Adrien M. BERNEDE
0301896bf1
Apply fix suggested by @becker33 to copy over relatives includes at env creation
2025-01-21 11:43:17 +01:00
Adrien M. BERNEDE
d6334f7d39
Revert "Test a change @becker33 suggested to work around issue"
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This reverts commit ca65fff09a
2025-01-21 11:42:09 +01:00
Adrien M. BERNEDE
ca65fff09a
Test a change @becker33 suggested to work around issue
2025-01-15 10:40:26 +01:00
Mosè Giordano
70534ac9d4
r-deseq2: add new versions ( #48157 )
2025-01-10 14:36:53 -08:00
Chris Marsh
b369d8b250
py-netcdf4: add v1.7.2 and fix variant ( #47824 )
2025-01-10 21:52:42 +01:00
Mosè Giordano
4d2319a785
r-sparsematrixstats: add new versions ( #48154 )
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Also, specify incompatibility with `r-matrixstats` versions.
2025-01-10 10:50:04 -08:00
Dom Heinzeller
d6a9511f39
py-cylc-flow package: update package and dependents/dependencies
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* Add py-protobuf@4.24.4 (needed for py-cylc-flow@8.3.6).
* Add py-cylc-flow@8.3.6 and enable png output when creating graphs
by requesting variant pangocairo for graphviz dependency.
* Add corresponding versions of py-metomi-rose@2.3.2,
py-cylc-rose@1.4.2, py-cylc-uiserver@1.4.2.
* Add myself as maintainer to all the cylc-related packages.
2025-01-10 10:12:41 -08:00
Massimiliano Culpo
dd69b646ad
Add subscript notation to packages ( #48467 )
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This PR allows using the subscript notation directly on packages. The
intent is to reduce the boilerplate needed to retrieve package
properties from nodes other than root.
2025-01-10 19:00:51 +01:00
Niklas Bölter
b670205e54
py-nvitop: new package ( #48426 )
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* Adding nvitop package
* [@spackbot] updating style on behalf of nboelte
* Adding dependency constraints and types
* Adding maintainer
* Adding python version dependency
* Style fix
* Commented out unused platform=windows dependency
2025-01-10 09:18:12 -08:00
Harmen Stoppels
d6d8800466
executable.py: fix overlapping overload set ( #48503 )
2025-01-10 16:34:04 +00:00
Rocco Meli
7a32954f7f
dftd4: add v3.6.0 and v3.7.0, update URL ( #48500 )
2025-01-10 16:13:15 +01:00
Massimiliano Culpo
92564ecd42
palace: add a dependency on c ( #48315 )
2025-01-10 15:15:57 +01:00
Massimiliano Culpo
c1258a1431
chai: add dependency on C ( #48316 )
2025-01-10 15:15:14 +01:00
Harmen Stoppels
d46ac9b1e4
spec.py: fix return type of concretized() ( #48504 )
2025-01-10 13:31:41 +00:00
Massimiliano Culpo
2e472a13e5
llvm: minimal fix for llvm_config method ( #48501 )
2025-01-10 11:36:07 +01:00
Harmen Stoppels
7edb525599
binary_distribution: improve deps_to_relocate ( #48484 )
2025-01-10 11:32:11 +01:00
Harmen Stoppels
93cd216603
binary_distribution: stop relocating tarballs with relative rpaths ( #48488 )
2025-01-10 11:30:18 +01:00
Harmen Stoppels
c1d385ada2
traverse: use overload for return type when depth=True vs depth=False ( #48482 )
2025-01-10 09:53:28 +01:00
Dom Heinzeller
464390962f
Comment out py-arrow@1.3.0 because of build errors with basic gcc stack ( #48478 )
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* Comment out py-arrow@1.3.0 because of build errors with basic gcc stack
* Also comment out 1.3.0-specific depends_on lines
2025-01-09 19:43:47 -07:00
Wouter Deconinck
16734cd8c6
mlpack: add v4.5.1 ( #48334 )
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* mlpack: add v4.5.1
* mlpack: variant +go when=@4.5.1:
2025-01-09 18:40:49 -08:00
Alec Scott
1dd9eeb0c6
rust: fix dependency version constraint ( #48445 )
2025-01-09 18:37:25 -08:00
Wouter Deconinck
f4ef0aec28
armadillo: add v14.2.2 ( #48480 )
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* armadillo: add v14.2.2
* armadillo: hdf5 support ends with v10
2025-01-09 18:34:58 -08:00
Buldram
ea2c70a21a
toybox: depend on virtual zlib ( #48486 )
2025-01-09 18:33:20 -08:00
Weiqun Zhang
72ddc03da9
amrex: add v25.01 ( #48423 )
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* amrex: add v25.01
* Add dependency on rocsparse
---------
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2025-01-09 17:37:26 -08:00
Alec Scott
32de71b0b6
gnutls: add v3.8.8 ( #48373 )
2025-01-09 19:23:20 -06:00
Stephen Nicholas Swatman
e94d5b935f
acts dependencies: new versions as of 2025/01/08 ( #48465 )
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New year, new versions of the ACTS dependencies. This time, we have a
new version of detray, a new version of algebra plugins, as well as a
new version of ACTS itself.
2025-01-09 19:22:20 -06:00
Alberto Invernizzi
85649be232
py-stevedore: bump to version 5.4.0 (plus some intermediate ones as well) ( #47784 )
2025-01-09 16:55:40 -08:00
Harmen Stoppels
c23d2cdb2b
lmod: add v8.7.55 ( #48439 )
2025-01-09 16:43:08 -08:00
Wouter Deconinck
dc5dd896a2
ensmallen: add v2.22.1 ( #48481 )
2025-01-09 16:41:46 -08:00
Dave Keeshan
43f23589ef
verilator: add v5.032 ( #48493 )
2025-01-09 16:40:24 -08:00
Massimiliano Culpo
5085f635dd
Add type hints to spack.util.executable.Executable ( #48468 )
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* Add type-hints to `spack.util.executable.Executable`
* Add type-hint to input
* Use overload, and remove assertions at calling sites
* Bump mypy to v1.11.2 (working locally), Python to 3.13
2025-01-09 14:16:24 -08:00
Paul R. C. Kent
46da7952d3
llvm: add v19.1.6 ( #48162 )
2025-01-09 13:51:46 -08:00
Adam J. Stewart
72783bcb0a
py-keras: add v3.8.0, remove optional deps ( #48461 )
2025-01-09 09:16:57 -08:00
Olivier Cessenat
f4d2ff0068
ocaml: compile versions before 4.8.0 again ( #48470 )
2025-01-09 09:15:12 -08:00
Adam J. Stewart
a2b7fee3fe
py-timm: add v1.0.12 ( #48474 )
2025-01-09 09:11:08 -08:00
Mikael Simberg
2ebf2df421
mold: Add 2.36.0 ( #48483 )
2025-01-09 13:20:40 +01:00
dependabot[bot]
e725aa527e
build(deps): bump codecov/codecov-action from 5.0.3 to 5.1.2 ( #48200 )
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Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action ) from 5.0.3 to 5.1.2.
- [Release notes](https://github.com/codecov/codecov-action/releases )
- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md )
- [Commits](05f5a9cfad...1e68e06f1d
2025-01-09 12:33:45 +01:00
Richard Berger
7455c8d173
libmesh: add newer versions up to 1.7.6 ( #48476 )
2025-01-09 04:07:48 -07:00
Vanessasaurus
99e2bce99f
Automated deployment to update package flux-core 2025-01-08 ( #48466 )
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Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2025-01-09 03:38:42 -07:00
Buldram
4204d16fd3
toybox: new package ( #48472 )
2025-01-09 03:33:28 -07:00
dependabot[bot]
e76677cbd5
build(deps): bump pygments from 2.18.0 to 2.19.1 in /lib/spack/docs ( #48431 )
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Bumps [pygments](https://github.com/pygments/pygments ) from 2.18.0 to 2.19.1.
- [Release notes](https://github.com/pygments/pygments/releases )
- [Changelog](https://github.com/pygments/pygments/blob/master/CHANGES )
- [Commits](https://github.com/pygments/pygments/compare/2.18.0...2.19.1 )
---
updated-dependencies:
- dependency-name: pygments
dependency-type: direct:production
update-type: version-update:semver-minor
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Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2025-01-09 11:31:42 +01:00
Wouter Deconinck
57357a540f
py-iminuit: new versions through v2.30.1 ( #48471 )
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* py-iminuit: new versions through v2.30.1
* py-iminuit: add tag hep
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Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2025-01-09 03:18:18 -07:00
Adam J. Stewart
97e0b39b32
py-segmentation-models-pytorch: add v0.4.0 ( #48473 )
2025-01-08 15:32:09 -08:00
Paul Gessinger
247da9ea7a
root: Patch range restriction and gcc lower bound ( #48449 )
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* root: Restrict patch range
* root: Set minimum gcc version for cxxstd=20
* root: fix gcc range when cxxstd 20
Co-authored-by: Paul Gessinger <hello@paulgessinger.com>
---------
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2025-01-08 16:03:08 -06:00
Sinan
07f89a73d1
libspatialite: fix for newer libxml2 ( #48125 )
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* package/libspatialite fix for newer libxml
* clarify constraint
* fix issue properly via variant
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Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2025-01-08 12:58:14 -08:00
Krishna Chilleri
60cfdcb6cc
py-neo4j: new package ( #48383 )
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* add neo4j package
* [@spackbot] updating style on behalf of kchilleri
* modifying license header
2025-01-08 13:46:32 -06:00
Seth R. Johnson
1c9b042d3a
googletest: new version, absl support, c++20 flag ( #48328 )
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* googletest: new version, absl support, c++20 flag
* Update googletest header
2025-01-08 11:22:38 -08:00
Harmen Stoppels
c424611010
directory_layout.py: remove dependency on global spack.store.STORE ( #48460 )
2025-01-08 17:44:32 +01:00
Xuefeng Ding
35963d7d7d
geant4-data: support G4TENDL ( #48310 )
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* add parse tool, json, and load json
bug fix
add variants and conflictions for g4tendl
* correct format
* correct format
* update version mapping
* remove 1.0
* Update var/spack/repos/builtin/packages/geant4-data/package.py
Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
* add options
* depends on it
* fix typo
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Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
2025-01-08 10:40:06 -06:00
Wouter Deconinck
7e62ca864a
ninja: support tests for 1.12 and later ( #48385 )
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* ninja: support tests for 1.12:
* ninja: fix style
2025-01-08 16:57:25 +01:00
