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py-bidscoin, py-multiecho: add new packages (#34168)

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Manuela Kuhn 2022-11-30 01:37:50 +01:00 committed by GitHub
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commit ef06b9db5b
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var/spack/repos/builtin/packages/py-bidscoin/package.py Normal file
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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class PyBidscoin(PythonPackage):
"""Converts and organises raw MRI data-sets according to the Brain Imaging
Data Structure (BIDS)."""
homepage = "https://github.com/Donders-Institute/bidscoin"
pypi = "bidscoin/bidscoin-3.7.4.tar.gz"
version("3.7.4", sha256="efa32238fb7b75e533e7f5cc318ad5a703716d291985435d43f1de4f18402517")
depends_on("python@3.8:", type=("build", "run"))
depends_on("py-setuptools", type="build")
depends_on("py-pytest-runner", type="build")
depends_on("py-pandas", type=("build", "run"))
depends_on("py-matplotlib", type=("build", "run"))
depends_on("py-numpy", type=("build", "run"))
depends_on("py-pydicom@2:", type=("build", "run"))
depends_on("py-pyqt5@5.12.1:", type=("build", "run"))
depends_on("py-ruamel-yaml@0.15.35:", type=("build", "run"))
depends_on("py-coloredlogs", type=("build", "run"))
depends_on("py-tqdm", type=("build", "run"))
depends_on("py-multiecho@0.25:", type=("build", "run"))
depends_on("py-python-dateutil", type=("build", "run"))
depends_on("py-nibabel", type=("build", "run"))
depends_on("dcm2niix", type=("build", "run"))

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var/spack/repos/builtin/packages/py-multiecho/package.py Normal file
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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class PyMultiecho(PythonPackage):
"""Combine multi-echoes from a multi-echo fMRI acquisition."""
homepage = "https://github.com/Donders-Institute/multiecho"
pypi = "multiecho/multiecho-0.28.tar.gz"
version("0.28", sha256="d0459bd03398547116d8e989b2d2b7922af0ae7ae77e233794dd7253a2abced3")
depends_on("python@3.6:3.9", type=("build", "run"))
depends_on("py-setuptools", type="build")
depends_on("py-coloredlogs", type=("build", "run"))
depends_on("py-numpy", type=("build", "run"))
depends_on("py-nibabel", type=("build", "run"))