag
|
||||
|
||||
with working_dir('spack-build', create=True):
|
||||
|
||||
options = []
|
||||
if '@3.7.0:' in spec:
|
||||
options.append('-DCLANG_DEFAULT_OPENMP_RUNTIME:STRING=libomp')
|
||||
options.extend(std_cmake_args)
|
||||
|
||||
cmake('..',
|
||||
'-DCLANG_PATH_TO_LLVM_BUILD:PATH=%s' % spec['llvm'].prefix,
|
||||
'-DLLVM_MAIN_SRC_DIR:PATH=%s' % spec['llvm'].prefix,
|
||||
*options)
|
||||
make()
|
||||
make("install")
|
||||
# CLang doesn't look in llvm folders for system headers...
|
||||
self.link_llvm_directories(spec)
|
||||
|
||||
def link_llvm_directories(self, spec):
|
||||
|
||||
def clang_include_dir_at(root):
|
||||
return join_path(root, 'include')
|
||||
|
||||
def clang_lib_dir_at(root):
|
||||
return join_path(root, 'lib/clang/', str(self.version), 'include')
|
||||
|
||||
def do_link(source_dir, destination_dir):
|
||||
if os.path.exists(source_dir):
|
||||
for name in os.listdir(source_dir):
|
||||
source = join_path(source_dir, name)
|
||||
link = join_path(destination_dir, name)
|
||||
os.symlink(source, link)
|
||||
|
||||
# Link folder and files in include
|
||||
llvm_dir = clang_include_dir_at(spec['llvm'].prefix)
|
||||
clang_dir = clang_include_dir_at(self.prefix)
|
||||
do_link(llvm_dir, clang_dir)
|
||||
# Link folder and files in lib
|
||||
llvm_dir = clang_lib_dir_at(spec['llvm'].prefix)
|
||||
clang_dir = clang_lib_dir_at(self.prefix)
|
||||
do_link(llvm_dir, clang_dir)
|
||||
@@ -1,58 +0,0 @@
|
||||
# FIXME: Add copyright statement
|
||||
#
|
||||
from spack import *
|
||||
from contextlib import closing
|
||||
|
||||
class Cube(Package):
|
||||
"""Cube the profile viewer for Score-P and Scalasca profiles. It
|
||||
displays a multi-dimensional performance space consisting
|
||||
of the dimensions (i) performance metric, (ii) call path,
|
||||
and (iii) system resource."""
|
||||
|
||||
homepage = "http://www.scalasca.org/software/cube-4.x/download.html"
|
||||
url = "http://apps.fz-juelich.de/scalasca/releases/cube/4.2/dist/cube-4.2.3.tar.gz"
|
||||
|
||||
version('4.3.3', '07e109248ed8ffc7bdcce614264a2909',
|
||||
url='http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-4.3.3.tar.gz')
|
||||
|
||||
version('4.2.3', '8f95b9531f5a8f8134f279c2767c9b20')
|
||||
|
||||
version('4.3TP1', 'a2090fbc7b2ba394bd5c09ba971e237f',
|
||||
url = 'http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-4.3-TP1.tar.gz')
|
||||
|
||||
# Using CC as C++ compiler provides quirky workaround for a Score-P build system attempt
|
||||
# to guess a matching C compiler when configuring scorep-score
|
||||
backend_user_provided = """\
|
||||
CC=cc
|
||||
CXX=CC
|
||||
F77=f77
|
||||
FC=f90
|
||||
#CFLAGS=-fPIC
|
||||
#CXXFLAGS=-fPIC
|
||||
"""
|
||||
frontend_user_provided = """\
|
||||
CC_FOR_BUILD=cc
|
||||
CXX_FOR_BUILD=CC
|
||||
F77_FOR_BUILD=f70
|
||||
FC_FOR_BUILD=f90
|
||||
"""
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# Use a custom compiler configuration, otherwise the score-p
|
||||
# build system messes with spack's compiler settings.
|
||||
# Create these three files in the build directory
|
||||
|
||||
with closing(open("vendor/common/build-config/platforms/platform-backend-user-provided", "w")) as backend_file:
|
||||
backend_file.write(self.backend_user_provided)
|
||||
with closing(open("vendor/common/build-config/platforms/platform-frontend-user-provided", "w")) as frontend_file:
|
||||
frontend_file.write(self.frontend_user_provided)
|
||||
|
||||
configure_args = ["--prefix=%s" % prefix,
|
||||
"--with-custom-compilers",
|
||||
"--without-paraver",
|
||||
"--without-gui"]
|
||||
|
||||
configure(*configure_args)
|
||||
|
||||
make(parallel=False)
|
||||
make("install", parallel=False)
|
||||
@@ -1,50 +0,0 @@
|
||||
from spack import *
|
||||
|
||||
class Hdf5(Package):
|
||||
"""HDF5 is a data model, library, and file format for storing and managing
|
||||
data. It supports an unlimited variety of datatypes, and is designed for
|
||||
flexible and efficient I/O and for high volume and complex data.
|
||||
"""
|
||||
|
||||
homepage = "http://www.hdfgroup.org/HDF5/"
|
||||
url = "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8.13/src/hdf5-1.8.13.tar.gz"
|
||||
list_url = "http://www.hdfgroup.org/ftp/HDF5/releases"
|
||||
list_depth = 3
|
||||
|
||||
version('1.8.16', 'b8ed9a36ae142317f88b0c7ef4b9c618')
|
||||
version('1.8.15', '03cccb5b33dbe975fdcd8ae9dc021f24')
|
||||
version('1.8.13', 'c03426e9e77d7766944654280b467289')
|
||||
|
||||
variant('mpi', default=False, description='Enable MPI support')
|
||||
|
||||
depends_on("mpi", when='+mpi')
|
||||
depends_on("zlib")
|
||||
|
||||
# TODO: currently hard-coded to use OpenMPI
|
||||
def install(self, spec, prefix):
|
||||
extra_args = []
|
||||
if '+mpi' in spec:
|
||||
extra_args.extend([
|
||||
"--enable-parallel",
|
||||
"CC=%s" % spec['mpi'].prefix.bin + "/mpicc",
|
||||
"CXX=%s" % spec['mpi'].prefix.bin + "/mpic++",
|
||||
])
|
||||
|
||||
configure(
|
||||
"--prefix=%s" % prefix,
|
||||
"--with-zlib=%s" % spec['zlib'].prefix,
|
||||
"--enable-shared",
|
||||
*extra_args)
|
||||
|
||||
make()
|
||||
make("install")
|
||||
|
||||
def url_for_version(self, version):
|
||||
v = str(version)
|
||||
|
||||
if version == Version("1.2.2"):
|
||||
return "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-" + v + ".tar.gz"
|
||||
elif version < Version("1.7"):
|
||||
return "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-" + version.up_to(2) + "/hdf5-" + v + ".tar.gz"
|
||||
else:
|
||||
return "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-" + v + "/src/hdf5-" + v + ".tar.gz"
|
||||
@@ -1,72 +0,0 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Written by David Beckingsale, david@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU General Public License (as published by
|
||||
# the Free Software Foundation) version 2.1 dated February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public License
|
||||
# along with this program; if not, write to the Free Software Foundation,
|
||||
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
from spack import *
|
||||
|
||||
|
||||
class Llvm(Package):
|
||||
"""The LLVM Project is a collection of modular and reusable compiler and
|
||||
toolchain technologies. Despite its name, LLVM has little to do with
|
||||
traditional virtual machines, though it does provide helpful libraries
|
||||
that can be used to build them. The name "LLVM" itself is not an acronym;
|
||||
it is the full name of the project.
|
||||
"""
|
||||
homepage = 'http://llvm.org/'
|
||||
url = 'http://llvm.org/releases/3.7.0/llvm-3.7.0.src.tar.xz'
|
||||
|
||||
version('3.7.0', 'b98b9495e5655a672d6cb83e1a180f8e', url='http://llvm.org/releases/3.7.0/llvm-3.7.0.src.tar.xz')
|
||||
version('3.6.2', '0c1ee3597d75280dee603bae9cbf5cc2', url='http://llvm.org/releases/3.6.2/llvm-3.6.2.src.tar.xz')
|
||||
version('3.5.1', '2d3d8004f38852aa679e5945b8ce0b14', url='http://llvm.org/releases/3.5.1/llvm-3.5.1.src.tar.xz')
|
||||
version('3.0', 'a8e5f5f1c1adebae7b4a654c376a6005', url='http://llvm.org/releases/3.0/llvm-3.0.tar.gz') # currently required by mesa package
|
||||
|
||||
depends_on('python@2.7:')
|
||||
|
||||
variant('libcxx', default=False, description="Builds the LLVM Standard C++ library targeting C++11")
|
||||
|
||||
##########
|
||||
# @3.7.0
|
||||
resource(name='compiler-rt',
|
||||
url='http://llvm.org/releases/3.7.0/compiler-rt-3.7.0.src.tar.xz', md5='383c10affd513026f08936b5525523f5',
|
||||
destination='projects', when='@3.7.0')
|
||||
resource(name='openmp',
|
||||
url='http://llvm.org/releases/3.7.0/openmp-3.7.0.src.tar.xz', md5='f482c86fdead50ba246a1a2b0bbf206f',
|
||||
destination='projects', when='@3.7.0')
|
||||
resource(name='libcxx',
|
||||
url='http://llvm.org/releases/3.7.0/libcxx-3.7.0.src.tar.xz', md5='46aa5175cbe1ad42d6e9c995968e56dd',
|
||||
destination='projects', placement='libcxx', when='+libcxx@3.7.0')
|
||||
resource(name='libcxxabi',
|
||||
url='http://llvm.org/releases/3.7.0/libcxxabi-3.7.0.src.tar.xz', md5='5aa769e2fca79fa5335cfae8f6258772',
|
||||
destination='projects', placement='libcxxabi', when='+libcxx@3.7.0')
|
||||
##########
|
||||
|
||||
def install(self, spec, prefix):
|
||||
env['CXXFLAGS'] = self.compiler.cxx11_flag
|
||||
|
||||
with working_dir('spack-build', create=True):
|
||||
cmake('..',
|
||||
'-DLLVM_REQUIRES_RTTI:BOOL=ON',
|
||||
'-DPYTHON_EXECUTABLE:PATH=%s/bin/python' % spec['python'].prefix,
|
||||
*std_cmake_args)
|
||||
make()
|
||||
make("install")
|
||||
@@ -1,27 +0,0 @@
|
||||
from spack import *
|
||||
|
||||
class Metis(Package):
|
||||
"""METIS is a set of serial programs for partitioning graphs,
|
||||
partitioning finite element meshes, and producing fill reducing
|
||||
orderings for sparse matrices. The algorithms implemented in
|
||||
METIS are based on the multilevel recursive-bisection,
|
||||
multilevel k-way, and multi-constraint partitioning schemes."""
|
||||
|
||||
homepage = "http://glaros.dtc.umn.edu/gkhome/metis/metis/overview"
|
||||
url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz"
|
||||
|
||||
version('5.1.0', '5465e67079419a69e0116de24fce58fe')
|
||||
|
||||
depends_on('mpi')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
cmake(".",
|
||||
'-DGKLIB_PATH=%s/GKlib' % pwd(),
|
||||
'-DSHARED=1',
|
||||
'-DCMAKE_C_COMPILER=mpicc',
|
||||
'-DCMAKE_CXX_COMPILER=mpicxx',
|
||||
'-DSHARED=1',
|
||||
*std_cmake_args)
|
||||
|
||||
make()
|
||||
make("install")
|
||||
@@ -1,25 +0,0 @@
|
||||
diff -Nur netcdf-4.3.3/CMakeLists.txt netcdf-4.3.3.mpi/CMakeLists.txt
|
||||
--- netcdf-4.3.3/CMakeLists.txt 2015-02-12 16:44:35.000000000 -0500
|
||||
+++ netcdf-4.3.3.mpi/CMakeLists.txt 2015-10-14 16:44:41.176300658 -0400
|
||||
@@ -753,6 +753,7 @@
|
||||
SET(USE_PARALLEL OFF CACHE BOOL "")
|
||||
MESSAGE(STATUS "Cannot find HDF5 library built with parallel support. Disabling parallel build.")
|
||||
ELSE()
|
||||
+ FIND_PACKAGE(MPI REQUIRED)
|
||||
SET(USE_PARALLEL ON CACHE BOOL "")
|
||||
SET(STATUS_PARALLEL "ON")
|
||||
ENDIF()
|
||||
diff -Nur netcdf-4.3.3/liblib/CMakeLists.txt netcdf-4.3.3.mpi/liblib/CMakeLists.txt
|
||||
--- netcdf-4.3.3/liblib/CMakeLists.txt 2015-02-12 16:44:35.000000000 -0500
|
||||
+++ netcdf-4.3.3.mpi/liblib/CMakeLists.txt 2015-10-14 16:44:57.757793634 -0400
|
||||
@@ -71,6 +71,10 @@
|
||||
SET(TLL_LIBS ${TLL_LIBS} ${CURL_LIBRARY})
|
||||
ENDIF()
|
||||
|
||||
+IF(USE_PARALLEL)
|
||||
+ SET(TLL_LIBS ${TLL_LIBS} ${MPI_C_LIBRARIES})
|
||||
+ENDIF()
|
||||
+
|
||||
IF(USE_HDF4)
|
||||
SET(TLL_LIBS ${TLL_LIBS} ${HDF4_LIBRARIES})
|
||||
ENDIF()
|
||||
@@ -1,27 +0,0 @@
|
||||
from spack import *
|
||||
|
||||
class Netcdf(Package):
|
||||
"""NetCDF is a set of software libraries and self-describing, machine-independent
|
||||
data formats that support the creation, access, and sharing of array-oriented
|
||||
scientific data."""
|
||||
|
||||
homepage = "http://www.unidata.ucar.edu/software/netcdf/"
|
||||
url = "ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-4.3.3.tar.gz"
|
||||
|
||||
version('4.3.3', '5fbd0e108a54bd82cb5702a73f56d2ae')
|
||||
|
||||
patch('netcdf-4.3.3-mpi.patch')
|
||||
|
||||
# Dependencies:
|
||||
# >HDF5
|
||||
depends_on("hdf5")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
with working_dir('spack-build', create=True):
|
||||
cmake('..',
|
||||
"-DCMAKE_INSTALL_PREFIX:PATH=%s" % prefix,
|
||||
"-DENABLE_DAP:BOOL=OFF", # Disable DAP.
|
||||
"-DBUILD_SHARED_LIBS:BOOL=OFF") # Don't build shared libraries (use static libs).
|
||||
|
||||
make()
|
||||
make("install")
|
||||
@@ -1,67 +0,0 @@
|
||||
# FIXME: Add copyright statement here
|
||||
|
||||
from spack import *
|
||||
from contextlib import closing
|
||||
|
||||
class Opari2(Package):
|
||||
"""OPARI2 is a source-to-source instrumentation tool for OpenMP and
|
||||
hybrid codes. It surrounds OpenMP directives and runtime library
|
||||
calls with calls to the POMP2 measurement interface.
|
||||
OPARI2 will provide you with a new initialization method that allows
|
||||
for multi-directory and parallel builds as well as the usage of
|
||||
pre-instrumented libraries. Furthermore, an efficient way of
|
||||
tracking parent-child relationships was added. Additionally, we
|
||||
extended OPARI2 to support instrumentation of OpenMP 3.0
|
||||
tied tasks. """
|
||||
|
||||
homepage = "http://www.vi-hps.org/projects/score-p"
|
||||
url = "http://www.vi-hps.org/upload/packages/opari2/opari2-1.1.2.tar.gz"
|
||||
|
||||
version('1.1.4', '245d3d11147a06de77909b0805f530c0',
|
||||
url='http://www.vi-hps.org/upload/packages/opari2/opari2-1.1.4.tar.gz')
|
||||
version('1.1.2', '9a262c7ca05ff0ab5f7775ae96f3539e')
|
||||
|
||||
backend_user_provided = """\
|
||||
CC=cc
|
||||
CXX=c++
|
||||
F77=f77
|
||||
FC=f90
|
||||
CFLAGS=-fPIC
|
||||
CXXFLAGS=-fPIC
|
||||
"""
|
||||
frontend_user_provided = """\
|
||||
CC_FOR_BUILD=cc
|
||||
CXX_FOR_BUILD=c++
|
||||
F77_FOR_BUILD=f70
|
||||
FC_FOR_BUILD=f90
|
||||
CFLAGS_FOR_BUILD=-fPIC
|
||||
CXXFLAGS_FOR_BUILD=-fPIC
|
||||
"""
|
||||
mpi_user_provided = """\
|
||||
MPICC=mpicc
|
||||
MPICXX=mpicxx
|
||||
MPIF77=mpif77
|
||||
MPIFC=mpif90
|
||||
MPI_CFLAGS=-fPIC
|
||||
MPI_CXXFLAGS=-fPIC
|
||||
"""
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# Use a custom compiler configuration, otherwise the score-p
|
||||
# build system messes with spack's compiler settings.
|
||||
# Create these three files in the build directory
|
||||
with closing(open("platform-backend-user-provided", "w")) as backend_file:
|
||||
backend_file.write(self.backend_user_provided)
|
||||
with closing(open("platform-frontend-user-provided", "w")) as frontend_file:
|
||||
frontend_file.write(self.frontend_user_provided)
|
||||
with closing(open("platform-mpi-user-provided", "w")) as mpi_file:
|
||||
mpi_file.write(self.mpi_user_provided)
|
||||
|
||||
# FIXME: Modify the configure line to suit your build system here.
|
||||
configure("--prefix=%s" % prefix,
|
||||
"--with-custom-compilers",
|
||||
"--enable-shared")
|
||||
|
||||
# FIXME: Add logic to build and install here
|
||||
make()
|
||||
make("install")
|
||||
@@ -1,78 +0,0 @@
|
||||
# FIXME: Add copyright
|
||||
|
||||
from spack import *
|
||||
from contextlib import closing
|
||||
import os
|
||||
|
||||
class Otf2(Package):
|
||||
"""The Open Trace Format 2 is a highly scalable, memory efficient event
|
||||
trace data format plus support library."""
|
||||
|
||||
homepage = "http://www.vi-hps.org/score-p"
|
||||
url = "http://www.vi-hps.org/upload/packages/otf2/otf2-1.4.tar.gz"
|
||||
|
||||
version('2.0', '5b546188b25bc1c4e285e06dddf75dfc',
|
||||
url="http://www.vi-hps.org/upload/packages/otf2/otf2-2.0.tar.gz")
|
||||
version('1.5.1', '16a9df46e0da78e374f5d12c8cdc1109',
|
||||
url='http://www.vi-hps.org/upload/packages/otf2/otf2-1.5.1.tar.gz')
|
||||
version('1.4', 'a23c42e936eb9209c4e08b61c3cf5092',
|
||||
url="http://www.vi-hps.org/upload/packages/otf2/otf2-1.4.tar.gz")
|
||||
version('1.3.1', 'd0ffc4e858455ace4f596f910e68c9f2',
|
||||
url="http://www.vi-hps.org/upload/packages/otf2/otf2-1.3.1.tar.gz")
|
||||
version('1.2.1', '8fb3e11fb7489896596ae2c7c83d7fc8',
|
||||
url="http://www.vi-hps.org/upload/packages/otf2/otf2-1.2.1.tar.gz")
|
||||
|
||||
backend_user_provided = """\
|
||||
CC=cc
|
||||
CXX=c++
|
||||
F77=f77
|
||||
FC=f90
|
||||
CFLAGS=-fPIC
|
||||
CXXFLAGS=-fPIC
|
||||
"""
|
||||
frontend_user_provided = """\
|
||||
CC_FOR_BUILD=cc
|
||||
CXX_FOR_BUILD=c++
|
||||
F77_FOR_BUILD=f70
|
||||
FC_FOR_BUILD=f90
|
||||
CFLAGS_FOR_BUILD=-fPIC
|
||||
CXXFLAGS_FOR_BUILD=-fPIC
|
||||
"""
|
||||
mpi_user_provided = """\
|
||||
MPICC=cc
|
||||
MPICXX=c++
|
||||
MPIF77=f77
|
||||
MPIFC=f90
|
||||
MPI_CFLAGS=-fPIC
|
||||
MPI_CXXFLAGS=-fPIC
|
||||
"""
|
||||
|
||||
@when('@:1.2.1')
|
||||
def version_specific_args(self):
|
||||
return ["--with-platform=disabled", "CC=cc", "CXX=c++", "F77=f77", "F90=f90", "CFLAGS=-fPIC", "CXXFLAGS=-fPIC"]
|
||||
|
||||
@when('@1.3:')
|
||||
def version_specific_args(self):
|
||||
# TODO: figure out what scorep's build does as of otf2 1.3
|
||||
return ["--with-custom-compilers"]
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# Use a custom compiler configuration, otherwise the score-p
|
||||
# build system messes with spack's compiler settings.
|
||||
# Create these three files in the build directory
|
||||
with closing(open("platform-backend-user-provided", "w")) as backend_file:
|
||||
backend_file.write(self.backend_user_provided)
|
||||
with closing(open("platform-frontend-user-provided", "w")) as frontend_file:
|
||||
frontend_file.write(self.frontend_user_provided)
|
||||
with closing(open("platform-mpi-user-provided", "w")) as mpi_file:
|
||||
mpi_file.write(self.mpi_user_provided)
|
||||
|
||||
configure_args=["--prefix=%s" % prefix,
|
||||
"--enable-shared"]
|
||||
|
||||
configure_args.extend(self.version_specific_args())
|
||||
|
||||
configure(*configure_args)
|
||||
|
||||
make()
|
||||
make("install")
|
||||
@@ -1,26 +0,0 @@
|
||||
from spack import *
|
||||
|
||||
class Parmetis(Package):
|
||||
"""ParMETIS is an MPI-based parallel library that implements a
|
||||
variety of algorithms for partitioning unstructured graphs,
|
||||
meshes, and for computing fill-reducing orderings of sparse
|
||||
matrices."""
|
||||
homepage = "http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview"
|
||||
url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/parmetis-4.0.3.tar.gz"
|
||||
|
||||
version('4.0.3', 'f69c479586bf6bb7aff6a9bc0c739628')
|
||||
|
||||
depends_on('mpi')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
cmake(".",
|
||||
'-DGKLIB_PATH=%s/metis/GKlib' % pwd(),
|
||||
'-DMETIS_PATH=%s/metis' % pwd(),
|
||||
'-DSHARED=1',
|
||||
'-DCMAKE_C_COMPILER=mpicc',
|
||||
'-DCMAKE_CXX_COMPILER=mpicxx',
|
||||
'-DSHARED=1',
|
||||
*std_cmake_args)
|
||||
|
||||
make()
|
||||
make("install")
|
||||
@@ -1,65 +0,0 @@
|
||||
# FIXME: Add copyright
|
||||
|
||||
from spack import *
|
||||
|
||||
class Scalasca(Package):
|
||||
"""Scalasca is a software tool that supports the performance optimization
|
||||
of parallel programs by measuring and analyzing their runtime behavior.
|
||||
The analysis identifies potential performance bottlenecks - in
|
||||
particular those concerning communication and synchronization - and
|
||||
offers guidance in exploring their causes."""
|
||||
|
||||
# FIXME: add a proper url for your package's homepage here.
|
||||
homepage = "http://www.scalasca.org"
|
||||
url = "http://apps.fz-juelich.de/scalasca/releases/scalasca/2.1/dist/scalasca-2.1.tar.gz"
|
||||
|
||||
version('2.1', 'bab9c2b021e51e2ba187feec442b96e6',
|
||||
url = 'http://apps.fz-juelich.de/scalasca/releases/scalasca/2.1/dist/scalasca-2.1.tar.gz' )
|
||||
|
||||
depends_on("mpi")
|
||||
depends_on("otf2@1.4")
|
||||
depends_on("cube@4.2.3")
|
||||
|
||||
backend_user_provided = """\
|
||||
CC=cc
|
||||
CXX=c++
|
||||
F77=f77
|
||||
FC=f90
|
||||
CFLAGS=-fPIC
|
||||
CXXFLAGS=-fPIC
|
||||
"""
|
||||
frontend_user_provided = """\
|
||||
CC_FOR_BUILD=cc
|
||||
CXX_FOR_BUILD=c++
|
||||
F77_FOR_BUILD=f70
|
||||
FC_FOR_BUILD=f90
|
||||
CFLAGS_FOR_BUILD=-fPIC
|
||||
CXXFLAGS_FOR_BUILD=-fPIC
|
||||
"""
|
||||
mpi_user_provided = """\
|
||||
MPICC=mpicc
|
||||
MPICXX=mpicxx
|
||||
MPIF77=mpif77
|
||||
MPIFC=mpif90
|
||||
MPI_CFLAGS=-fPIC
|
||||
MPI_CXXFLAGS=-fPIC
|
||||
"""
|
||||
|
||||
def install(self, spec, prefix):
|
||||
configure_args = ["--prefix=%s" % prefix,
|
||||
"--with-custom-compilers",
|
||||
"--with-otf2=%s" % spec['otf2'].prefix.bin,
|
||||
"--with-cube=%s" % spec['cube'].prefix.bin,
|
||||
"--enable-shared"]
|
||||
|
||||
configure(*configure_args)
|
||||
|
||||
make()
|
||||
make("install")
|
||||
|
||||
# FIXME: Modify the configure line to suit your build system here.
|
||||
configure("--prefix=%s" % prefix)
|
||||
|
||||
# FIXME: Add logic to build and install here
|
||||
make()
|
||||
make("install")
|
||||
2
var/spack/repos/builtin.mock/repo.yaml
Normal file
2
var/spack/repos/builtin.mock/repo.yaml
Normal file
@@ -0,0 +1,2 @@
|
||||
repo:
|
||||
namespace: builtin.mock
|
||||
49
var/spack/repos/builtin/packages/R/package.py
Normal file
49
var/spack/repos/builtin/packages/R/package.py
Normal file
@@ -0,0 +1,49 @@
|
||||
from spack import *
|
||||
|
||||
|
||||
class R(Package):
|
||||
"""
|
||||
R is 'GNU S', a freely available language and environment for statistical computing and graphics which provides a
|
||||
wide variety of statistical and graphical techniques: linear and nonlinear modelling, statistical tests, time series
|
||||
analysis, classification, clustering, etc. Please consult the R project homepage for further information.
|
||||
"""
|
||||
homepage = "https://www.r-project.org"
|
||||
url = "http://cran.cnr.berkeley.edu/src/base/R-3/R-3.1.2.tar.gz"
|
||||
|
||||
version('3.2.3', '1ba3dac113efab69e706902810cc2970')
|
||||
version('3.2.2', '57cef5c2e210a5454da1979562a10e5b')
|
||||
version('3.2.1', 'c2aac8b40f84e08e7f8c9068de9239a3')
|
||||
version('3.2.0', '66fa17ad457d7e618191aa0f52fc402e')
|
||||
version('3.1.3', '53a85b884925aa6b5811dfc361d73fc4')
|
||||
version('3.1.2', '3af29ec06704cbd08d4ba8d69250ae74')
|
||||
|
||||
variant('external-lapack', default=False, description='Links to externally installed BLAS/LAPACK')
|
||||
|
||||
# Virtual dependencies
|
||||
depends_on('blas', when='+external-lapack')
|
||||
depends_on('lapack', when='+external-lapack')
|
||||
|
||||
# Concrete dependencies
|
||||
depends_on('readline')
|
||||
depends_on('ncurses')
|
||||
depends_on('icu')
|
||||
depends_on('glib')
|
||||
depends_on('zlib')
|
||||
depends_on('libtiff')
|
||||
depends_on('jpeg')
|
||||
depends_on('cairo')
|
||||
depends_on('pango')
|
||||
depends_on('freetype')
|
||||
depends_on('tcl')
|
||||
depends_on('tk')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
options = ['--prefix=%s' % prefix,
|
||||
'--enable-R-shlib',
|
||||
'--enable-BLAS-shlib']
|
||||
if '+external-lapack' in spec:
|
||||
options.extend(['--with-blas', '--with-lapack'])
|
||||
|
||||
configure(*options)
|
||||
make()
|
||||
make('install')
|
||||
27
var/spack/repos/builtin/packages/SuiteSparse/package.py
Normal file
27
var/spack/repos/builtin/packages/SuiteSparse/package.py
Normal file
@@ -0,0 +1,27 @@
|
||||
from spack import *
|
||||
|
||||
|
||||
class Suitesparse(Package):
|
||||
"""
|
||||
SuiteSparse is a suite of sparse matrix algorithms
|
||||
"""
|
||||
homepage = 'http://faculty.cse.tamu.edu/davis/suitesparse.html'
|
||||
url = 'http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-4.5.1.tar.gz'
|
||||
|
||||
version('4.5.1', 'f0ea9aad8d2d1ffec66a5b6bfeff5319')
|
||||
|
||||
depends_on('blas')
|
||||
depends_on('lapack')
|
||||
|
||||
depends_on('metis@5.1.0', when='@4.5.1')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# The build system of SuiteSparse is quite old-fashioned
|
||||
# It's basically a plain Makefile which include an header (SuiteSparse_config/SuiteSparse_config.mk)
|
||||
# with a lot of convoluted logic in it.
|
||||
# Any kind of customization will need to go through filtering of that file
|
||||
|
||||
# FIXME : this actually uses the current workaround
|
||||
# FIXME : (blas / lapack always provide libblas and liblapack as aliases)
|
||||
make('install', 'INSTALL=%s' % prefix, 'BLAS=-lblas', 'LAPACK=-llapack')
|
||||
|
||||
57
var/spack/repos/builtin/packages/arpack-ng/package.py
Normal file
57
var/spack/repos/builtin/packages/arpack-ng/package.py
Normal file
@@ -0,0 +1,57 @@
|
||||
from spack import *
|
||||
|
||||
|
||||
class ArpackNg(Package):
|
||||
"""
|
||||
ARPACK-NG is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.
|
||||
|
||||
Important Features:
|
||||
|
||||
* Reverse Communication Interface.
|
||||
* Single and Double Precision Real Arithmetic Versions for Symmetric,
|
||||
Non-symmetric, Standard or Generalized Problems.
|
||||
* Single and Double Precision Complex Arithmetic Versions for Standard or
|
||||
Generalized Problems.
|
||||
* Routines for Banded Matrices - Standard or Generalized Problems.
|
||||
* Routines for The Singular Value Decomposition.
|
||||
* Example driver routines that may be used as templates to implement numerous
|
||||
Shift-Invert strategies for all problem types, data types and precision.
|
||||
|
||||
This project is a joint project between Debian, Octave and Scilab in order to
|
||||
provide a common and maintained version of arpack.
|
||||
|
||||
Indeed, no single release has been published by Rice university for the last
|
||||
few years and since many software (Octave, Scilab, R, Matlab...) forked it and
|
||||
implemented their own modifications, arpack-ng aims to tackle this by providing
|
||||
a common repository and maintained versions.
|
||||
|
||||
arpack-ng is replacing arpack almost everywhere.
|
||||
"""
|
||||
homepage = 'https://github.com/opencollab/arpack-ng'
|
||||
url = 'https://github.com/opencollab/arpack-ng/archive/3.3.0.tar.gz'
|
||||
|
||||
version('3.3.0', 'ed3648a23f0a868a43ef44c97a21bad5')
|
||||
|
||||
variant('shared', default=True, description='Enables the build of shared libraries')
|
||||
variant('mpi', default=False, description='Activates MPI support')
|
||||
|
||||
depends_on('blas')
|
||||
depends_on('lapack')
|
||||
depends_on('mpi', when='+mpi')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# Apparently autotools are not bootstrapped
|
||||
bootstrap = Executable('./bootstrap')
|
||||
|
||||
options = ['--prefix=%s' % prefix]
|
||||
|
||||
if '+mpi' in spec:
|
||||
options.append('--enable-mpi')
|
||||
|
||||
if '~shared' in spec:
|
||||
options.append('--enable-shared=no')
|
||||
|
||||
bootstrap()
|
||||
configure(*options)
|
||||
make()
|
||||
make('install')
|
||||
16
var/spack/repos/builtin/packages/atop/package.py
Normal file
16
var/spack/repos/builtin/packages/atop/package.py
Normal file
@@ -0,0 +1,16 @@
|
||||
from spack import *
|
||||
|
||||
class Atop(Package):
|
||||
"""Atop is an ASCII full-screen performance monitor for Linux"""
|
||||
homepage = "http://www.atoptool.nl/index.php"
|
||||
url = "http://www.atoptool.nl/download/atop-2.2-3.tar.gz"
|
||||
|
||||
version('2.2-3', '034dc1544f2ec4e4d2c739d320dc326d')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
make()
|
||||
mkdirp(prefix.bin)
|
||||
install("atop", join_path(prefix.bin, "atop"))
|
||||
mkdirp(join_path(prefix.man, "man1"))
|
||||
install(join_path("man", "atop.1"),
|
||||
join_path(prefix.man, "man1", "atop.1"))
|
||||
26
var/spack/repos/builtin/packages/binutils/cr16.patch
Normal file
26
var/spack/repos/builtin/packages/binutils/cr16.patch
Normal file
@@ -0,0 +1,26 @@
|
||||
--- old/opcodes/cr16-dis.c 2014-10-14 03:32:04.000000000 -0400
|
||||
+++ new/opcodes/cr16-dis.c 2016-01-14 21:54:26.000000000 -0500
|
||||
@@ -78,7 +78,7 @@
|
||||
REG_ARG_TYPE;
|
||||
|
||||
/* Current opcode table entry we're disassembling. */
|
||||
-const inst *instruction;
|
||||
+extern const inst *instruction;
|
||||
/* Current instruction we're disassembling. */
|
||||
ins cr16_currInsn;
|
||||
/* The current instruction is read into 3 consecutive words. */
|
||||
@@ -86,12 +86,12 @@
|
||||
/* Contains all words in appropriate order. */
|
||||
ULONGLONG cr16_allWords;
|
||||
/* Holds the current processed argument number. */
|
||||
-int processing_argument_number;
|
||||
+extern int processing_argument_number;
|
||||
/* Nonzero means a IMM4 instruction. */
|
||||
int imm4flag;
|
||||
/* Nonzero means the instruction's original size is
|
||||
incremented (escape sequence is used). */
|
||||
-int size_changed;
|
||||
+extern int size_changed;
|
||||
|
||||
|
||||
/* Print the constant expression length. */
|
||||
@@ -11,8 +11,11 @@ class Binutils(Package):
|
||||
|
||||
# Add a patch that creates binutils libiberty_pic.a which is preferred by OpenSpeedShop and cbtf-krell
|
||||
variant('krellpatch', default=False, description="build with openspeedshop based patch.")
|
||||
variant('gold', default=True, description="build the gold linker")
|
||||
patch('binutilskrell-2.24.patch', when='@2.24+krellpatch')
|
||||
|
||||
patch('cr16.patch')
|
||||
|
||||
variant('libiberty', default=False, description='Also install libiberty.')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
@@ -26,6 +29,9 @@ def install(self, spec, prefix):
|
||||
'--enable-targets=all',
|
||||
'--with-sysroot=/']
|
||||
|
||||
if '+gold' in spec:
|
||||
configure_args.append('--enable-gold')
|
||||
|
||||
if '+libiberty' in spec:
|
||||
configure_args.append('--enable-install-libiberty')
|
||||
|
||||
34
var/spack/repos/builtin/packages/boost/boost_11856.patch
Normal file
34
var/spack/repos/builtin/packages/boost/boost_11856.patch
Normal file
@@ -0,0 +1,34 @@
|
||||
--- a/libs/container/src/pool_resource.cpp 2015-11-06 12:49:55.000000000 -0800
|
||||
+++ b/libs/container/src/pool_resource.cpp 2015-12-22 07:54:36.202131121 -0800
|
||||
@@ -32,11 +32,11 @@
|
||||
class pool_data_t
|
||||
: public block_slist_base<>
|
||||
{
|
||||
- typedef block_slist_base<> block_slist_base;
|
||||
+ typedef block_slist_base<> block_slist_base_t;
|
||||
|
||||
public:
|
||||
explicit pool_data_t(std::size_t initial_blocks_per_chunk)
|
||||
- : block_slist_base(), next_blocks_per_chunk(initial_blocks_per_chunk)
|
||||
+ : block_slist_base_t(), next_blocks_per_chunk(initial_blocks_per_chunk)
|
||||
{ slist_algo::init_header(&free_slist); }
|
||||
|
||||
void *allocate_block() BOOST_NOEXCEPT
|
||||
@@ -59,7 +59,7 @@
|
||||
void release(memory_resource &upstream)
|
||||
{
|
||||
slist_algo::init_header(&free_slist);
|
||||
- this->block_slist_base::release(upstream);
|
||||
+ this->block_slist_base_t::release(upstream);
|
||||
next_blocks_per_chunk = pool_options_minimum_max_blocks_per_chunk;
|
||||
}
|
||||
|
||||
@@ -72,7 +72,7 @@
|
||||
|
||||
//Minimum block size is at least max_align, so all pools allocate sizes that are multiple of max_align,
|
||||
//meaning that all blocks are max_align-aligned.
|
||||
- char *p = static_cast<char *>(block_slist_base::allocate(blocks_per_chunk*pool_block, mr));
|
||||
+ char *p = static_cast<char *>(block_slist_base_t::allocate(blocks_per_chunk*pool_block, mr));
|
||||
|
||||
//Create header types. This is no-throw
|
||||
for(std::size_t i = 0, max = blocks_per_chunk; i != max; ++i){
|
||||
210
var/spack/repos/builtin/packages/boost/package.py
Normal file
210
var/spack/repos/builtin/packages/boost/package.py
Normal file
@@ -0,0 +1,210 @@
|
||||
from spack import *
|
||||
import spack
|
||||
|
||||
class Boost(Package):
|
||||
"""Boost provides free peer-reviewed portable C++ source
|
||||
libraries, emphasizing libraries that work well with the C++
|
||||
Standard Library.
|
||||
|
||||
Boost libraries are intended to be widely useful, and usable
|
||||
across a broad spectrum of applications. The Boost license
|
||||
encourages both commercial and non-commercial use.
|
||||
"""
|
||||
homepage = "http://www.boost.org"
|
||||
url = "http://downloads.sourceforge.net/project/boost/boost/1.55.0/boost_1_55_0.tar.bz2"
|
||||
list_url = "http://sourceforge.net/projects/boost/files/boost/"
|
||||
list_depth = 2
|
||||
|
||||
version('1.60.0', '65a840e1a0b13a558ff19eeb2c4f0cbe')
|
||||
version('1.59.0', '6aa9a5c6a4ca1016edd0ed1178e3cb87')
|
||||
version('1.58.0', 'b8839650e61e9c1c0a89f371dd475546')
|
||||
version('1.57.0', '1be49befbdd9a5ce9def2983ba3e7b76')
|
||||
version('1.56.0', 'a744cf167b05d72335f27c88115f211d')
|
||||
version('1.55.0', 'd6eef4b4cacb2183f2bf265a5a03a354')
|
||||
version('1.54.0', '15cb8c0803064faef0c4ddf5bc5ca279')
|
||||
version('1.53.0', 'a00d22605d5dbcfb4c9936a9b35bc4c2')
|
||||
version('1.52.0', '3a855e0f919107e0ca4de4d84ad3f750')
|
||||
version('1.51.0', '4b6bd483b692fd138aef84ed2c8eb679')
|
||||
version('1.50.0', '52dd00be775e689f55a987baebccc462')
|
||||
version('1.49.0', '0d202cb811f934282dea64856a175698')
|
||||
version('1.48.0', 'd1e9a7a7f532bb031a3c175d86688d95')
|
||||
version('1.47.0', 'a2dc343f7bc7f83f8941e47ed4a18200')
|
||||
version('1.46.1', '7375679575f4c8db605d426fc721d506')
|
||||
version('1.46.0', '37b12f1702319b73876b0097982087e0')
|
||||
version('1.45.0', 'd405c606354789d0426bc07bea617e58')
|
||||
version('1.44.0', 'f02578f5218f217a9f20e9c30e119c6a')
|
||||
version('1.43.0', 'dd49767bfb726b0c774f7db0cef91ed1')
|
||||
version('1.42.0', '7bf3b4eb841b62ffb0ade2b82218ebe6')
|
||||
version('1.41.0', '8bb65e133907db727a2a825c5400d0a6')
|
||||
version('1.40.0', 'ec3875caeac8c52c7c129802a8483bd7')
|
||||
version('1.39.0', 'a17281fd88c48e0d866e1a12deecbcc0')
|
||||
version('1.38.0', '5eca2116d39d61382b8f8235915cb267')
|
||||
version('1.37.0', '8d9f990bfb7e83769fa5f1d6f065bc92')
|
||||
version('1.36.0', '328bfec66c312150e4c2a78dcecb504b')
|
||||
version('1.35.0', 'dce952a7214e72d6597516bcac84048b')
|
||||
version('1.34.1', '2d938467e8a448a2c9763e0a9f8ca7e5')
|
||||
version('1.34.0', 'ed5b9291ffad776f8757a916e1726ad0')
|
||||
|
||||
default_install_libs = set(['atomic',
|
||||
'chrono',
|
||||
'date_time',
|
||||
'filesystem',
|
||||
'graph',
|
||||
'iostreams',
|
||||
'locale',
|
||||
'log',
|
||||
'math',
|
||||
'program_options',
|
||||
'random',
|
||||
'regex',
|
||||
'serialization',
|
||||
'signals',
|
||||
'system',
|
||||
'test',
|
||||
'thread',
|
||||
'wave'])
|
||||
|
||||
# mpi/python are not installed by default because they pull in many
|
||||
# dependencies and/or because there is a great deal of customization
|
||||
# possible (and it would be difficult to choose sensible defaults)
|
||||
default_noinstall_libs = set(['mpi', 'python'])
|
||||
|
||||
all_libs = default_install_libs | default_noinstall_libs
|
||||
|
||||
for lib in all_libs:
|
||||
variant(lib, default=(lib not in default_noinstall_libs),
|
||||
description="Compile with {0} library".format(lib))
|
||||
|
||||
variant('debug', default=False, description='Switch to the debug version of Boost')
|
||||
variant('shared', default=True, description="Additionally build shared libraries")
|
||||
variant('multithreaded', default=True, description="Build multi-threaded versions of libraries")
|
||||
variant('singlethreaded', default=True, description="Build single-threaded versions of libraries")
|
||||
variant('icu_support', default=False, description="Include ICU support (for regex/locale libraries)")
|
||||
|
||||
depends_on('icu', when='+icu_support')
|
||||
depends_on('python', when='+python')
|
||||
depends_on('mpi', when='+mpi')
|
||||
depends_on('bzip2', when='+iostreams')
|
||||
depends_on('zlib', when='+iostreams')
|
||||
|
||||
# Patch fix from https://svn.boost.org/trac/boost/ticket/11856
|
||||
patch('boost_11856.patch', when='@1.60.0%gcc@4.4.7')
|
||||
|
||||
def url_for_version(self, version):
|
||||
"""Handle Boost's weird URLs, which write the version two different ways."""
|
||||
parts = [str(p) for p in Version(version)]
|
||||
dots = ".".join(parts)
|
||||
underscores = "_".join(parts)
|
||||
return "http://downloads.sourceforge.net/project/boost/boost/%s/boost_%s.tar.bz2" % (
|
||||
dots, underscores)
|
||||
|
||||
def determine_toolset(self, spec):
|
||||
if spec.satisfies("=darwin-x86_64"):
|
||||
return 'darwin'
|
||||
|
||||
toolsets = {'g++': 'gcc',
|
||||
'icpc': 'intel',
|
||||
'clang++': 'clang'}
|
||||
|
||||
for cc, toolset in toolsets.iteritems():
|
||||
if cc in self.compiler.cxx_names:
|
||||
return toolset
|
||||
|
||||
# fallback to gcc if no toolset found
|
||||
return 'gcc'
|
||||
|
||||
def determine_bootstrap_options(self, spec, withLibs, options):
|
||||
boostToolsetId = self.determine_toolset(spec)
|
||||
options.append('--with-toolset=%s' % boostToolsetId)
|
||||
options.append("--with-libraries=%s" % ','.join(withLibs))
|
||||
|
||||
if '+python' in spec:
|
||||
options.append('--with-python=%s' %
|
||||
join_path(spec['python'].prefix.bin, 'python'))
|
||||
|
||||
with open('user-config.jam', 'w') as f:
|
||||
compiler_wrapper = join_path(spack.build_env_path, 'c++')
|
||||
f.write("using {0} : : {1} ;\n".format(boostToolsetId,
|
||||
compiler_wrapper))
|
||||
|
||||
if '+mpi' in spec:
|
||||
f.write('using mpi : %s ;\n' %
|
||||
join_path(spec['mpi'].prefix.bin, 'mpicxx'))
|
||||
if '+python' in spec:
|
||||
f.write('using python : %s : %s ;\n' %
|
||||
(spec['python'].version,
|
||||
join_path(spec['python'].prefix.bin, 'python')))
|
||||
|
||||
def determine_b2_options(self, spec, options):
|
||||
if '+debug' in spec:
|
||||
options.append('variant=debug')
|
||||
else:
|
||||
options.append('variant=release')
|
||||
|
||||
if '+icu_support' in spec:
|
||||
options.extend(['-s', 'ICU_PATH=%s' % spec['icu'].prefix])
|
||||
|
||||
if '+iostreams' in spec:
|
||||
options.extend([
|
||||
'-s', 'BZIP2_INCLUDE=%s' % spec['bzip2'].prefix.include,
|
||||
'-s', 'BZIP2_LIBPATH=%s' % spec['bzip2'].prefix.lib,
|
||||
'-s', 'ZLIB_INCLUDE=%s' % spec['zlib'].prefix.include,
|
||||
'-s', 'ZLIB_LIBPATH=%s' % spec['zlib'].prefix.lib,
|
||||
])
|
||||
|
||||
linkTypes = ['static']
|
||||
if '+shared' in spec:
|
||||
linkTypes.append('shared')
|
||||
|
||||
threadingOpts = []
|
||||
if '+multithreaded' in spec:
|
||||
threadingOpts.append('multi')
|
||||
if '+singlethreaded' in spec:
|
||||
threadingOpts.append('single')
|
||||
if not threadingOpts:
|
||||
raise RuntimeError("At least one of {singlethreaded, multithreaded} must be enabled")
|
||||
|
||||
options.extend([
|
||||
'toolset=%s' % self.determine_toolset(spec),
|
||||
'link=%s' % ','.join(linkTypes),
|
||||
'--layout=tagged'])
|
||||
|
||||
return threadingOpts
|
||||
|
||||
def install(self, spec, prefix):
|
||||
withLibs = list()
|
||||
for lib in Boost.all_libs:
|
||||
if "+{0}".format(lib) in spec:
|
||||
withLibs.append(lib)
|
||||
if not withLibs:
|
||||
# if no libraries are specified for compilation, then you dont have
|
||||
# to configure/build anything, just copy over to the prefix directory.
|
||||
src = join_path(self.stage.source_path, 'boost')
|
||||
mkdirp(join_path(prefix, 'include'))
|
||||
dst = join_path(prefix, 'include', 'boost')
|
||||
install_tree(src, dst)
|
||||
return
|
||||
|
||||
# to make Boost find the user-config.jam
|
||||
env['BOOST_BUILD_PATH'] = './'
|
||||
|
||||
bootstrap = Executable('./bootstrap.sh')
|
||||
|
||||
bootstrap_options = ['--prefix=%s' % prefix]
|
||||
self.determine_bootstrap_options(spec, withLibs, bootstrap_options)
|
||||
|
||||
bootstrap(*bootstrap_options)
|
||||
|
||||
# b2 used to be called bjam, before 1.47 (sigh)
|
||||
b2name = './b2' if spec.satisfies('@1.47:') else './bjam'
|
||||
|
||||
b2 = Executable(b2name)
|
||||
b2_options = ['-j', '%s' % make_jobs]
|
||||
|
||||
threadingOpts = self.determine_b2_options(spec, b2_options)
|
||||
|
||||
# In theory it could be done on one call but it fails on
|
||||
# Boost.MPI if the threading options are not separated.
|
||||
for threadingOpt in threadingOpts:
|
||||
b2('install', 'threading=%s' % threadingOpt, *b2_options)
|
||||
|
||||
@@ -14,6 +14,7 @@ class Cairo(Package):
|
||||
|
||||
def install(self, spec, prefix):
|
||||
configure("--prefix=%s" % prefix,
|
||||
"--disable-trace", # can cause problems with libiberty
|
||||
"--enable-tee")
|
||||
make()
|
||||
make("install")
|
||||
25
var/spack/repos/builtin/packages/caliper/package.py
Normal file
25
var/spack/repos/builtin/packages/caliper/package.py
Normal file
@@ -0,0 +1,25 @@
|
||||
from spack import *
|
||||
|
||||
class Caliper(Package):
|
||||
"""
|
||||
Caliper is a generic context annotation system. It gives programmers the
|
||||
ability to provide arbitrary program context information to (performance)
|
||||
tools at runtime.
|
||||
"""
|
||||
|
||||
homepage = "https://github.com/LLNL/Caliper"
|
||||
url = ""
|
||||
|
||||
version('master', git='ssh://git@github.com:LLNL/Caliper.git')
|
||||
|
||||
variant('mpi', default=False, description='Enable MPI function wrappers.')
|
||||
|
||||
depends_on('libunwind')
|
||||
depends_on('papi')
|
||||
depends_on('mpi', when='+mpi')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
with working_dir('build', create=True):
|
||||
cmake('..', *std_cmake_args)
|
||||
make()
|
||||
make("install")
|
||||
33
var/spack/repos/builtin/packages/cereal/Werror.patch
Normal file
33
var/spack/repos/builtin/packages/cereal/Werror.patch
Normal file
@@ -0,0 +1,33 @@
|
||||
--- old/sandbox/CMakeLists.txt
|
||||
+++ new/sandbox/CMakeLists.txt
|
||||
@@ -4,9 +4,11 @@
|
||||
add_executable(sandbox_json sandbox_json.cpp)
|
||||
add_executable(sandbox_rtti sandbox_rtti.cpp)
|
||||
|
||||
+if(Boost_FOUND)
|
||||
add_executable(sandbox_vs sandbox_vs.cpp)
|
||||
target_link_libraries(sandbox_vs sandbox_vs_dll)
|
||||
include_directories(sandbox_shared_lib)
|
||||
+endif(Boost_FOUND)
|
||||
|
||||
if(Boost_FOUND)
|
||||
add_executable(performance performance.cpp)
|
||||
--- old/include/cereal/types/common.hpp
|
||||
+++ new/include/cereal/types/common.hpp
|
||||
@@ -106,14 +106,16 @@
|
||||
t = reinterpret_cast<typename common_detail::is_enum<T>::type const &>( value );
|
||||
}
|
||||
|
||||
+#ifndef CEREAL_ENABLE_RAW_POINTER_SERIALIZATION
|
||||
//! Serialization for raw pointers
|
||||
/*! This exists only to throw a static_assert to let users know we don't support raw pointers. */
|
||||
template <class Archive, class T> inline
|
||||
void CEREAL_SERIALIZE_FUNCTION_NAME( Archive &, T * & )
|
||||
{
|
||||
static_assert(cereal::traits::detail::delay_static_assert<T>::value,
|
||||
"Cereal does not support serializing raw pointers - please use a smart pointer");
|
||||
}
|
||||
+#endif
|
||||
|
||||
//! Serialization for C style arrays
|
||||
template <class Archive, class T> inline
|
||||
34
var/spack/repos/builtin/packages/cereal/package.py
Normal file
34
var/spack/repos/builtin/packages/cereal/package.py
Normal file
@@ -0,0 +1,34 @@
|
||||
from spack import *
|
||||
import shutil
|
||||
|
||||
class Cereal(Package):
|
||||
"""cereal is a header-only C++11 serialization library. cereal takes arbitrary data types and reversibly turns them into different representations, such as compact binary encodings, XML, or JSON. cereal was designed to be fast, light-weight, and easy to extend - it has no external dependencies and can be easily bundled with other code or used standalone."""
|
||||
homepage = "http://uscilab.github.io/cereal/"
|
||||
url = "https://github.com/USCiLab/cereal/archive/v1.1.2.tar.gz"
|
||||
|
||||
version('1.1.2', '34d4ad174acbff005c36d4d10e48cbb9')
|
||||
version('1.1.1', '0ceff308c38f37d5b5f6df3927451c27')
|
||||
version('1.1.0', '9f2d5f72e935c54f4c6d23e954ce699f')
|
||||
version('1.0.0', 'd1bacca70a95cec0ddbff68b0871296b')
|
||||
version('0.9.1', '8872d4444ff274ce6cd1ed364d0fc0ad')
|
||||
|
||||
patch("Werror.patch")
|
||||
|
||||
depends_on("cmake @2.6.2:")
|
||||
|
||||
def install(self, spec, prefix):
|
||||
# Don't use -Werror
|
||||
filter_file(r'-Werror', '', 'CMakeLists.txt')
|
||||
|
||||
# configure
|
||||
# Boost is only used for self-tests, which we are not running (yet?)
|
||||
cmake('.', '-DCMAKE_DISABLE_FIND_PACKAGE_Boost=TRUE', *std_cmake_args)
|
||||
|
||||
# Build
|
||||
make()
|
||||
|
||||
# Install
|
||||
shutil.rmtree(join_path(prefix, 'doc'), ignore_errors=True)
|
||||
shutil.rmtree(join_path(prefix, 'include'), ignore_errors=True)
|
||||
shutil.copytree('doc', join_path(prefix, 'doc'), symlinks=True)
|
||||
shutil.copytree('include', join_path(prefix, 'include'), symlinks=True)
|
||||
73
var/spack/repos/builtin/packages/cgal/package.py
Normal file
73
var/spack/repos/builtin/packages/cgal/package.py
Normal file
@@ -0,0 +1,73 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU General Public License (as published by
|
||||
# the Free Software Foundation) version 2.1 dated February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public License
|
||||
# along with this program; if not, write to the Free Software Foundation,
|
||||
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Cgal(Package):
|
||||
"""
|
||||
CGAL is a software project that provides easy access to efficient and reliable geometric algorithms in the form of
|
||||
a C++ library. CGAL is used in various areas needing geometric computation, such as geographic information systems,
|
||||
computer aided design, molecular biology, medical imaging, computer graphics, and robotics.
|
||||
"""
|
||||
homepage = 'http://www.cgal.org/'
|
||||
url = 'https://github.com/CGAL/cgal/archive/releases/CGAL-4.7.tar.gz'
|
||||
|
||||
version('4.7', '4826714810f3b4c65cac96b90fb03b67')
|
||||
version('4.6.3', 'e8ee2ecc8d2b09b94a121c09257b576d')
|
||||
|
||||
# Installation instructions : http://doc.cgal.org/latest/Manual/installation.html
|
||||
variant('shared', default=True, description='Enables the build of shared libraries')
|
||||
variant('debug', default=False, description='Builds a debug version of the libraries')
|
||||
|
||||
depends_on('boost')
|
||||
depends_on('mpfr')
|
||||
depends_on('gmp')
|
||||
depends_on('zlib')
|
||||
|
||||
# FIXME : Qt5 dependency missing (needs Qt5 and OpenGL)
|
||||
# FIXME : Optional third party libraries missing
|
||||
|
||||
def install(self, spec, prefix):
|
||||
|
||||
options = []
|
||||
options.extend(std_cmake_args)
|
||||
# CGAL supports only Release and Debug build type. Any other build type will raise an error at configure time
|
||||
if '+debug' in spec:
|
||||
options.append('-DCMAKE_BUILD_TYPE:STRING=Debug')
|
||||
else:
|
||||
options.append('-DCMAKE_BUILD_TYPE:STRING=Release')
|
||||
|
||||
if '+shared' in spec:
|
||||
options.append('-DBUILD_SHARED_LIBS:BOOL=ON')
|
||||
else:
|
||||
options.append('-DBUILD_SHARED_LIBS:BOOL=OFF')
|
||||
|
||||
build_directory = join_path(self.stage.path, 'spack-build')
|
||||
source_directory = self.stage.source_path
|
||||
with working_dir(build_directory, create=True):
|
||||
cmake(source_directory, *options)
|
||||
make()
|
||||
make("install")
|
||||
@@ -28,18 +28,21 @@ class Cmake(Package):
|
||||
"""A cross-platform, open-source build system. CMake is a family of
|
||||
tools designed to build, test and package software."""
|
||||
homepage = 'https://www.cmake.org'
|
||||
url = 'https://cmake.org/files/v3.4/cmake-3.4.3.tar.gz'
|
||||
|
||||
version('2.8.10.2', '097278785da7182ec0aea8769d06860c',
|
||||
url = 'http://www.cmake.org/files/v2.8/cmake-2.8.10.2.tar.gz')
|
||||
|
||||
version('3.0.2', 'db4c687a31444a929d2fdc36c4dfb95f',
|
||||
url = 'http://www.cmake.org/files/v3.0/cmake-3.0.2.tar.gz')
|
||||
|
||||
version('3.4.0', 'cd3034e0a44256a0917e254167217fc8',
|
||||
url = 'https://cmake.org/files/v3.4/cmake-3.4.0.tar.gz')
|
||||
version('3.4.3', '4cb3ff35b2472aae70f542116d616e63')
|
||||
version('3.4.0', 'cd3034e0a44256a0917e254167217fc8')
|
||||
version('3.3.1', '52638576f4e1e621fed6c3410d3a1b12')
|
||||
version('3.0.2', 'db4c687a31444a929d2fdc36c4dfb95f')
|
||||
version('2.8.10.2', '097278785da7182ec0aea8769d06860c')
|
||||
|
||||
variant('ncurses', default=True, description='Enables the build of the ncurses gui')
|
||||
depends_on('ncurses', when='+ncurses')
|
||||
|
||||
def url_for_version(self, version):
|
||||
"""Handle CMake's version-based custom URLs."""
|
||||
return 'https://cmake.org/files/v%s/cmake-%s.tar.gz' % (version.up_to(2), version)
|
||||
|
||||
# version('3.0.1', 'e2e05d84cb44a42f1371d9995631dcf5')
|
||||
# version('3.0.0', '21a1c85e1a3b803c4b48e7ff915a863e')
|
||||
|
||||
def install(self, spec, prefix):
|
||||
configure('--prefix=' + prefix,
|
||||
16
var/spack/repos/builtin/packages/cmocka/package.py
Normal file
16
var/spack/repos/builtin/packages/cmocka/package.py
Normal file
@@ -0,0 +1,16 @@
|
||||
from spack import *
|
||||
|
||||
class Cmocka(Package):
|
||||
"""Unit-testing framework in pure C"""
|
||||
homepage = "https://cmocka.org/"
|
||||
url = "https://cmocka.org/files/1.0/cmocka-1.0.1.tar.xz"
|
||||
|
||||
version('1.0.1', 'ed861e501a21a92b2af63e466df2015e')
|
||||
parallel = False
|
||||
|
||||
def install(self, spec, prefix):
|
||||
with working_dir('spack-build', create=True):
|
||||
cmake('..', *std_cmake_args)
|
||||
|
||||
make()
|
||||
make("install")
|
||||
55
var/spack/repos/builtin/packages/cube/package.py
Normal file
55
var/spack/repos/builtin/packages/cube/package.py
Normal file
@@ -0,0 +1,55 @@
|
||||
##############################################################################
|
||||
# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
|
||||
# Produced at the Lawrence Livermore National Laboratory.
|
||||
#
|
||||
# This file is part of Spack.
|
||||
# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
|
||||
# LLNL-CODE-647188
|
||||
#
|
||||
# For details, see https://github.com/llnl/spack
|
||||
# Please also see the LICENSE file for our notice and the LGPL.
|
||||
#
|
||||
# This program is free software; you can redistribute it and/or modify
|
||||
# it under the terms of the GNU General Public License (as published by
|
||||
# the Free Software Foundation) version 2.1 dated February 1999.
|
||||
#
|
||||
# This program is distributed in the hope that it will be useful, but
|
||||
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
|
||||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
|
||||
# conditions of the GNU General Public License for more details.
|
||||
#
|
||||
# You should have received a copy of the GNU Lesser General Public License
|
||||
# along with this program; if not, write to the Free Software Foundation,
|
||||
# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
||||
##############################################################################
|
||||
|
||||
from spack import *
|
||||
|
||||
|
||||
class Cube(Package):
|
||||
"""
|
||||
Cube the profile viewer for Score-P and Scalasca profiles. It displays a multi-dimensional performance space
|
||||
consisting of the dimensions:
|
||||
- performance metric
|
||||
- call path
|
||||
- system resource
|
||||
"""
|
||||
|
||||
homepage = "http://www.scalasca.org/software/cube-4.x/download.html"
|
||||
url = "http://apps.fz-juelich.de/scalasca/releases/cube/4.2/dist/cube-4.2.3.tar.gz"
|
||||
|
||||
version('4.3.3', '07e109248ed8ffc7bdcce614264a2909',
|
||||
url='http://apps.fz-juelich.de/scalasca/releases/cube/4.3/dist/cube-4.3.3.tar.gz')
|
||||
|
||||
version('4.2.3', '8f95b9531f5a8f8134f279c2767c9b20',
|
||||
url="http://apps.fz-juelich.de/scalasca/releases/cube/4.2/dist/cube-4.2.3.tar.gz")
|
||||
|
||||
# TODO : add variant that builds GUI on top of Qt
|
||||
|
||||
def install(self, spec, prefix):
|
||||
configure_args = ["--prefix=%s" % prefix,
|
||||
"--without-paraver",
|
||||
"--without-gui"]
|
||||
configure(*configure_args)
|
||||
make(parallel=False)
|
||||
make("install", parallel=False)
|
||||
55
var/spack/repos/builtin/packages/dakota/package.py
Normal file
55
var/spack/repos/builtin/packages/dakota/package.py
Normal file
@@ -0,0 +1,55 @@
|
||||
from spack import *
|
||||
|
||||
|
||||
class Dakota(Package):
|
||||
"""
|
||||
The Dakota toolkit provides a flexible, extensible interface between analysis codes and iterative systems
|
||||
analysis methods. Dakota contains algorithms for:
|
||||
|
||||
- optimization with gradient and non gradient-based methods;
|
||||
- uncertainty quantification with sampling, reliability, stochastic expansion, and epistemic methods;
|
||||
- parameter estimation with nonlinear least squares methods;
|
||||
- sensitivity/variance analysis with design of experiments and parameter study methods.
|
||||
|
||||
These capabilities may be used on their own or as components within advanced strategies such as hybrid optimization,
|
||||
surrogate-based optimization, mixed integer nonlinear programming, or optimization under uncertainty.
|
||||
"""
|
||||
|
||||
homepage = 'https://dakota.sandia.gov/'
|
||||
url = 'https://dakota.sandia.gov/sites/default/files/distributions/public/dakota-6.3-public.src.tar.gz'
|
||||
_url_str = 'https://dakota.sandia.gov/sites/default/files/distributions/public/dakota-{version}-public.src.tar.gz'
|
||||
|
||||
version('6.3', '05a58d209fae604af234c894c3f73f6d')
|
||||
|
||||
variant('debug', default=False, description='Builds a debug version of the libraries')
|
||||
variant('shared', default=True, description='Enables the build of shared libraries')
|
||||
variant('mpi', default=True, description='Activates MPI support')
|
||||
|
||||
depends_on('blas')
|
||||
depends_on('lapack')
|
||||
depends_on('mpi', when='+mpi')
|
||||
|
||||
depends_on('python')
|
||||
depends_on('boost')
|
||||
|
||||
def url_for_version(self, version):
|
||||
return Dakota._url_str.format(version=version)
|
||||
|
||||
def install(self, spec, prefix):
|
||||
options = []
|
||||
options.extend(std_cmake_args)
|
||||
|
||||
options.extend(['-DCMAKE_BUILD_TYPE:STRING=%s' % ('Debug' if '+debug' in spec else 'Release'),
|
||||
'-DBUILD_SHARED_LIBS:BOOL=%s' % ('ON' if '+shared' in spec else 'OFF')])
|
||||
|
||||
if '+mpi' in spec:
|
||||
options.extend(['-DDAKOTA_HAVE_MPI:BOOL=ON',
|
||||
'-DMPI_CXX_COMPILER:STRING=%s' % join_path(spec['mpi'].prefix.bin, 'mpicxx')])
|
||||
|
||||
build_directory = join_path(self.stage.path, 'spack-build')
|
||||
source_directory = self.stage.source_path
|
||||
|
||||
with working_dir(build_directory, create=True):
|
||||
cmake(source_directory, *options)
|
||||
make()
|
||||
make("install")
|
||||
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user