From ff031de800080a4c563022b6f28c9b0ea38d9694 Mon Sep 17 00:00:00 2001 From: George Hartzell Date: Wed, 25 Oct 2017 03:20:42 -0700 Subject: [PATCH] Add old version to bcftools (#5907) * bcftools v1.2 and htslib v1.2 * dependency change - only require dependencies for v1.2 --- var/spack/repos/builtin/packages/bcftools/package.py | 2 ++ var/spack/repos/builtin/packages/htslib/package.py | 7 +++++++ 2 files changed, 9 insertions(+) diff --git a/var/spack/repos/builtin/packages/bcftools/package.py b/var/spack/repos/builtin/packages/bcftools/package.py index cbc33b1004c..bcc7e0e8083 100644 --- a/var/spack/repos/builtin/packages/bcftools/package.py +++ b/var/spack/repos/builtin/packages/bcftools/package.py @@ -37,10 +37,12 @@ class Bcftools(Package): version('1.6', 'c4dba1e8cb55db0f94b4c47724b4f9fa') version('1.4', '50ccf0a073bd70e99cdb3c8be830416e') version('1.3.1', '575001e9fca37cab0c7a7287ad4b1cdb') + version('1.2', '8044bed8fce62f7072fc6835420f0906') depends_on('htslib@1.6', when='@1.6') depends_on('htslib@1.4', when='@1.4') depends_on('htslib@1.3.1', when='@1.3.1') + depends_on('htslib@1.2', when='@1.2') def install(self, spec, prefix): make("prefix=%s" % prefix, "all") diff --git a/var/spack/repos/builtin/packages/htslib/package.py b/var/spack/repos/builtin/packages/htslib/package.py index e61da166f59..7fdc79406e0 100644 --- a/var/spack/repos/builtin/packages/htslib/package.py +++ b/var/spack/repos/builtin/packages/htslib/package.py @@ -34,7 +34,14 @@ class Htslib(AutotoolsPackage): version('1.6', 'd6fd14e208aca7e08cbe9072233d0af9') version('1.4', '2a22ff382654c033c40e4ec3ea880050') version('1.3.1', '16d78f90b72f29971b042e8da8be6843') + version('1.2', '64026d659c3b062cfb6ddc8a38e9779f', + url='https://github.com/samtools/htslib/archive/1.2.tar.gz') depends_on('zlib') depends_on('bzip2', when="@1.4:") depends_on('xz', when="@1.4:") + + depends_on('m4', when="@1.2") + depends_on('autoconf', when="@1.2") + depends_on('automake', when="@1.2") + depends_on('libtool', when="@1.2")