Peter Scheibel
56a1663cd9
spack find -c: search all concretized-but-not-installed specs (#44713 )
...
Originally if you had `x -> y -> z`, and an env with `x` in its speclist that is concretized but not installed, then `spack find -c y` would not show anything. This was intended: `spack find` has up-until-now only ever listed out installed specs (and `-c` was for adding a preamble section about roots).
This changes `spack find` so:
* `-c` makes it search through all concretized specs in the env (in a sense it is anticipated that a concretized environment would serve as a "speculative" DB and users may want to query it like they query the DB outside of envs)
* Adds a `-i/--install-status` option, equivalent to `-I` from `spack spec`
* Shows install status for either `-c` or `-i`
* As a side effect to prior point, `spack find -i` can now distinguish different installation states (upstream/external)
Examples:
```
$ spack find -r
==> In environment findtest
==> 1 root specs
- raja
==> 6 installed packages (not shown)
==> 12 concretized packages to be installed (not shown)
```
```
$ spack find
==> In environment findtest
==> 1 root specs
- raja
-- darwin-ventura-m1 / apple-clang@14.0.3 -----------------------
berkeley-db@18.1.40 bzip2@1.0.8 diffutils@3.10 gmake@4.4.1 gnuconfig@2022-09-17 libiconv@1.17
==> 6 installed packages
==> 12 concretized packages to be installed (show with `spack find -c`)
```
```
$ spack find -c
==> In environment findtest
==> 1 root specs
- raja
-- darwin-ventura-m1 / apple-clang@14.0.3 -----------------------
[+] berkeley-db@18.1.40 [+] bzip2@1.0.8 - cmake@3.29.4 [+] diffutils@3.10 [+] gmake@4.4.1 [+] libiconv@1.17 - nghttp2@1.62.0 - pkgconf@2.2.0 - readline@8.2
- blt@0.6.2 - camp@2024.02.1 - curl@8.7.1 - gdbm@1.23 [+] gnuconfig@2022-09-17 - ncurses@6.5 - perl@5.38.2 - raja@2024.02.2 - zlib-ng@2.1.6
==> 6 installed packages
==> 12 concretized packages to be installed
```
$ spack -E find
...
==> 82 installed packages
```
2024-07-09 11:53:20 -07:00
Rocco Meli
f9a46d61fa
charmpp: add v8.0.0 ( #45097 )
...
* charmpp v8.0.0
---------
Co-authored-by: RMeli <RMeli@users.noreply.github.com>
2024-07-09 10:21:41 -06:00
Mikael Simberg
a81451ba1f
pika: add v0.26.0 ( #45104 )
2024-07-09 10:01:57 -06:00
Rocco Meli
b11e370888
namd 3.0 ( #45096 )
2024-07-09 09:54:29 -06:00
Massimiliano Culpo
54ee7d4165
Remove the "install_mockery_mutable_config" fixture ( #45129 )
...
This fixture was introduced in #16429 , and made
redundant in #39024
2024-07-09 11:23:49 +02:00
Massimiliano Culpo
15efcbe042
Fix conflicting use of config and mutable_config fixtures in unit tests ( #45106 )
...
and add a fixture to detect use of conflicting fixtures
2024-07-09 09:51:04 +02:00
Alec Scott
7c5fbee327
Improve organization of CI workflow scripts and pip requirements ( #45037 )
2024-07-09 04:46:09 +02:00
Satish Balay
b19c4cdcf6
petsc, py-petsc4py: add v3.21.3 ( #44954 )
...
* petsc, py-petsc4py: add v3.21.3
* py-petsc4py: requires cython v3 since v3.20
2024-07-08 15:40:36 -07:00
Harmen Stoppels
3212cf86f4
environments.rst: go from simple to advanced ( #45004 )
...
* environments.rst: go from simple to advanced
* improvements
* notes about activation
2024-07-08 15:36:18 -07:00
Auriane R
fbceae7773
[py-datasets] Add py-datasets version 2.20.0 ( #44903 )
...
* Add py-datasets version 2.20.0
* Add dependency requirements for version 2.20 + refactor
* Add missing tqdm and requests versions and to install latest py-datasets
* Add missing python requirements for 2.8.0 and 2.20.0
2024-07-08 15:21:14 -07:00
George Young
b921d1a920
gtfsort: new package ( #45062 )
...
* gtfsort: new rust package @0.2.2
---------
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2024-07-08 15:07:22 -07:00
Robert Cohn
8128b549a5
[intel-oneapi-dpct] correct 2024.2.0 hash ( #45100 )
2024-07-08 13:46:55 -07:00
Alex Richert
7405d95035
ip2: deprecate package, fix sp dependency ( #45064 )
2024-07-08 22:18:15 +02:00
Harmen Stoppels
a04b12a3ef
spec.py: print right deptype in tree ( #45091 )
...
Fix a bug where Spec.tree with cover=nodes reduces deptypes from all
in-edges, including from nodes not reachable from the root, which almost
always happens for concrete specs
2024-07-08 18:25:57 +02:00
Massimiliano Culpo
cbf8f2326d
pinentry: add v1.3.1 ( #45073 )
2024-07-08 08:58:14 -07:00
Harmen Stoppels
297874bfed
spec.py: fix __getitem__ looking outside of dag ( #45090 )
...
`Spec.__getitem__` queries dependent edges, which almost always point to
nodes outside the sub-dag considered. It should only ever look at edges
being traversed.
2024-07-08 14:53:51 +02:00
Massimiliano Culpo
74398d74ac
Add type-hints to RepoPath ( #45068 )
...
* Also, fix a bug with use_repositories + import spack.pkg
2024-07-08 11:48:39 +02:00
afzpatel
cef9c36183
kripke: update version to 1.2.7 ( #44791 )
...
* initial commit to update kripke to 1.2.7
* fix style errors
2024-07-08 02:16:24 -06:00
Wouter Deconinck
5e7430975a
zlib-ng: add v2.1.7, v2.2.1 ( #45076 )
2024-07-08 09:40:44 +02:00
Adam J. Stewart
1456f6dba1
py-scikit-learn: add v1.5.1 ( #45016 )
2024-07-08 09:29:11 +02:00
Hariharan Devarajan
daf74a60ca
cpp-logger: add v0.0.4 ( #45033 )
2024-07-08 09:28:33 +02:00
Niclas Jansson
87df95c097
neko: add v0.8.0 ( #45086 )
...
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-07-08 01:26:44 -06:00
Richard Berger
9b49576875
legion: bugfix for +cuda+cuda_unsupported_compiler ( #45036 )
...
When using a newer Clang for Kokkos than supported by a given CUDA version, the
CUDA compiler detection in Legion's CMake still needs to be passed
CMAKE_CUDA_FLAGS to pass the compiler check.
2024-07-08 09:25:09 +02:00
Hariharan Devarajan
065cbf79fc
gotcha: add v1.0.7 ( #45043 )
2024-07-08 09:22:19 +02:00
Rocco Meli
09b89e87a4
DLA-Future-Fortran: add v0.2.0 ( #45055 )
2024-07-08 09:16:31 +02:00
Adam J. Stewart
ddab6156a6
py-numpy: add v2.0.0 ( #44735 )
2024-07-08 09:14:50 +02:00
Harry Sharma
10cdfff0d1
feat: add diamond@2.1.[8,9] ( #45047 )
2024-07-08 09:05:32 +02:00
Adam J. Stewart
3328416976
py-matplotlib: add v3.9.1 ( #45060 )
2024-07-08 08:59:10 +02:00
Wouter Deconinck
094a621f3c
acts: add v35.1.0, v35.2.0 ( #44963 )
...
Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-07-08 08:46:57 +02:00
Wouter Deconinck
87ce5d8ccb
py-webcolors: add v24.6.0 ( #45075 )
2024-07-08 08:45:15 +02:00
Wouter Deconinck
bcdc92e25f
vc: add v1.4.5 ( #45077 )
2024-07-08 08:43:16 +02:00
Wouter Deconinck
a323fab135
util-linux{-uuid}: add v2.40.2 ( #45079 )
...
Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-07-08 08:40:14 +02:00
Wouter Deconinck
d42031b075
assimp: add v5.4.2 ( #45081 )
...
Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-07-08 08:33:06 +02:00
Jonathon Anderson
efbb18aa25
hpctoolkit: minor fixes for build failures ( #45070 )
2024-07-08 08:22:11 +02:00
Harmen Stoppels
8a430f89b3
spack -C <env>: use env config w/o activation ( #45046 )
...
Precedence:
1. Named environment
2. Anonymous environment
3. Generic directory
2024-07-06 22:02:25 -07:00
dependabot[bot]
aeaa922eef
build(deps): bump actions/upload-artifact from 4.3.3 to 4.3.4 ( #45069 )
...
Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact ) from 4.3.3 to 4.3.4.
- [Release notes](https://github.com/actions/upload-artifact/releases )
- [Commits](65462800fd...0b2256b8c0
2024-07-06 08:20:30 +02:00
Hadrien G
a6d5a34be3
Remove myself from maintainer lists ( #45071 )
2024-07-06 08:17:31 +02:00
Todd Gamblin
ba79542f3c
spack gc: remove debug print statement ( #45067 )
...
Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-07-05 22:36:45 +02:00
Auriane R
dc10c8a1ed
[py-transformers] Add newer versions ( #45022 )
...
* Add newer versions for py-transformers
* Add dependencies needed for py-transformers latest version
* Enforce dependencies requirements for py-transformers newer versions
2024-07-05 14:52:24 +02:00
Auriane R
5ab814505e
py-flash-attn: add v2.5.6 -> main ( #44894 )
...
* Add latest releases of py-flash-attn
* Add main branch for flash attention
* Add additional requirements
2024-07-05 06:19:01 -06:00
Harmen Stoppels
1d8bdcfc04
config: fix class hierarchy ( #45044 )
...
1. Avoid that `self.path` is of type `Optional[str]`
2. Simplify immutable config with a property.
2024-07-05 12:41:13 +02:00
Massimiliano Culpo
95cf341b50
Inject dependencies in repo classes ( #45053 )
2024-07-05 12:00:41 +02:00
Benjamin Fovet
a134485b1b
remove trailing dot in gmsh 4.13.0 shasum ( #45054 )
2024-07-05 10:18:11 +02:00
dependabot[bot]
d39edeb9a1
build(deps): bump docker/setup-buildx-action from 3.3.0 to 3.4.0 ( #45051 )
...
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action ) from 3.3.0 to 3.4.0.
- [Release notes](https://github.com/docker/setup-buildx-action/releases )
- [Commits](d70bba72b1...4fd812986e
2024-07-04 19:28:35 -05:00
dependabot[bot]
453fb27be2
build(deps): bump docker/build-push-action from 6.2.0 to 6.3.0 ( #45042 )
...
Bumps [docker/build-push-action](https://github.com/docker/build-push-action ) from 6.2.0 to 6.3.0.
- [Release notes](https://github.com/docker/build-push-action/releases )
- [Commits](15560696de...1a162644f9
2024-07-04 19:28:21 -05:00
dependabot[bot]
831f04fb7d
build(deps): bump docker/setup-qemu-action from 3.0.0 to 3.1.0 ( #45041 )
...
Bumps [docker/setup-qemu-action](https://github.com/docker/setup-qemu-action ) from 3.0.0 to 3.1.0.
- [Release notes](https://github.com/docker/setup-qemu-action/releases )
- [Commits](68827325e0...5927c834f5
2024-07-04 19:28:03 -05:00
Wouter Deconinck
04044a9744
containers: rm centos7 since EOL ( #45049 )
2024-07-04 22:22:23 +02:00
Massimiliano Culpo
8077285a63
flux-core: remove deprecated versions ( #45014 )
2024-07-04 22:15:55 +02:00
Paul R. C. Kent
537926c1a7
py-pyscf: add v2.6.0, v2.6.1, v2.6.2 ( #45032 )
...
* pyscf: add 260 261 262
* Fix max version typo
2024-07-04 12:43:27 -05:00
Stephen Nicholas Swatman
02ff3d7b1e
acts-algebra-plugins: new package ( #44861 )
...
This commit adds the `acts-algebra-plugins` package which provides the
Acts project with linear algebra functionality.
2024-07-04 09:51:18 -05:00
