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Author SHA1 Message Date
Laurent Aphecetche
ca0e023c43 geant4-vmc: unset MACOSX_DEPLOYMENT_TARGET (#32828) 2022-10-06 10:41:08 -04:00
Sergey Kosukhin
70a3868168 ncl: enable building with recent versions of hdf5 (#32842) 2022-10-06 16:20:55 +02:00
iarspider
f168a44fcb Add checksum for py-urllib3 1.26.12 (#33019) 
* Add checksum for py-urllib3 1.26.12

* Update var/spack/repos/builtin/packages/py-urllib3/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Fixes from review

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2022-10-06 07:38:00 -06:00
Harmen Stoppels
c959d6c905 gmake: add 4.3.90 alpha release (#33044) 
GNU Make 4.3.90 supports jobserver through fifo, so it's nice to add the
alpha release to Spack already.
 2022-10-06 04:34:00 -06:00
Manuela Kuhn
4cfe58651a py-docutils: add 0.19 (#32814) 2022-10-06 04:29:48 -06:00
eugeneswalker
a56cd8ffb6 e4s ci: add charliecloud (#32990) 2022-10-06 12:22:23 +02:00
Sreenivasa Murthy Kolam
5cf05b6515 mlirmiopen: update the SHA for 5.2.1 release (#33049) 2022-10-06 03:54:03 -06:00
Harmen Stoppels
fc5da74998 docs: fix deprecated use of install_tree (#33004) 2022-10-06 09:45:46 +00:00
iarspider
0bc23d8bdc Add checksum for py-markupsafe 2.1.1 (#33003) 2022-10-06 03:42:01 -06:00
iarspider
5fc0bef4fc Add checksum for py-avro 1.11.1 (#32979) 2022-10-06 03:26:07 -06:00
iarspider
0184f008f1 Add checksum for py-autopep8 1.7.0, py-pycodestyle 2.9.1 (#32978) 2022-10-06 03:22:06 -06:00
Mark W. Krentel
e8dcfcd7ae hpcviewer: add v2022.10 (#33041) 2022-10-06 03:18:04 -06:00
dependabot[bot]
bfd848089f build(deps): bump actions/checkout from 3.0.2 to 3.1.0 (#32998) 2022-10-06 02:58:13 -06:00
Wouter Deconinck
887dd3fcd9 dd4hep: add v1.23 (#32968) 
Release notes at https://github.com/AIDASoft/DD4hep/releases/tag/v01-23
 2022-10-06 10:57:09 +02:00
iarspider
96daaa359d Add checksum for py-soupsieve 2.3.2.post1 (#32980) 
* Add checksum for py-soupsieve 2.3.2.post1

* Update package.py

* Update var/spack/repos/builtin/packages/py-soupsieve/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2022-10-06 02:53:58 -06:00
Jen Herting
1f5729644b New package: py-scanpy (#32565) 
* [py-scanpy] New package

* [py-scanpy] Added types

* [py-scan] reworked dependencies

* [py-scanpy] flake8

* [py-scanpy] update import

* [py-scanpy] fixed minor issues

Co-authored-by: James A Zilberman <jazrc@rit.edu>
 2022-10-06 10:27:37 +02:00
iarspider
aab5bcf05a Add checksum for py-histoprint 2.4.0 (#33017) 2022-10-06 02:22:00 -06:00
iarspider
0ae46519ba Add checksum for py-hepdata-lib 0.10.1, py-hepdata-validator 0.3.3 (#33018) 
* Add checksum for py-hepdata-lib 0.10.1, py-hepdata-validator 0.3.3

* Update package.py

* Update package.py

* Update package.py

* Update package.py
 2022-10-06 02:14:06 -06:00
Vanessasaurus
270a19504b flux-core: add v0.44.0 (#33039) 
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
 2022-10-06 02:10:11 -06:00
snehring
6de5f58026 dock: fix compilation with gcc10+, add dep (#33034) 2022-10-06 09:57:14 +02:00
Jean Luca Bez
33b1425add h5bench: update version (#33000) 
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
 2022-10-06 09:48:09 +02:00
Jen Herting
071c323b95 New package: py-pprintpp (#30764) 
* New package: py-pprintpp

* [py-pprintpp] added dependency on setuptools

Co-authored-by: Viv Eric Hafener <vehrc@sporcbuild.rc.rit.edu>
 2022-10-06 09:46:32 +02:00
Andrew W Elble
28de7da0cc cuda: add v11.8.0 (#33027) 
Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
 2022-10-06 09:46:01 +02:00
Vanessasaurus
791776cece flux-sched: add v0.25.0 (#33038) 
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
 2022-10-06 09:41:15 +02:00
Chris White
9ba102c2bb add blt 0.5.2 (#33029) 2022-10-06 00:02:04 -06:00
Jen Herting
c5d62294b2 New package: py-pyassimp (#30762) 
* New package: py-pyasimp

* Cleaned up dependencies

* Fixed liked issue

* Fixed linked issue

* [py-pyassimp] depends on assimp

* [py-pyassimp] added dependency on py-setuptools

* [@spackbot] updating style on behalf of qwertos

Co-authored-by: Viv Eric Hafener <vehrc@sporcbuild.rc.rit.edu>
Co-authored-by: qwertos <qwertos@users.noreply.github.com>
 2022-10-05 21:43:29 -05:00
Harmen Stoppels
189baa96db python: don't accidentally link to system db libs (#33007) 2022-10-05 18:22:01 -06:00
snehring
4b17d9b92e salmon: new version 1.9.0 (#33035) 2022-10-05 17:10:00 -06:00
Charles Ferenbaugh
21ca17a157 pfunit: fix @4: ~openmp (#33024) 2022-10-05 17:03:18 -06:00
iarspider
5b45ffb353 Add checksum for py-threadpoolctl 3.1.0 (#33012) 
* Add checksum for py-threadpoolctl 3.1.0

* Update package.py
 2022-10-05 16:54:04 -06:00
iarspider
143faeee0e Add checksum for py-distlib 0.3.6 (#33009) 
* Add checksum for py-distlib 0.3.6

* Update package.py

* Update package.py

* Update package.py
 2022-10-05 16:32:56 -06:00
dlkuehn
b4df99376d Package jsonnet: change sha256sum to sha256 for version hash (#33031) 
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
 2022-10-05 14:40:59 -07:00
Daryl W. Grunau
b2c2958acc eospac: support version 6.5.5 (#33023) 
Co-authored-by: Daryl W. Grunau <dwg@lanl.gov>
 2022-10-05 14:08:27 -07:00
snehring
881571c4ba canu: new version 2.2 (#32999) 2022-10-05 15:06:08 -06:00
Glenn Johnson
aef6d4a40a add version 4.2.1 of R (#32993) 2022-10-05 13:40:45 -07:00
Adam J. Stewart
760294b402 py-matplotlib: add v3.6.0, new backends (#32697) 
* py-matplotlib: add v3.6.0, new backends
* [@spackbot] updating style on behalf of adamjstewart
* Undo conditional variant hack
* Update dependencies

Co-authored-by: adamjstewart <adamjstewart@users.noreply.github.com>
 2022-10-05 13:36:37 -07:00
Charles Ferenbaugh
417760e829 Fix wonton CMake config to not break host codes (#33026) 2022-10-05 14:06:12 -06:00
MichaelLaufer
e0b418f288 py-pyfr: add v1.15.0, explicitly set env variables for dependencies (#32964) 
* Update to PyFR v1.15.0

* allow unsupported compilers for cuda

* update requirement for py-gimmik version

* update requirement for cuda version

* update versions, style fix

* lib directory changed, style fixes

* PYFR_METIS_LIBRARY_PATH set
 2022-10-05 14:08:37 -05:00
eugeneswalker
1fe8387d23 e4s ci: add gotcha cpu (#32989) 2022-10-05 11:43:13 -07:00
Adam J. Stewart
d956da95c3 py-torch-nvidia-apex: ~cuda does not build (#32939) 2022-10-05 12:38:21 -05:00
Axel Huebl
4ed963dda1 OpenBLAS 0.3.21: w/o Fortran (#32398) 
There is a new OpenBLAS release out that can be compiled w/o
a Fortran compiler.

macOS XCode developers, rejoice. Maybe at some point Spack
becomes a package manager that can be used without using
another package manager (to get gfortran) 🎉

phist: add conflict on reference netlib-lapack due to API change in lapack.h

Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
 2022-10-05 11:30:09 -06:00
eugeneswalker
cefc1dc808 e4s ci: add caliper +cuda (#32992) 2022-10-05 10:25:18 -07:00
eugeneswalker
af02dcbd2e e4s ci: enable caliper cpu (#32988) 2022-10-05 10:25:04 -07:00
iarspider
1800684ac1 Add checksum for py-flit 3.7.1 (#33013) 2022-10-05 11:41:16 -05:00
eugeneswalker
82cfa68e69 e4s: add omega-h +cuda (#32156) 2022-10-05 09:36:09 -07:00
eugeneswalker
27074d5bec e4s ci: add unifyfs (#32991) 2022-10-05 09:28:19 -07:00
Wileam Y. Phan
9fe315b953 Make hwloc both CudaPackage and ROCmPackage (#31334) 
* Make hwloc both CudaPackage and ROCmPackage

* Remove redundant variants
 2022-10-05 09:45:47 -06:00
iarspider
592d97137a Add checksum for py-arrow 1.2.3 (#33005) 2022-10-05 10:38:58 -05:00
iarspider
9abee2e851 Add checksum for py-pydantic 1.10.2 (#33006) 2022-10-05 10:37:50 -05:00
iarspider
e5da747d6f Add checksum for py-rich 12.5.1 (#33008) 2022-10-05 10:29:30 -05:00