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94 Commits

Author SHA1 Message Date
Denis Davydov
46433b9eb3 require fortran for MPI providers to avoid delayed compiler errors (#1937) 
* openmpi: require fortran for now

* mpich: requre fortran for now

* mvapich2: require fortran for now

* openmpi: flake8 fixes
 2016-10-26 09:12:26 -07:00
Erik Schnetter
bbdc429db3 Update OpenMPI to 2.0.1 (#1721) 2016-09-20 02:13:40 -07:00
Kelly Thompson
f0192edf0d For OpenMPI v 2+, add a configure option to provide C++ bindings. (#1730) 
+ Starting with version 2.0, OpenMPI no longer provides C++ bindings by default
  (libmpi_cxx.so). Add a configure option to instruct the build to also build
  and install libmpi_cxx.so.
+ This MPI feature is needed by at least one spack package (moab).
 2016-09-06 06:55:37 -07:00
Massimiliano Culpo
497bbb3ae3 added package : pexsi (#1550) 
* pexsi : added package
* cp2k : added pexsi (works for gcc+openmpi with and without plumed)
 2016-09-03 08:13:47 -07:00
Erik Schnetter
d78d18c4bd Update OpenMPI description (#1705) 2016-09-02 10:57:35 -07:00
Todd Gamblin
84e331c586 Remove unneeded noqa comments. 2016-08-10 16:33:39 -07:00
Erik Schnetter
5a1ed51dcd Correct indentation 2016-07-15 18:10:33 -04:00
Erik Schnetter
4663288b49 Update to OpenMPI 2.0.0 2016-07-15 13:00:48 -04:00
Adam J. Stewart
8921bf4552 Add MPI environment variables to packages 2016-06-23 10:08:40 -05:00
alalazo
b86e3047f3 openmpi : revert part of #1079 (OpenMPI can be built without fortran) 
Building OpenMPI without fortran is possible, and was already handled.
 Raising an install error we effectively renounce at clang+OpenMPI.

 build_environment : sets 'CC', 'CXX', and similar variables only if a compiler is found
 2016-06-20 20:46:11 +02:00
Todd Gamblin
cec283f608 Merge pull request #1059 from epfl-scitas/packages/mpi_wrappers_with_rpath 
MPI : have wrappers set RPATH instead of RUNPATH
 2016-06-20 10:47:24 -07:00
Todd Gamblin
c2d0870924 Merge pull request #1063 from eschnett/eschnett/openmpi-1.10.3 
Update OpenMPI to 1.10.3
 2016-06-20 10:45:56 -07:00
Denis Davydov
cf4a34c657 openmpi: raise an error without Fortran compiler 2016-06-19 11:59:29 +02:00
Erik Schnetter
a7ab064a9e Update OpenMPI to 1.10.3 2016-06-15 18:05:23 -04:00
alalazo
b09bee8158 qa : fixed flake8 issues 2016-06-15 13:29:30 +02:00
alalazo
b59d4f243b openmpi, mvapich2, mpich : filtered out "--Wl,--enable-new-dtag" in wrappers, as it turns RPATH into RUNPATH 
Apart from that turned `os.path.join` into `join_path` and `os.environ` into `env` in the packages
 2016-06-15 13:21:39 +02:00
Erik Schnetter
953b65abcc Do not pass "/usr" or "/usr/local" as path to configure 2016-06-11 16:41:39 -04:00
Erik Schnetter
09eed08b9c Auto-detect verbs location 2016-05-20 16:24:48 -04:00
Veronica G. Vergara Larrea
6c95a5d496 the right flag here is +, the default behavior is controlled in the variant 2016-05-17 14:37:36 -04:00
Veronica G. Vergara Larrea
471950434e add a flag to openmpi to allow users to disable vt support 2016-05-17 13:40:01 -04:00
Todd Gamblin
e7ced54369 Correct LLNL LGPL license template for clarity. 2016-05-11 21:22:25 -07:00
alalazo
474048ae8b openmpi : fixes #920, added sqlite as a dependency 
The default for the variant `pmi` has been set to `False`
 `sqlite` is now a dependency if `+sqlite3`
 2016-05-10 09:02:16 +02:00
alalazo
3d7684277a Merge branch 'openmpi_variants' of github.com:epfl-scitas/spack into openmpi_variants 
Conflicts:
	var/spack/repos/builtin/packages/openmpi/package.py
 2016-05-09 10:56:26 +02:00
alalazo
497ed9f933 Merge branch 'develop' of https://github.com/LLNL/spack into openmpi_variants 
Conflicts:
	var/spack/repos/builtin/packages/openmpi/package.py
 2016-05-09 08:23:30 +02:00
Massimiliano Culpo
7d5bb088b4 Merge branch 'develop' of https://github.com/LLNL/spack into openmpi_variants 
Conflicts:
	var/spack/repos/builtin/packages/openmpi/package.py
 2016-05-07 15:08:27 +02:00
Tom Scogland
86449790fe add pmi support and process managers to the MPIs 2016-05-06 15:15:40 -07:00
Todd Gamblin
10b0cb108c Merge pull request #893 from davydden/mpi_dependent_env 
Introduce variables for MPI compiler wrappers and document their usage
 2016-05-05 01:40:11 -07:00
Denis Davydov
b12fb7ebc8 mpi: move mpicc/mpicxx/mpifc/mpif77 to setup_dependent_package() 2016-05-05 10:24:32 +02:00
Denis Davydov
c3317819cb mpi: add self.spec.[mpicc|mpicxx|mpifc|mpif77] to avoid hardcoding MPI wrappers names 2016-05-04 10:37:52 +02:00
Adam J. Stewart
51c6867f72 Re-add hwloc as a dependency of openmpi 2016-05-03 10:30:35 -05:00
Massimiliano Culpo
cfc25d0a92 Merge branch 'develop' into openmpi_variants 2016-05-02 18:26:05 +02:00
Adam J. Stewart
c110865bf2 Remove OpenMPI dependency on hwloc 2016-05-02 11:06:33 -05:00
Massimiliano Culpo
6cffac79bd openmpi : added a few variants 2016-04-09 11:21:29 +02:00
Todd Gamblin
b1516f64eb Rename some environment methods to be less repetitive, add set_path. 2016-03-21 16:01:40 -07:00
Todd Gamblin
439d47b4e4 Refactor environment setup. 
- Gave setup_environment and setup_dependent_environment more similar
  signatures. They now allows editing the Spack env and the runtime
  env for *this* package and dependents, respectively.

- modify_module renamed to setup_dependent_python_module for symmetry
  with setup_dependent_environment and to avoid confusion with
  environment modules.

- removed need for patching Package objects at runtime.

- adjust packages to reflect these changes.
 2016-03-21 16:01:35 -07:00
alalazo
f0f0663d1b package : split environment_modifications into setup_environment and setup_dependent_environment. 
package : renamed `module_modifications` to `modify_module` for consistency
 2016-03-17 15:11:39 +01:00
alalazo
572cb93bf8 package : renamed setup_dependent_environment to module_modifications 2016-03-15 14:05:30 +01:00
alalazo
c85888eb57 package : added environment_modifications 2016-03-15 13:36:41 +01:00
Erik Schnetter
2f70c842b8 Disable patch that was merged into upstream in 1.10.2 2016-01-21 14:13:39 -05:00
Erik Schnetter
6b3f023d98 Update OpenMPI to 1.10.2 2016-01-21 14:05:16 -05:00
alalazo
19caac69d8 openmpi : turned torque support into a variant (default false) 
hdf5 : fixed a few bugs, removed suspicious macro deinition, etc.
 2016-01-20 15:22:49 +01:00
Todd Gamblin
8d6342c53d Merge branch 'mplegendre-multi_pkgsrc_roots' into develop 
- This moves var/spack/packages to var/spack/repos/builtin/packages.

- Packages that did not exist in the source branch, or were changed in
  develop, were moved into var/spack/repos/builtin/packages as part of
  the integration.

Conflicts:
	lib/spack/spack/test/unit_install.py
	var/spack/repos/builtin/packages/clang/package.py
 2016-01-19 01:16:08 -08:00
Todd Gamblin
c65fd3a289 Merge branch 'develop' into mplegendre-multi_pkgsrc_roots 
Conflicts:
	lib/spack/spack/cmd/create.py
	lib/spack/spack/cmd/extensions.py
	lib/spack/spack/cmd/fetch.py
	lib/spack/spack/cmd/uninstall.py
	lib/spack/spack/config.py
	lib/spack/spack/database.py
	lib/spack/spack/directory_layout.py
	lib/spack/spack/packages.py
	lib/spack/spack/spec.py
 2015-12-25 16:35:55 -08:00
Todd Gamblin
89d5127900 New, cleaner package repository structure. 
Package repositories now look like this:

    top-level-dir/
        repo.yaml
        packages/
            libelf/
                package.py
            mpich/
                package.py
            ...

This leaves room at the top level for additional metadata, source,
per-repo configs, indexes, etc., and it makes it easy to see that
something is a spack repo (just look for repo.yaml and packages).
 2015-11-26 14:19:27 -08:00