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239 Commits

Author SHA1 Message Date
Todd Gamblin
50f74c117e Fix for SPACK-22: Consistent dependency hashing. 
The dependency hash wasn't being generated in a consistent way: when
read from .spec file in the install directory, the spec DAG was not
normalized, but when generated on install, it was.  Thus the same
spec can have two possible hashes, which is obviously not good.

In this commit:
- Added a dep_hash function to spec, which should be used to get the
  dependency hash in all cases.  This function normalizes the spec
  before generating the hash.

- removed sha1 functions from Spec and DependencyHash.  The one on
  Spec is not needed and is confusing (it hashed the whole spec, not
  just hash the deps) and the one on DependencyHash wasn't guaranteed
  to be safe because it can't normalize its parent spec before
  hashing.

Hopefully this makes things consistent and easy.
 2014-04-14 14:11:58 -07:00
Todd Gamblin
9fa99030eb Print compiler correctly. 2014-04-14 13:53:40 -07:00
Todd Gamblin
1f9dfeb9b5 Clean up find command, move code to utils. 2014-04-14 12:53:23 -07:00
Todd Gamblin
1e51daab08 Fix broken calls into colify. 2014-04-14 09:42:53 -07:00
Todd Gamblin
79c5dd0952 Fix SPACK-21: stage names are too long 
Stage names now hash dependencies like install prefixes.
 2014-04-13 17:32:22 -07:00
Todd Gamblin
59a3b8dc67 Make SSL verification failures recommend spack -k 
- Adds optional long message to SpackError
- tty now wraps long message text.
 2014-04-13 16:38:15 -07:00
Todd Gamblin
980c1f0e47 Update docs for new package structure. 2014-03-16 17:05:24 -07:00
Todd Gamblin
81dc27bf41 Move packages and mock packages to /var/spack 2014-03-16 17:05:15 -07:00
Todd Gamblin
566dc037e7 Add a test for package names 2014-03-16 15:24:03 -07:00
Todd Gamblin
8b1c760ea3 Modify create and edit to work with new package format. 2014-03-16 15:23:44 -07:00
Todd Gamblin
b8b334e86c New, more consistent package directory structure. 
- Packages now live in <package_name>/package.py

- spack.packages refactored to use a PackageDB object instead of
  monolithic module.

- Implementation of mock_packages_test.py is greatly simplified

- Added test to exercise install/uninstall code because that wasn't
  covered by existing tests and kept breaking.
 2014-03-16 14:51:03 -07:00
Todd Gamblin
74ec74d73c Integrate & clean up packages from LLNL hackathon. 2014-03-15 19:46:41 -07:00
Todd Gamblin
61fc2317d8 Merge branch 'openmpi' into next 2014-03-15 16:00:50 -07:00
Todd Gamblin
f6ea9406c3 Merge branch 'scr' into next 2014-03-15 16:00:20 -07:00
Todd Gamblin
a3beb688e1 Merge branch 'spindle' into next 
- Fixed conflicting changes to env/cc
- TODO: get rid of small hack in cc for machines with no CC
 2014-03-15 13:08:20 -07:00
Todd Gamblin
bb00f2a7a0 Merge branch 'stat' into next 2014-03-15 12:57:41 -07:00
Todd Gamblin
27093790dc Merge branch 'launchmon' into next 2014-03-15 12:57:34 -07:00
Adam Moody
2588e023ec patches for openmpi 1.6.5 2014-03-15 09:11:44 -07:00
Adam Moody
b207c6779b adding scr 2014-03-15 08:58:18 -07:00
Todd Gamblin
9d01df9e8a Moving utilities to a common LLNL package. 2014-03-14 16:21:15 -07:00
Gregory L. Lee
e38e79417b cleaned up fixmes in package 2014-03-14 13:19:54 -07:00
Gregory L. Lee
6a185dfb24 launchmon dependency added as comment, need Jira SPACK-21 fixed 2014-03-14 12:56:40 -07:00
Gregory L. Lee
f0f0c99c55 launchmon dependency added as comment, need Jira SPACK-20 fixed 2014-03-14 12:54:28 -07:00
Gregory L. Lee
7b28ee2cd2 Merge branch 'launchmon' of ssh://cz-stash.llnl.gov:7999/scale/spack into stat 2014-03-14 12:05:12 -07:00
Gregory L. Lee
759d33ac5b fixes for launchmon build 2014-03-14 12:04:27 -07:00
Matthew LeGendre
cfbf348982 Fix spindle launchmon dependency 2014-03-14 12:04:18 -07:00
Matthew LeGendre
6147d52f2d Merge branch 'version_opt' into spindle 2014-03-14 11:33:37 -07:00
Matthew LeGendre
40cda9fa9c Fix issue when compiler wrappers ran gcc -V 2014-03-14 11:22:09 -07:00
Gregory L. Lee
9cbf5bc311 added workaround to libtool bug + config using non-spack launchmon 2014-03-14 11:06:23 -07:00
Gregory L. Lee
b104c3efce initial stat creation 2014-03-14 08:42:08 -07:00
Gregory L. Lee
37d30f4886 removed curl -k hack after rebase with spack -k fix 2014-03-14 08:42:08 -07:00
Gregory L. Lee
f1f5a5a0bf workarounds for bugs 2014-03-14 08:42:08 -07:00
Adam Moody
940dd829da adding pmgr_collective 2014-03-14 08:42:08 -07:00
Todd Gamblin
47f0edcbe4 Add str() calls around messages in tty 2014-03-14 08:42:08 -07:00
Matthew LeGendre
db92db1c7a Use unzip to unpackage .zip files 2014-03-14 08:42:07 -07:00
Todd Gamblin
40dda596a0 Support github URLs 2014-03-14 08:42:07 -07:00
Adam Moody
ab8e79fc2d change rename to move in mirror creation 2014-03-14 08:42:07 -07:00
Gregory L. Lee
26b86db8a4 added mrnet and graphlib 2014-03-14 08:42:07 -07:00
Matthew LeGendre
008d7a3162 Change spindle package to use hardcoded LaunchMON path 2014-03-13 17:04:02 -07:00
Matthew LeGendre
6f43da74ed Merge branch 'master' into spindle 2014-03-13 16:52:21 -07:00
Matthew LeGendre
bb9c5a19cf Add build fix patch to launchmon 2014-03-13 16:38:34 -07:00
Todd Gamblin
7d655b5407 Add force_url option to launchmon for unversioned URL 2014-03-13 16:09:42 -07:00
Matthew LeGendre
5d96844e57 Add launchmon package to spack 2014-03-13 16:08:22 -07:00
Todd Gamblin
c3b72c3d7c Added a force_url option for packages that do not have nice URLs 2014-03-13 16:08:07 -07:00
Adam Moody
03ee31e0e8 Merge branch 'master' of https://lc.llnl.gov/stash/scm/scale/spack 2014-03-13 15:56:44 -07:00
Adam Moody
fadd2032a3 adding pmgr_collective 2014-03-13 15:56:29 -07:00
Todd Gamblin
6058f7aac6 Add str() calls around messages in tty 2014-03-13 15:53:18 -07:00
Matthew LeGendre
67203f17e0 Merge branch 'master' into zippackages 2014-03-13 15:18:15 -07:00
Matthew LeGendre
15840cc677 Use unzip to unpackage .zip files 2014-03-13 15:17:26 -07:00
Todd Gamblin
77aeac6501 Support github URLs 2014-03-13 14:51:28 -07:00
Adam Moody
c3f3353de0 change rename to move in mirror creation 2014-03-13 14:43:26 -07:00
Matthew LeGendre
78abdcea16 add spindle package 2014-03-13 14:14:31 -07:00
Todd Gamblin
cf5e850f27 Add spack patch docs to build process section. 2014-02-10 09:58:09 -08:00
Todd Gamblin
7152c82ec7 Document mirrors and change mirror precedence. 2014-02-10 09:48:07 -08:00
Todd Gamblin
c9dc4636cc Command to create spack mirrors. 2014-02-10 09:07:24 -08:00
Todd Gamblin
93e80852f5 Cleanup find_versions_of_archive. 
- less kludgy matching -- we nw extract the version straight from a
  capture group in the original match, rather than by trying to match
  again.

- Avoids problems like finding "2" as the version in mvapich2-1.9, when
  "2" here is part of the package name.
 2014-02-09 09:11:12 -08:00
Todd Gamblin
be7e0a9604 Added docs for patching. 2014-02-08 19:29:33 -08:00
Todd Gamblin
36b6ad2242 started patch docs. 2014-02-08 18:57:04 -08:00
Adam Moody
10148ff802 add mvapich2 module 2014-02-08 18:13:42 -08:00
Todd Gamblin
b816f71f8c Support for patches in packages. 
- packages can provide patch() directive to specify a patch file that
  should be applied to source code after expanding it and before
  building.

- patches can have a when spec, so they're only applied under certain
  conditions

- patches can be local files in the package's own directory, or they
  can be URLs which will be fetched from the internet.
 2014-02-08 18:11:54 -08:00
Todd Gamblin
9a29aa8d03 Packages can now live in directories, not just .py files. 
This gives us a place to put patch files.
 2014-02-08 15:18:24 -08:00
Todd Gamblin
f09c58549a Fix regex used in find_versions_of_archive. 
Fixes github issue #2, as well as spack create for mvapich.
 2014-02-07 10:36:58 -08:00
Todd Gamblin
3df638dd41 Add dirty options to create and checksum, like install. 2014-02-07 10:10:28 -08:00
Todd Gamblin
42610be2e5 Fix bugs that crept into spack clean when stage was refactored. 2014-02-07 09:28:50 -08:00
Todd Gamblin
19df908cb6 Make default spack text non-bold 2014-02-07 09:13:10 -08:00
jprotze
f6a484519e fix alias naming 2014-02-07 14:19:16 +01:00
Todd Gamblin
73774c1249 Spack message text is just bold, not bold white now. 
- added capability for just bold and just underline to color.py
- Make tty.msg() display bold text instead of bold white
 2014-02-06 16:58:23 -08:00
Todd Gamblin
72f0192ddd Fixed regressions. 2014-02-05 08:30:28 -08:00
Todd Gamblin
9e469c37c4 Bugfix in clean command. 2014-02-05 00:17:36 -08:00
Todd Gamblin
4a913cbbd0 Fix bug in make jobs parameter. 2014-02-05 00:17:36 -08:00
Todd Gamblin
a71c59d4fe Fix Mac OS package icon. 2014-02-05 00:17:36 -08:00
Todd Gamblin
a6b24f85df Architecture string can contain '.' now. 2014-02-05 00:17:35 -08:00
Todd Gamblin
14278fdf0a Allow file URLs 2014-02-05 00:17:35 -08:00
Todd Gamblin
09300d9261 Ignore more errors when spidering. 2014-02-05 00:17:35 -08:00
Todd Gamblin
7290322d96 Fix spelling error in tmp dir 2014-02-05 00:17:35 -08:00
Todd Gamblin
badb130eff Simplify redundant conditional. 2014-02-05 00:17:35 -08:00
Todd Gamblin
c0ea783310 Fix import bug. 2014-02-05 00:17:34 -08:00
Todd Gamblin
6d956f372f Fix bug in staging. 
- Stage needs to account for symlinks in self.tmp_dir
- Use os.realpath on self.tmp_dir when checking to see if a stage needs to be rebuilt
 2014-02-05 00:17:34 -08:00
Todd Gamblin
03a32f0d5b Can now mirror tarballs in a local directory. 
- Can add tarballs to local directory; no longer have to download from source URL.
 2014-02-05 00:17:34 -08:00
Gregory L. Lee
b4da28f71e bug fixes 
- Make prefix an actual string so that install doesn't fail.
- Executable should throw SpackError on command failure.
 2014-01-23 01:30:44 -08:00
Todd Gamblin
8f7c92706f More typo fixes 2014-01-15 00:46:05 -08:00
Todd Gamblin
cab94f86ee typo fixes from Adam 2014-01-14 23:50:50 -08:00
Todd Gamblin
91d6f0b481 Developer documentation 2014-01-12 18:22:19 +01:00
Todd Gamblin
d18be7437f Remove trailing whitespace from license text 2014-01-12 18:19:18 +01:00
Todd Gamblin
08a25adb2f Site configuration docs 2014-01-11 20:42:48 +01:00
Todd Gamblin
72e54caf06 Add line to disable jekyll on github. 2014-01-09 18:18:38 +01:00
Todd Gamblin
912a87c868 Fix docs to account for license header. 2014-01-09 18:06:18 +01:00
Todd Gamblin
ad746bd686 Add a rule for automatically creating gh-pages from html docs. 2014-01-09 16:35:46 +01:00
Todd Gamblin
0b5d531f31 make empty _static directory "exist" to git 
Sphinx really wants the _static directory to exist, but git doesn't.
This is a compromise to avoid superfluous warnings from sphinx.

See here:

http://stackoverflow.com/questions/115983/how-do-i-add-an-empty-directory-to-a-git-repository
 2014-01-09 14:03:32 +01:00
Todd Gamblin
837fc18d14 Add release number to docs and license. 2014-01-08 11:23:15 +01:00
Todd Gamblin
402c158f3b Change to github URL in docs. 2014-01-08 11:02:12 +01:00
Todd Gamblin
ce9b3511d0 Add license to python files and spack script. 2014-01-08 10:21:35 +01:00
Todd Gamblin
2f520d6119 Change multimethods to take first match instead of being rigid. 
- Formerly required that one and only one spec match
- Now allows first match in a list (more flexible and more intuitive)

- introduces new bug that provides() doesn't do the correct thing
  when a version is not in a range that has been explicitly provided.
- TODO: fix this.
 2014-01-07 09:52:29 +01:00
Todd Gamblin
36e6ef9fbd Packaging docs are mostly done. 2014-01-06 18:21:27 +01:00
Todd Gamblin
40229f6ed2 More packaging docs 2014-01-06 17:15:25 +01:00
Todd Gamblin
4c9c7ab65f Local specs now called "anonymous specs" 
- anonymous specs have no name
- "local spec" came from these first being used in multimethods, i.e. "name of the local Package"
- not the most intuitive name.
 2014-01-06 15:18:15 +01:00
Todd Gamblin
93e288859a Simpler prefix args. 2014-01-06 14:14:57 +01:00
Todd Gamblin
5f2feac92c Remove install methods from mock packages (not needed) 2014-01-06 11:05:58 +01:00
Todd Gamblin
df0c1134c9 SPACK-14: Bugfix in Spec.normalize() 
- Normalize now updates the provider index as it addes package dependencies.
- Fixes problem where this breaks:

  a depends_on mpi
  a depends_on b
  b depends_on mpich

- Packages now restrict the mpi dependency to mpich
 2014-01-06 09:25:51 +01:00
Todd Gamblin
d0b82d291f Change deps on 'mpich' to 'mpi' 2014-01-04 14:44:16 -08:00