Commit Graph

17928 Commits

Author SHA1 Message Date
Daniele Cesarini
a36a5ab624 fleur: new package (#26631) 2021-10-12 02:31:23 +02:00
Todd Kordenbrock
af2ecf87d4 Faodel: Update for the v1.2108.1 release (#26516) 2021-10-11 23:17:42 +00:00
Valentin Volkl
a0b9face0d frontier-client: add missing openssl dependency (#26636) 2021-10-12 01:02:12 +02:00
Kevin Pedretti
0b62974160 openblas: fix build on riscv64 (#26565)
OpenBLAS now has support for the riscv64 architecture. This commit
extends the spack openblas package.py to handle building on riscv64.
2021-10-12 00:55:45 +02:00
Alan Sill
833f1de24a bcl2fastq2: add boost@1.55 as default boost dependency (#26655)
When PR #26659 is merged, boost version boost@1.54.0 will be available for build too.

Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
2021-10-11 22:21:17 +00:00
Bernhard Kaindl
4eb176b070 motif package: fix linking the simple_app demo program (#26574) 2021-10-11 15:00:42 -07:00
Desmond Orton
95e63e0c29 New Package Qualimap:2.2.1 (#26615)
Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
2021-10-11 19:28:34 +00:00
Derek Ryan Strong
2644a15ff9 GNU parallel package: add version 20210922 (#26591) 2021-10-11 12:08:06 -07:00
Marie Houillon
c7785b74be openCARP packages: add version 8.1 (#26602) 2021-10-11 12:07:05 -07:00
Bernhard Kaindl
260f4ca190 mapserver: Add missing deps: giflib and postgresql (#26619) 2021-10-11 12:04:18 -07:00
Seth R. Johnson
8f62039d45 llvm: add conflict for newer apple-clang versions (#26633) 2021-10-11 17:49:23 +02:00
Bernhard Kaindl
2e9512fe8b mesa: gallium fails with llvm@13: use 'llvm@6:12', add mesa@21.2.3 (#26627)
The software rasterizer of Mesa's Gallium3D(even @21.2.3) fails to
build with llvm@13.0.0, use: depends_on('llvm@6:12', when='+llvm')
2021-10-11 17:34:33 +02:00
Matthew Archer
e034930775 kahip: update build system to cmake for v3.11, retain scons for older versions (#25645)
* kahip: update to cmake for v3.11, retain scons for older versions

* kahip: update build system to cmake for v3.11, retain SCons for older versions

* address PR comments and add maintainer

* address PR comments - correct version to 2.10, add deprecated and url, and remove scons version
2021-10-11 10:20:43 -05:00
Daniele Cesarini
79aba5942a Update of siesta libs (#26489) 2021-10-11 09:09:39 -05:00
iarspider
78200b6b41 Add new versions of kiwisolver (#26597) 2021-10-11 09:09:01 -05:00
iarspider
ad75f74334 New package: py-cppy (required for py-kiwisolver) (#26645) 2021-10-10 17:14:20 -05:00
Manuela Kuhn
4e1fdfeb18 py-nilearn: add 0.4.2 and 0.6.2 (#26635) 2021-10-09 19:14:13 -05:00
Manuela Kuhn
7f46b9a669 py-pyvistaqt: add new package (#26637) 2021-10-09 21:00:00 +00:00
Michael Kuhn
5deb8a05c4 environment-modules: fix build (#26632)
PR #25904 moved the `--with-tcl` option to only older versions. However,
without this option, the build breaks:
```
checking for Tcl configuration... configure: error: Can't find Tcl configuration definitions. Use --with-tcl to specify a directory containing tclConfig.sh
```
2021-10-09 12:43:54 -05:00
Bernhard Kaindl
9194ca1e2f idna: Add versions 2.9 for sierrapy #23768 and 3.2(current) (#26616)
py-sierrapy was merged accidentally and pins its versions to exact
numbers. Add 2.9 as the version for sierrapy and the current 3.2
2021-10-09 11:31:11 -05:00
Joseph Wang
e6cc92554d py-awkward: add py-yaml as depends (#26626) 2021-10-09 17:35:22 +02:00
Joseph Wang
03ab5dee31 evtgen: fix pythia typo (#26625) 2021-10-09 16:11:58 +02:00
Bernhard Kaindl
93df47f4d5 librsvg: fix build when does not use -pthread for linking (#26592)
librsvg uses pthread_atfork() but does not use -pthread on Ubuntu 18.04 %gcc@8
2021-10-09 13:10:13 +02:00
Derek Ryan Strong
4b5cc8e3bd Add R 4.1.1 (#26589) 2021-10-08 20:02:03 -05:00
Derek Ryan Strong
e89d4b730a Add Julia 1.6.3 (#26624) 2021-10-09 00:58:19 +00:00
Bernhard Kaindl
21ce23816e py-twisted,py-storm: dep on zope.interface, bump storm version (#26610)
* py-twisted,py-storm: dep on zope.interface, bump storm version

py-twisted and py-storm's import tests need zope.interface.
py-storm: Use pypi and add version 0.25. It didn't change reqs.
zope.infterface@4.5.0 imports removed Feature: Use setuptools@:45

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-storm: all deps updated with type=('build', 'run')

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-10-08 21:20:39 +00:00
psakievich
8ebb705871 Trilinos: update for CUDA and Nalu-Wind (#26614) 2021-10-08 21:08:54 +00:00
Bernhard Kaindl
7e8f2e0c11 py-hypothesis: Add variants django, dumpy, pandas and fix import tests (#26604) 2021-10-08 21:00:47 +00:00
Manuela Kuhn
654268b065 py-bcrypt, py-bleach, py-decorator, py-pygdal: fix python dependency (#26596)
* py-bcrypt, py-bleach, py-decorator, py-pygdal: fix python dependency

* Update var/spack/repos/builtin/packages/py-bleach/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-10-08 15:56:22 -05:00
Bernhard Kaindl
6d0d8d021a py-pymatgen: fix build of old versions, bump version to 2021.3.9 (#26249)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-10-08 19:54:40 +00:00
Bernhard Kaindl
f1f614ee9f py-anytree: Add dep py-six@1.9.0 as required by setup.py (#26603)
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-10-08 19:36:12 +00:00
Manuela Kuhn
88c33686fd py-matplotlib: fix 3.4.3 (#26586)
* py-matplotlib: fix 3.4.3

* Update var/spack/repos/builtin/packages/py-matplotlib/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-10-08 13:52:10 -05:00
Bernhard Kaindl
de86726483 py-traceback2: Fix depends_on: add six and py-linecache2 (#26607) 2021-10-08 13:35:36 -05:00
Bernhard Kaindl
a95c1dd615 py-keras-preprocessing: Add missing deps: six@1.9.0: and numpy@1.9.1: (#26605)
* py-keras-preprocessing: Add missing deps: six@1.9.0: and numpy@1.9.1:

Add deps: pip download --no-binary :all: keras-preprocessing==1.1.2
Collecting numpy>=1.9.1
  Installing build dependencies: started
Collecting six>=1.9.0

* Update var/spack/repos/builtin/packages/py-keras-preprocessing/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-10-08 13:34:25 -05:00
Manuela Kuhn
32b35e1a78 py-neurora: add new package (#26479) 2021-10-08 13:39:45 +00:00
Rodrigo Ceccato de Freitas
169d0a5649 cling: add missing CMake dependency (#26577) 2021-10-08 09:28:37 +02:00
Bernhard Kaindl
449a5832c8 llvm: llvm@13+libcxx needs a very recent C++ compiler (#26584)
libc++-13 does not support %gcc@:10, see:
https://bugs.llvm.org/show_bug.cgi?id=51359#c1

https://libcxx.llvm.org/#platform-and-compiler-support says:
- GCC    11     - latest stable release per GCC’s release page
- Clang: 11, 12 - latest two stable releases per LLVM’s release page
- AppleClang 12 - latest stable release per Xcode’s release page
2021-10-08 00:25:51 +00:00
Pedro Demarchi Gomes
28529f9eaf re2 pic support (#26513) 2021-10-08 01:01:40 +02:00
Oliver Perks
da31c7e894 Updatepackage/minigmg (#26467)
* MiniGMG, add support for optimised flags + SIMDe implementation of AVX instrinsics

* Add .gitlab-ci.yml

* NVHPC fast

* remove CI

* Syntax fix
2021-10-07 14:49:14 -05:00
Seth R. Johnson
9853fd50e2 itk: use CMakePackage helpers (#26572) 2021-10-07 10:49:51 -05:00
Kevin Huck
b33a0923e1 apex: support profiling/tracing HIP applications (#26569)
libz is added for compressing google trace events output.
2021-10-07 16:22:40 +02:00
Olivier Cessenat
20ee786d09 visit: add an external find function (determine_version) (#25817)
* visit: add an external find function (determine_version)

* visit: correct too long comment line

* visit: forgot to set executables

* visit: external find uses signgle dash version

* visit: found as external asking visit version
2021-10-07 10:19:58 +00:00
Manuela Kuhn
653d5e1590 py-mayavi: add 4.7.3 (#26566) 2021-10-06 19:15:34 -05:00
Tyler Funnell
60909f7250 fish: adding version 3.3.1 (#26488)
* fish: adding version 3.3.1

* adding maintainer

* Update var/spack/repos/builtin/packages/fish/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-10-06 20:42:45 +00:00
Manuela Kuhn
b787065bdb py-scikit-image: add 0.18.3 and fix dependencies (#26406) 2021-10-06 15:30:27 -05:00
Jen Herting
3945e2ad93 New package: py-clean-text (#26511)
* [py-clean-text] created template

* [py-clean-text]

- added description
- added dependencies
- removed fixmes
2021-10-06 19:44:33 +00:00
Kevin Pedretti
cb5b28392e Patch from upstream needed to build numactl on riscv64. (#26541)
The most recent release of numactl (2.0.14) fails to build on riscv64
because of a missing "-latomic". This patch from upstream resolves this
issue. It can be dropped once the next version of numactl is released.
2021-10-06 11:50:21 -07:00
Rodrigo Ceccato de Freitas
b1f7b39a06 ucx: fix typo in config description (#26564) 2021-10-06 18:44:22 +00:00
Manuela Kuhn
770c4fd0b2 py-nipype: add 1.4.2 (#26472) 2021-10-06 20:35:42 +02:00
Jose E. Roman
fdf76ecb51 New release slepc4py 3.16.0 (#26468) 2021-10-06 11:18:53 -07:00