Commit Graph

16 Commits

Author SHA1 Message Date
Todd Gamblin
54f97d1dec
Update copyright on LLNL files for 2018. (#7592) 2018-03-24 12:13:52 -07:00
Ben Boeckel
22df09315f Re-add list_url for all R packages (#6110)
* r-igraph: find old packages in the archive

Fixes #6104.

* r-irlba: find old packages in the archive

Fixes #6101.

* r-lazyeval: find old packages in the archive

Fixes #6102.

* packages: set list_url for all packages hosted on CRAN

* packages: consistently use the CRAN archive URLs
2017-11-05 13:42:24 -08:00
Todd Gamblin
05fa302655
Replace github.com/llnl/spack with github.com/spack/spack (#6142)
We moved to a new GitHub org! Now make the code and docs reflect that.
2017-11-04 17:08:04 -07:00
Michael Kuhn
84ae7872d3 Update copyright notices for 2017 (#5295) 2017-09-06 17:44:16 -10:00
Todd Gamblin
cac4362f64 Make LICENSE recognizable by GitHub. (#4598) 2017-06-24 22:22:55 -07:00
Adam J. Stewart
36b8ea2f92 Add default list_url for GitLab, BitBucket, and CRAN (#4439)
* Add default list_url for GitLab, BitBucket, and CRAN

* Fix flake and doc tests
2017-06-09 12:28:39 -05:00
Elizabeth Fischer
402dfe30f9 Get Rid of nobuild, nolink, and alldeps (#2765)
* Removing the nobuild, nolink, and alldeps dependency types in favor of being explicit.
* This will help with maintenance going forward, as adding more dependency types won't affect existing declared dependencies in weird ways.
* default deptype is still `('build', 'link')`
2017-01-07 19:59:02 -08:00
Adam J. Stewart
daff3c0908 Preliminary RPackage class (#2761) 2017-01-07 16:28:52 -08:00
Elizabeth Fischer
3dd4a01a5e Standardize package names: lower-case, not Mixed_CASE (#2475)
* Rename packages

* Upcasing depends_on() in packages.

* Downcased extends('r')

* Fixed erroneously changed URL that had slipped through.

* Fixed typo

* Fixed link from documentation into package source code.

* Fixed another doc problem.

* Changed underscores to dashes in package names.

* Added test to enforce lowercase, no-underscore naming convention.

* Fix r-xgboost

* Downcase more instances of 'R' in package auto-creation.

* Fix test.

* Converted unit test packages to use dashes not underscores

* Downcase `r` in the docs.

* Update module_file_support.rst

Fix r->R for class R.
2017-01-04 18:24:07 -08:00
Glenn Johnson
a8855f48aa Add dependency type tp r- packages
This PR adds the `nolink` dependency type to r- package dependencies.
This is needed due to the new dependency types in Spack. A couple of
packages were updated with new versions as well.
2016-07-23 19:43:55 -05:00
Glenn Johnson
a813f03955 Add list_url for old versions. 2016-06-16 23:08:55 -05:00
Glenn Johnson
7213b12324 Tweak how R packages are built.
Add bzip2 as a dependency to base R.

Switch from installing the R packages from tar files to installing from
the extracted directory. This is more in line with a standard install
and also allows installing from VCS.

Use the Bioconductor version for BiocGenerics and future Bioconductor
packages. Suffix the package with 'bioc-$version' to indicate which
Bioconductor release the package is a part of. This is actually more
important than the actual version attached to individual packages
although those are subject to change within the Bioconductor branch.
2016-06-16 23:08:55 -05:00
Glenn Johnson
cb3505769b Clean up R extensions
Run the existing R extension packages through autopep8 to clean up.
2016-06-16 23:07:13 -05:00
Todd Gamblin
e7ced54369 Correct LLNL LGPL license template for clarity. 2016-05-11 21:22:25 -07:00
Glenn Johnson
2b7b7f6d97 Reformat description text. 2016-04-24 18:11:18 -05:00
Glenn Johnson
fbabfc593d Make R extensable and add a couple of packages for verification.
Added R as a build system so that the create template will have the
correct configure line.
Added a regex for version parsing as the R URLs are a little odd.
2016-04-06 16:44:22 -05:00