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Author SHA1 Message Date
Erik Schnetter
b00080d2da ssht: Install include files into "include/ssht" (#16879) 2020-05-30 21:08:18 -05:00
Adam J. Stewart
9eebc6b4c1 horovod: added v0.19.4 (#16878) 2020-05-30 20:22:00 +02:00
Adam J. Stewart
d76eb1fa51 Pandas: add 1.0.4 (#16877) 2020-05-30 11:09:10 -05:00
noguchi-k
816f780be8 revocap-refiner: add space and remove unused function. (#16861) 2020-05-30 10:57:12 -05:00
darmac
7a363e2a3f Add new package: netkit-ftp (#16876) 
* Add new package: netkit-ftp

* remove parallel constraint
 2020-05-30 10:47:47 -05:00
Jen Herting
3a66d0773c perl-bioperl: fixed version 1.007002 (#16826) 
* [perl-bioperl] fixed url for version 1.007002
* [perl-bioperl] fixed conditional method directives
 2020-05-30 00:17:01 -07:00
Amjad Kotobi
857d2c9150 r-lfe: New package 2020-05-30 00:15:50 -07:00
Michael Kuhn
3cc0e1a333 cpio: add patch to fix build with gcc@10: (#16844) 2020-05-30 00:14:57 -07:00
Amjad Kotobi
58cc75ac29 git-lfs: add versions 2.10.0, 2.11.0 (#16850) 2020-05-30 00:14:24 -07:00
Ben Morgan
c35ced1465 geant4: New version 10.6.2 (#16868) 
Update both main and data packages. Data versions have not changed
in new version.

Provide new python variant to build Python bindings for 10.6.2 and
newer. Add dependencies on python and Boost+python required by variant.
 2020-05-30 00:13:24 -07:00
Sergey Kosukhin
9d1f71e89f repo: fix construction of UnknownPackageError (#16865) 
Also improve the error messages
 2020-05-29 20:07:44 +02:00
Nicholas Sly
ec5959694c Add netcdf-c~parallel-netcdf variant specification to netcdf-fortran~mpi. (#16671) 
Co-authored-by: sly <sly@lanl.gov>
 2020-05-29 09:48:03 -07:00
Christoph Junghans
11fc6c5791 examinimd/miniaero: fix build with kokkos-legacy (#16867) 
* examinimd/miniaero: fix build with kokkos-legacy

* flake8
 2020-05-29 10:17:55 -06:00
Robert Rosca
edd075a5e1 Mention that packages can be uninstalled by hash (#16863) 2020-05-29 13:23:02 +02:00
Greg Becker
bd95b7df86 spack module_cmd: set LD_LIBRARY_PATH for python in subshell. (#16827) 
* Ensure python runs with proper ld_library_path within Spack regardless of environment
 2020-05-29 11:57:21 +02:00
Jane Herriman
6af3272e1d Update error message when UnavailableCompilerVersionError is triggered (#16838) 
Co-authored-by: Herriman <herriman1@panorama.llnl.gov>
 2020-05-29 10:53:43 +02:00
Greg Becker
a21fab6fe4 compilers: add opt_flags and debug_flags properties (#16710) 2020-05-29 10:52:31 +02:00
0t1s1
2aca0cf565 gridlab-d: added new package. (#16816) 2020-05-29 09:37:12 +02:00
Greg Becker
38ac78489a bugfix: use flags when computing implicit rpaths (#16634) 
* make verbose_flag a property

* tests
 2020-05-28 17:11:28 -07:00
Christoph Junghans
623cc7427e legion: add v20.03.0 (#16848) 2020-05-28 14:58:55 -06:00
Marc Allen
712fc696ba npm: use mkdirp instead of mkdir (#16835) 
fixes #16833

Co-authored-by: Marc Allen <mrcall@amazon.com>
 2020-05-28 12:33:09 +02:00
Luca Heltai
a6779061d7 dealii: deal with nanoflann after 9.2.0 (#16839) 2020-05-28 12:02:34 +02:00
Adam J. Stewart
4351c2eb32 Update checksum for PyTorch patch (#16837) 2020-05-28 11:27:59 +02:00
Toyohisa Kameyama
ab65a8ee27 opencv: fix to build version 3.2.0 with Fujitsu compiler (#16840) 2020-05-28 11:23:15 +02:00
Joseph Ciurej
87cd375559 ffmpeg: add a maintainer to the package (#16830) 2020-05-27 22:51:19 +02:00
Toyohisa Kameyama
4d5a68731a ffmpeg: set compilers command. (#16799) 2020-05-27 21:04:37 +02:00
Massimiliano Culpo
8f208b17e2 spack containerize: allow 0.14.3 tag for next release 2020-05-27 10:21:14 -07:00
Massimiliano Culpo
187cb51b49 spack containerize: allow 0.14.1 and 0.14.2 tags 
fixes #16727
 2020-05-27 10:21:14 -07:00
Tom Payerle
6ddc077e08 libxv: videoproto is a build and link dependency (#16821) 
fixes #16820

Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2020-05-27 16:34:15 +02:00
Sergey Kosukhin
e73c39a5db concretize: fix UnboundLocalError due to import within a function (#16809) 2020-05-27 11:45:14 +02:00
Jen Herting
d8c7073a9f py-configargparse: new package at v1.2.3 (#16814) 2020-05-27 09:45:14 +02:00
Jen Herting
768419601d py-fits-tools: added package at v1.1.2 (#16815) 2020-05-27 09:43:26 +02:00
Tomoki, Karatsu
6b8775f6af py-torch: find openmp when %fj (#16822) 
Fix for 'FindOpenMP.cmake' to detect openmp 
settings used by Fujitsu compiler.
 2020-05-27 09:32:11 +02:00
Justin S
fcacf8dc9d plink-ng: new package at v200511 (#16750) 
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
 2020-05-27 09:20:27 +02:00
Christoph Junghans
ac7f6b98b5 quicksilver: initial commit (#16811) 2020-05-27 09:06:25 +02:00
Greg Becker
e9dcab9464 backwards compatibility for naming scheme (#16812) 
* backwards compatibility for naming scheme
 2020-05-26 14:06:25 -07:00
Massimiliano Culpo
c01433f60a spack.relocate: further coverage for ELF related functions (#16585) 
* make_link_relative: added docstring

* make_elf_binaries_relative: added docstring, unit tests

* raise_if_not_relocatable: added docstring, added unit test for exceptional case

* relocate_links: removed unused arguments, added docstring and comments

Also fixed a possible bug that was issuing spurious
warning when a file was relocated successfully

* relocate_text: added docstring and comments, renamed arguments

* relocate_text_bin: added docstring and comments, renamed arguments, unit tests
 2020-05-26 11:47:31 -07:00
Mark Olesen
0b96082e74 openfoam: improve handling of wmake rules, version update 
- add future-proofing for wmake rules locations:
  Accept wmake/rules/{ARCH}{COMP} or wmake/rules/{ARCH}/{COMP}

- compiler option is now '-spack' instead of 'RpathOpt'
  which now seems to be a bit harsh on the eyes.
  Now have compilations such as 'linux64GccDPInt32-spack',
  which is moderately easier to read.

- add OpenFOAM 1912, patch 200506

STYLE: adjust for new flakey8 indentation rules
 2020-05-26 10:55:56 -07:00
Dr. Christian Tacke
2c6406c003 grpc: allow building shared libraries (#16356) 2020-05-26 16:30:18 +02:00
darmac
d7fb8701c2 su2: new package at v7.0.3 (#16787) 2020-05-26 11:17:25 +02:00
darmac
7383d923f0 blogbench: added new package at v1.1 (#16793) 2020-05-26 11:16:43 +02:00
iarspider
45b86e2c1d py-hypothesis: added v5.3.0 (#16804) 2020-05-26 09:42:54 +02:00
Sergey Kosukhin
ff44a6d03f hdf: new version, variants and refactoring (#16469) 
* hdf: new version, variants and refactoring.

* libc provides rpc

* Fix szip-related configure argument.

* Update dependent packages.
 2020-05-25 19:20:04 -05:00
Sergey Kosukhin
15d2883abe openmpi: get rid of implicit system dependencies (#16758) 
* openmpi: get rid of implicit system dependencies

* Python 2 compatibility.

* Rename pbspro to openpbs and revert packages.yaml.

* Remove virtual package 'sendmail'.
 2020-05-25 19:14:47 -05:00
iarspider
3c36a7caab py-moreitertools: added v7.0.0 (#16802) 2020-05-25 22:18:40 +02:00
Amjad Kotobi
e90f51a802 r-spatialeco: New package (#16744) 2020-05-25 13:19:51 -05:00
Michael Kuhn
f12ae1bcd0 Fix typo for allow_sgid (#16806) 
fixes #14425

The config: prefix should be included in the actual option name and
makes it impossible to change this option.
 2020-05-25 18:49:35 +02:00
Stephen Herbein
c4031f0455 lua: fix compilation on Cray (#16713) 
Problem: when calling `static_to_shared_library` on the `cray` arch, it
produces a non-sensical compiler command with no input files.  For
example, when installing lua@5.2.4, it produced:
'gcc -lm -ldl -o /big-long-spack-path/liblua.so.5.2.4'

Solution: do the same thing on `cray` that is done for `linux`
 2020-05-25 15:18:47 +02:00
Tom Payerle
17e4a72191 netcdf-cxx4: remove erroneous variants (#16762) 
fixes #16725

The dap, jna, pnetcdf, netcdf4, and ncgen4 variants added in #16047
are _not_ supported by the configure script for netcdf-cxx4 package 
(These appear to be configure args for netcdf-c package).
 2020-05-25 15:15:30 +02:00
Peter Scheibel
768fa6bc53 bugfix: schema errors without line numbers (#16765) 
* account for schema validation errors where the associated instance doesn't have a line number

* fix unrelated flake error (but it must be fixed because this PR touches this file and the flake rules have been updated since the last edit to this file)
 2020-05-25 15:08:47 +02:00