Convert encoding of script in interproscan (#14356)
One of the perl scripts was encoded with ISO-8859-1, which caused the sbang replacement process to fail when spack uses python3. This PR converts the ps_scan script to UTF-8 encoding.
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@ -42,6 +42,7 @@ class Interproscan(Package):
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patch('large-gid.patch', when='@5:')
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patch('large-gid.patch', when='@5:')
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patch('non-interactive.patch', when='@:4.8')
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patch('non-interactive.patch', when='@:4.8')
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patch('ps_scan.patch', when='@:4.8')
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def install(self, spec, prefix):
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def install(self, spec, prefix):
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with working_dir('core'):
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with working_dir('core'):
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12
var/spack/repos/builtin/packages/interproscan/ps_scan.patch
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12
var/spack/repos/builtin/packages/interproscan/ps_scan.patch
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@ -0,0 +1,12 @@
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diff -ru a/bin/ps_scan.pl b/bin/ps_scan.pl
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--- a/bin/ps_scan.pl 2020-01-01 14:07:54.243869822 -0600
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+++ b/bin/ps_scan.pl 2020-01-01 14:08:03.786850313 -0600
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@@ -8,7 +8,7 @@
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# Authors:
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# Alexandre Gattiker
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# Edouard de Castro; E-mail: ecastro@isb-sib.ch
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-# Béatrice Cuche (evaluated_by post-processing)
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+# Béatrice Cuche (evaluated_by post-processing)
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#
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# Contributions:
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# Lorenza Bordoli (repeat method)
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