Commit Graph

19 Commits

Author SHA1 Message Date
Douglas Duckworth
54e1d57647 added relion 3.0.8 [latest stable version in 3.0 branch] as well as 3.1_beta (#13539)
* added relion 3.0.8 [latest stable version in 3.0 branch] as well as 3.1_beta

* relion 3.1 beta compiles without Benchmarking build type see https://github.com/3dem/relion/issues/533

* relion 3.0.X - 3.1 now supports latest cmake@3
2019-11-05 12:40:27 -06:00
Massimiliano Culpo
fd97f5c491
Fixed constraints in recipes for packages that depends on fftw (#13125) 2019-10-11 07:55:15 +02:00
Douglas Duckworth
ec29461632 added relion 3.0.7 - removed deprecated versions (#12101)
* relion - added v 3.0.7 and removed deprecated versions that have inferior performance

* relion 3.0.7 does require cuda 9 or above
2019-07-23 18:13:00 -05:00
Douglas Duckworth
27b07811dd RELION package: add version 3.0.6 (#11851) 2019-06-26 09:57:14 -07:00
Todd Gamblin
6f50cd52ed copyright: update license headers for 2013-2019 copyright. 2019-01-01 00:44:28 -08:00
Todd Gamblin
eea786f4e8 relicense: replace LGPL headers with Apache-2.0/MIT SPDX headers
- remove the old LGPL license headers from all files in Spack
- add SPDX headers to all files
  - core and most packages are (Apache-2.0 OR MIT)
  - a very small number of remaining packages are LGPL-2.1-only
2018-10-17 14:42:06 -07:00
Douglas Duckworth
be11608732 added relion version 3 (beta) (#8872)
* added relion 3 beta - WIP

* added relion 3 beta - WIP

* more relion changes - still WIP

* more changes for relion

* more changes

* now correctly handling cuda_arch

* now correctly handling cuda_arch

* fixed flake8 syntax errors

* fixed flake8 syntax errors

* merge

* fixed flake8 errors again

* relion 3 finished

* added print message to cuda_arch exception

* relion - shortened explination

* still need tag=2.0.3 for v 2.0.3 - removed @develop since it no longer exists

* correct cuda versions now used properly

* relion 3 done

* added tags back

* fixed exception message

* relion - added develop back as master
2018-08-16 10:51:58 -05:00
Adam J. Stewart
3f18c04865 Add top-level attributes for git R-Z packages 2018-07-25 23:10:10 -07:00
Todd Gamblin
54f97d1dec
Update copyright on LLNL files for 2018. (#7592) 2018-03-24 12:13:52 -07:00
Douglas Duckworth
0f114d9718 Relion 2.1 - Using CudaPackage class (#6707) 2018-03-07 07:45:48 +01:00
Douglas Duckworth
d3519af7de relion - added new stable version 2.1 (#6706) 2017-12-18 10:38:20 -08:00
Douglas Duckworth
5a66065dfa relion: add version and cuda arch variant (#6317)
Add preferred version 2.0.3. Added beta version. Added conflict with
gcc versions >= 5 when building with cuda@8 (which is currently the
only supported cuda version). Added cuda architecture variant. Added
comment about current lack of cuda@9 support.
2017-12-13 10:30:38 -08:00
Douglas Duckworth
c7d2b4dbd6 relion 2.1 - update variant defaults (#6201)
Default precision should be double for CPU. Generally users also want
to use GPUs so the +cuda variant is now also enabled by default.
2017-11-13 12:29:43 -08:00
Douglas Duckworth
ccc51cea7d added relion v 2.1 (#6023)
* added relion v 2.1

* relion 2.1 - misssed comma

* relion now pulling from master branch - removed 2.03 - added cuda 8 as dependency given 9 does not yet work with relion per https://github.com/3dem/relion/issues/296
2017-11-05 15:01:21 -08:00
Todd Gamblin
05fa302655
Replace github.com/llnl/spack with github.com/spack/spack (#6142)
We moved to a new GitHub org! Now make the code and docs reflect that.
2017-11-04 17:08:04 -07:00
Michael Kuhn
84ae7872d3 Update copyright notices for 2017 (#5295) 2017-09-06 17:44:16 -10:00
Adam J. Stewart
07aec4366f Add universal build_type variant to CMakePackage (#4797)
* Add universal build_type variant to CMakePackage
* Override build_type in some packages with different possible values
* Remove reference to no longer existent debug variant
* Update CBTF packages with new build_type variant
* Keep note on build size of LLVM
2017-07-25 16:34:43 -07:00
Todd Gamblin
cac4362f64 Make LICENSE recognizable by GitHub. (#4598) 2017-06-24 22:22:55 -07:00
Jeffrey Salmond
510d725b64 add relion package (#4020)
* add relion package

* fix flake8

* add licence
2017-04-27 16:52:05 -05:00