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Author SHA1 Message Date
Glenn Johnson
13de22a198 New package: mysqlpp (mysql++) (#22877) 2021-04-13 17:31:25 -07:00
arjun-raj-kuppala
f76952572f AMD ROCm 4.1.0 release: Bump up the version of migraphx recipe (#22889) 
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2021-04-14 01:22:46 +02:00
Glenn Johnson
dca4893c11 New package: lp-solve (#22876) 2021-04-13 15:48:40 -07:00
Glenn Johnson
7960c05922 mariadb-c-client: fix location of libraries (#22873) 
Override 'libs' property to search for expected library name:
default Spack implementation can only locate libraries if they
match the package name.
 2021-04-13 15:48:01 -07:00
Glenn Johnson
757528d5fb genemark-et package: add version 4.65 and new dependencies (#22966) 
New version has new dependencies (which are also added here as new
packages):

* perl-mce
* perl-threads
* perl-thread-queue

The new version of genemark-et also has a different URL scheme.
 2021-04-13 15:02:21 -07:00
Tamara Dahlgren
0618b43847 rdma-core bugfix: help CMake find Python dependency (#22891) 2021-04-13 14:48:20 -07:00
Sergey Kosukhin
1379bcf680 eccodes: add version 2.21.0 (#22901) 
The CMake option ENABLE_PYTHON has been renamed to ENABLE_PYTHON2
starting version 2.20.0
 2021-04-13 14:34:10 -07:00
Andrew W Elble
c98a0f0bb2 elmerfem: add version 9.0; fix version 8.4; add +gui variant (#22931) 
* Add a +gui variant (default off) which adds dependencies on
  qt, paraview, and qwt
* Backport upstream patch when installing version 8.4 (this patch
  is already applied for versions >= 9.0)
 2021-04-13 14:31:39 -07:00
Jen Herting
29f748993d New package: r-tester (#22945) 
Co-authored-by: Alex C Leute <aclrc@rit.edu>
 2021-04-13 14:19:15 -07:00
Glenn Johnson
ab87f7451a BRAKER package: Add version 2.1.6 (#22965) 2021-04-13 14:18:07 -07:00
Robert Mijakovic
1f91409368 git: add version 2.31.1 (#22974) 2021-04-13 13:59:31 -07:00
Robert Mijakovic
a7547d8ee9 Python: add versions 3.8.9, 3.9.4 (#22975) 2021-04-13 13:58:59 -07:00
Tiziano Müller
c6a08981a7 gaussian-view/vmd: add deps on X11/GL libraries (#22322) 
Both binary packages would otherwise require X11 and Mesa libraries to
be installed on the host to run. Make sure they use the Spack-provided
libraries by patching the `rpath` via `patchelf`.
 2021-04-13 13:42:00 -07:00
Tiziano Müller
dee030618f Documentation: update intel-parallel-studio instructions (#22248) 
* Clarify stub compiler definition in compilers.yaml
* Update explanation of why stub compiler definition is needed
* Add note about required module definition when using Spack-installed
  intel-parallel-studio as intel-compiler
* Add suggestion about updating package config preferences based on
  choice of variants when installing intel-parallel-studio to avoid
  reinstallation
 2021-04-13 13:31:14 -07:00
shanedsnyder
c801b0cb40 add darshan 3.3.0-pre1 pre-release (#22942) 2021-04-13 19:44:42 +00:00
G-Ragghianti
f2169e1f17 netlib-lapack: New versions (#22964) 2021-04-13 12:34:09 -07:00
Gregory Lee
6054a97d0a added dyninst 11.0.0 (#22949) 2021-04-13 12:14:06 -07:00
mic84
cb53259306 amrex: allow builds with clang and apple-clang (#22967) 2021-04-13 11:18:19 -07:00
Vicente Bolea
e020f343de VTKM: change preferred version (#22950) 2021-04-13 11:14:15 -07:00
Glenn Johnson
7a224c583a bcftools: add v1.12 (#22883) 2021-04-13 12:04:16 -06:00
Glenn Johnson
43ece950e5 htslib: add version 1.12 (#22882) 2021-04-13 10:56:48 -07:00
Harmen Stoppels
17ea01fbce bump cmake (#22961) 2021-04-13 09:46:19 -07:00
Adam J. Stewart
af52b8e29e py-pandas: add v1.2.4 (#22944) 2021-04-13 16:39:47 +00:00
Sreenivasa Murthy Kolam
6c632dad71 changes to enable rocm builds using git repo (#22943) 2021-04-13 15:36:34 +00:00
Harmen Stoppels
e7d392c49a Fix issue where binutils builds ld with ~ld (#22959) 
Let's be very explicit and always add --enable or --disable.
 2021-04-13 16:31:44 +02:00
Matthieu Dorier
e320b1d7e4 berkeley-db: making +cxx and +stl default to True (#22960) 2021-04-13 13:18:28 +00:00
Simon Frasch
c11af21da2 spfft: add version 1.0.2 (#22958) 2021-04-13 13:35:37 +02:00
Tiziano Müller
a580788d86 intel-parallel-studio: fix vtune installation for 2020+ (#22255) 
vtune_amplifier got renamed to vtune_profiler for the 2020+ suite
 2021-04-13 13:01:58 +02:00
Harmen Stoppels
0b9bd92511 SIRIUS and SpFFT versions need ROCm < 4.1 (#22957) 
FindHIP.cmake script is not working for both 4.0 and 4.1.

It's fixed in their develop branches
 2021-04-13 11:58:19 +02:00
Tiziano Müller
1f1b568e95 spglib: fix libs property for some multilib distros (#22956) 
on multilib distros with lib/lib64 (rather than lib32/lib) the library ends up in a dir lib64/ instead of lib/, breaking the libs property (and the cp2k+spglib build)
 2021-04-13 11:01:15 +02:00
yellowhat
bff713aeb2 gcc: add v10.3 (#22894) 2021-04-13 08:14:43 +00:00
Jen Herting
85e70600ed New package: r-tictoc (#22937) 2021-04-12 21:53:36 +00:00
Robert Mijakovic
a7d7f4e98a vtk: new version, 9.0.1 (#22880) 
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
 2021-04-12 15:52:07 -06:00
Jen Herting
62e256d995 New Package: r-assertive-types (#22933) 2021-04-12 21:48:13 +00:00
Harmen Stoppels
782a7dc690 Add new versions of patchelf (#22939) 2021-04-12 21:42:38 +00:00
Asher Mancinelli
e30aff9b6b Bump hiop version (#22884) 2021-04-12 14:30:46 -07:00
Glenn Johnson
976cf4496b samtools: add version 1.12 (#22885) 2021-04-12 14:28:04 -07:00
arjun-raj-kuppala
24f4a39d0e ROCm relase 4.1.0: Bump up version of rocm-validation-suite (#22946) 2021-04-12 20:46:10 +00:00
Pramod Kumbhar
96c984e0ce Add conflict for Mac OS for STAT package (#22919) 
See https://github.com/LLNL/STAT/issues/19
 2021-04-12 12:14:15 -07:00
jthies
087015e1ac packages/phist: new version 1.9.4 (#22922) 
fix version 1.7.4 checksum
re 22758: phist-1.9.4 should resolve this issue, once confirmed I will add a patch for older versions.
 2021-04-12 11:18:01 -07:00
Axel Huebl
982d3abcfd openPMD-api: 0.13.3 (#22910) 2021-04-12 18:10:52 +02:00
Peter Scheibel
51df9b0c9c Externals with merged prefixes (#22653) 
We remove system paths from search variables like PATH and 
from -L options because they may contain many packages and
could interfere with Spack-built packages. External packages 
may be installed to prefixes that are not actually system paths 
but are still "merged" in the sense that many other packages are
installed there. To avoid conflicts, this PR places all external
packages at the end of search paths.
 2021-04-12 11:19:29 +02:00
Glenn Johnson
0b472a91d1 maker: add v3.01.03 (#22915) 2021-04-12 11:15:03 +02:00
Chris White
edcd0703df blt: add v0.4.0 (#22917) 2021-04-12 11:14:05 +02:00
Glenn Johnson
7c06b472f5 bart: update package (#22926) 
- add version 0.7.00
- make build work with intel-oneapi-mkl
- Add myself as maintainer
 2021-04-12 11:05:53 +02:00
Martin Pokorny
e3b0d7ce0e casacore: change FFT variants for correct, version dependent, FFT choices (#22925) 
Required dependency on FFTW for casacore@3.4.0:; optional for
casacore@:3.4.0, depending selection of FFTPack
 2021-04-12 11:03:24 +02:00
Glenn Johnson
e27aa39427 mumax: constrain go version (#22927) 
Mumax will not build with go-1.16.
 2021-04-12 11:01:27 +02:00
Seth R. Johnson
b7f74f6ef6 qt: restrict python version when +webkit (#22928) 
See #17270.

```
make[2]: Entering directory `/tmp/vavolkl/spack-stage/spack-stage-qt-5.14.2-63dapppjbq6vqh3le7pazsprijls7cfl/spack-src/qtwebengine/src'
/bin/sh: -c: line 0: syntax error near unexpected token `('
/bin/sh: -c: line 0: `echo Modules will not be built. Python version 2 (2.7.5 or later) is required to build QtWebEngine.'
make[2]: *** [errorbuild] Error 1
```
 2021-04-12 11:00:32 +02:00
thelfer
9e702a3d44 tfel: add missing variant (#22558) 
The variant was used but not defined.
 2021-04-12 06:58:10 +00:00
Martin Pokorny
06f291a3cd libsakura: Change precision for fftw dependency depending on libsakura version (#22924) 
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2021-04-12 08:38:18 +02:00