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Author SHA1 Message Date
Jen Herting
b660a2112f New package: libcuml (#19471) 
* [libcuml] created template

* [libcuml] set cmake list dir

* [libcuml] added some dependencies

* [libcuml] adding some default cmake args

* [libcuml] depends on nccl

* [libcuml] temporarily disabling cuml prims building

* [libcuml] building internal faiss?

* [libcuml] added dependency treelite

* [libcuml] depends on google_test

* [libcuml] forcing single gpu per: https://github.com/rapidsai/cuml/issues/2528#issuecomment-657675957

* [libcuml] added prims?

* [libcuml] adding libcumlcomms ?

* Revert "[libcuml] adding libcumlcomms ?"

This reverts commit 0e0765b7d4d27bdc01d54d24e8c2f9eac1cb4eb2.

* Revert "[libcuml] added prims?"

This reverts commit d0b1f868ea5e425cc7d1a5ce7adc642258dfc38e.

* [libcuml] added varient single gpu

* [libcuml] removed variant singlegpu

* [libcuml] added homepage and description. removed fixmes

* [libcuml] flake8

* [libcuml] cleaning up leftover commented out code

* [libcuml] updated checksum added ucx dependency
 2020-11-11 10:55:57 -06:00
Sreenivasa Murthy Kolam
f5c7a3619a add spack recipe for rocm version of the tensile (#19669) 
* add spack recipe for rocm version of the tensile

* fix flake8 error
 2020-11-11 10:55:23 -06:00
Greg Becker
229fc11fdb axom: devtools require llvm clang-format (#19740) 
* follow-up to previous PR

* build type
 2020-11-11 10:54:24 -06:00
vvolkl
2c55d47c1e [podio] set pythonpath correctly (#19779) 
* [podio] put python dir in python path

* Update var/spack/repos/builtin/packages/podio/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2020-11-11 10:53:56 -06:00
Kai Torben Ohlhus
a6011ccbb7 suite-sparse: add versions 5.8.0 and 5.8.1 (#19812) 
Update homepage URL and see release notes:
- https://github.com/DrTimothyAldenDavis/SuiteSparse/releases/tag/v5.8.1
- https://github.com/DrTimothyAldenDavis/SuiteSparse/releases/tag/v5.8.0
 2020-11-11 10:53:27 -06:00
t-nojiri
48093350c6 arbor: Add version 0.4 (#19839) 2020-11-11 10:50:32 -06:00
Stephen Hudson
56df3fcbaa Add optional deps mpmath and deap to py-libensemble (#19852) 2020-11-11 10:45:16 -06:00
Keita Iwabuchi
8edd245bb3 Metall package: add v0.6 (#19854) 
* Metall: add version 0.2

* Add Metall v0.3

* Update Metall package to v0.4 and v0.5.

* Metall package: add v0.6
 2020-11-11 10:43:00 -06:00
t-nojiri
3167aec0ab ace: Add version 6.5.12 (#19856) 2020-11-11 10:42:30 -06:00
Mark Olesen
a90324a5b2 openfoam: remove mplibUSER provisioning (#19861) 
- has never been used by the spack package or by the upstream package

Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
 2020-11-11 10:38:50 -06:00
Ganesh Kumar
b1ca2a4346 ROCm3.9 recipe for rocblas, hipblas & rocsolver (#19841) 
* ROCm3.9 recipe for rocblas, hipblas & rocsolver

* review comments

* review comments

Co-authored-by: root <root@mlseqa-hyd-virt-srv-07.amd.com>
 2020-11-11 10:24:25 -06:00
Peter Scheibel
9d5f4f9c6f Binary caching: fix buildcache list (multiple invocations) (#19848) 
When invoking "buildcache list" multiple times, the command was
reporting no specs in the cache the second time around. The
presence of an up-to-date index was causing the internal
representation to be left un-initialized.
 2020-11-10 23:24:18 -08:00
Justin S
15fbbdea7d soapdenovo2: add 242 (#19849) 2020-11-10 20:12:28 -06:00
Christoph Junghans
f7e3ef1b5c votca-xtp: update deps (#19850) 2020-11-10 15:01:25 -07:00
t-nojiri
dd96a86511 abi-dumper: Add phases (#19807) 2020-11-10 12:53:39 -06:00
Phil Tooley
db5aa927db py-torchvision: gather correct cuda_arch setting from py-torch (#19845) 
* py-torchvision: gather correct cuda_arch setting from py-torch dependency

* py-torchvision: remove unneeded variant
 2020-11-10 12:28:01 -06:00
Daryl W. Grunau
f7f4171d4e py-scipy: set F90 for all compilers (#19818) 
* set F90 when compiling with Intel

* set F90 for all compilers

Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
 2020-11-10 10:52:54 -06:00
Wouter Deconinck
2913903e6a [geant4] depends_on glu when +opengl (#19821) 2020-11-10 10:29:21 +00:00
Greg Becker
0183a51c6c tutorial cmd: fix gpg invocation (#19829) 2020-11-09 21:09:36 -08:00
Adam J. Stewart
228a4d353c Fix minor typo in function comment (#19804) 2020-11-09 20:25:45 -05:00
Adam J. Stewart
65cef0a3ad py-gpytorch: add v1.2.1 (#19796) 2020-11-09 20:24:35 -05:00
h-denpo
d8d0935a24 saga-gis: add "depends_on('libsm', type='link')" (#19805) 2020-11-09 16:46:33 -06:00
Kai Torben Ohlhus
4e2f27141c openblas: Add versions 0.3.11 and 0.3.12 (#19811) 
[OpenBLAS 0.3.11](https://github.com/xianyi/OpenBLAS/releases/tag/v0.3.11) and [OpenBLAS 0.3.12](https://github.com/xianyi/OpenBLAS/releases/tag/v0.3.12) were released.
 2020-11-09 16:33:54 -06:00
Emir İşman
98e709da3b [docs] getting_started.rst: fix typo (#19815) 2020-11-09 16:31:53 -06:00
Wouter Deconinck
f69643512c [opencascade] depends_on libxext, libxmu, libxt, libxi (#19823) 
* [opencascade] depends_on libxmu and libxi

* [opencascade] depends_on libxext and libxt
 2020-11-09 16:24:51 -06:00
Satish Balay
01188396da Trilinos: add 13.0.1 (#19822) 2020-11-09 16:06:27 -05:00
Erik Schnetter
9619f77550 spiral: new version 8.2.0 (#19794) 
* spiral: new version 8.2.0

* spiral: Sort versions anti-chronologically
 2020-11-09 14:32:49 -06:00
Toyohisa Kameyama
52eecad65c py-pygps: new package. (#19774) 
* py-pygps: new package.

* fixed url.
 2020-11-09 14:32:10 -06:00
Morten Kristensen
a047ea84a3 py-vermin: add latest version 1.0.2 (#19820) 2020-11-09 14:31:21 -06:00
Satish Balay
a0216922f1 add sundials 5.5.0 (#19819) 
(with xsdk build fixes, including mkl, superlu-dist)

Co-authored-by: Cody J. Balos <balos1@llnl.gov>
 2020-11-09 13:59:55 -06:00
Amjad Kotobi
04fdcbed09 ruby-narray: Added git master branch (#19817) 2020-11-09 13:04:22 -06:00
ilbiondo
740cc4058b tskit package (#19725) 
* tskit package

* Update var/spack/repos/builtin/packages/tskit/package.py

I can't see any hard requirement for 3.6:

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* fixes following PR review

* Update var/spack/repos/builtin/packages/tskit/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2020-11-09 13:03:09 -06:00
Ethan Stam
e73e7cf0ad ParaView: correct path for PARAVIEW_VTK_DIR (#19770) 
* ParaView: correct path for PARAVIEW_VTK_DIR

* Update formatting
 2020-11-09 13:02:00 -06:00
Todd Gamblin
4092c90b57 commands: add spack tutorial command (#19808) 
Added a command to set up Spack for our tutorial at
https://spack-tutorial.readthedocs.io.

The command does some common operations we need first-time users to do.
Specifically:

- checks out a particular branch of Spack
- deletes spurious configuration in `~/.spack` that might be
  left over from prior parts of the tutorial
- adds a mirror and trusts its public key
 2020-11-09 12:47:08 +01:00
Mark Olesen
ac8a07ef4a openfoam / openfoam-org : handle arch naming differences #19777 (#19778) 
- issue caused by the openfoam-org internal naming for their
  newly added support for aarch64

Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
 2020-11-08 20:26:51 -06:00
Michael Kuhn
0857648313 perl: make 5.32.0 the preferred version (#19799) 
Version 5.32.0 has been out for quite a while and Linux distributions
are shipping it. I have also done a rebuild of some common packages with
the new version. Let's make it the preferred version.
 2020-11-08 10:54:22 -06:00
Adam J. Stewart
1e35faa932 Bash: add new patches, maintainer (#19798) 2020-11-07 20:13:35 -06:00
mic84
765b4c5d2f amrex: new options names for version > 20.11 (#19769) 
* amrex: new options names for version > 20.11

* amrex: change option name DIM -> AMReX_SPACEDIM

* Update var/spack/repos/builtin/packages/amrex/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2020-11-07 14:10:08 -06:00
Brian Van Essen
9cd0f00607 Added code to help DiHydrogen find cuDNN and CUB (#19783) 
* Added code to help DiHydrogen find cuDNN and CUB

* Cleaning up dependencies on CUB and adding guards for when newer
versions of CUDA include CUB and it should be excluded.

* Changed Hydrogen to disable half support by default.

* Have LBANN force Hydrogen and DiHydrogen to build without half when the variant is disabled.

* Added explicit variants to enusre that if LBANN is build without Cuda,
Aluminum, or Half support, it enforces those constraints for Hydrogen
and DiHydrogen.  Cleaned up the use of Python extend versus append in
LBANN and DiHydrogen recipes.

* Fixed Flake8
 2020-11-07 14:09:00 -06:00
Michael Kuhn
887bf734e4 fdupes: new package (#19747) 2020-11-07 14:08:15 -06:00
vvolkl
1d7d4a9071 [evtgen] add env var (#19787) 
* [evtgen] add env var

* Update var/spack/repos/builtin/packages/evtgen/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2020-11-07 14:06:41 -06:00
Itaru Kitayama
e87266c646 Add the scorep package dependency. (#19742) 
Co-authored-by: Itaru Kitayama <itaru.kitayama@riken.jp>
 2020-11-06 21:18:49 -06:00
Dr. Christian Tacke
c8b92ef34b fmt: Add Version 7.1.2 (#19756) 2020-11-06 21:12:45 -06:00
Dr. Christian Tacke
3b4558fe6c fairlogger: Add Version 1.9.0 (#19758) 2020-11-06 21:12:19 -06:00
Chen Wang
d085d53ebc New version of Recorder: 2.1.6 (#19760) 2020-11-06 21:11:49 -06:00
eugeneswalker
fbc7cefcf7 make TIMER compatible with LLVM F18 (#19765) 2020-11-06 21:11:13 -06:00
Thomas Madlener
381305da0f [root] fix package definition (#19775) 2020-11-06 21:04:23 -06:00
darmac
1d52bbdf17 Add new package: predixy (#19776) 2020-11-06 21:03:33 -06:00
Andrew W Elble
dcf3d8332a cp2k: fix lmax variant to use tuple (#19780) 
* cp2k: fix lmax variant to use tuple

discovered during testing #19501

@dev-zero

* retain conversion to string
 2020-11-06 20:58:38 -06:00
Cyrus Harrison
ef9b8da282 add new vtk-h versions (#19785) 2020-11-06 20:53:36 -06:00