Commit Graph

38377 Commits

Author SHA1 Message Date
Alex Hedges
34b2f28a5e
Fix malformed RST link in documentation (#47309) 2024-10-30 09:40:35 +01:00
Alex Hedges
8a10eff757
Fix errors found by running spack audit externals (#47308)
The problem was that `+` is part of the regex grammar, so it needs to be
escaped.
2024-10-30 09:38:36 +01:00
Alex Hedges
44d09f2b2b
Fix typo in default concretizer.yaml (#47307)
This was caught by `codespell` when I copied the config file into an
internal repository.
2024-10-30 09:35:30 +01:00
Harmen Stoppels
161b2d7cb0
std_pip_args: use PythonPipBuilder.std_args(...) instead (#47260) 2024-10-30 09:18:56 +01:00
Wouter Deconinck
4de5b664cd
r-*: add new versions (#46093)
* r-*: updates to latest versions
* r-*: add new dependencies
* r-proj: fix docstring line length
* r-list: add homepage
* r-*: add more dependencies
* r-rmpi: use virtual dependencies, conflict openmpi@5:
* r-cairo: require cairo +png; +pdf for some versions; cairo +fc when +ft
* r-proj: set LD_LIBRARY_PATH since rpath not respected
2024-10-29 18:27:43 -06:00
Wouter Deconinck
5d0c6c3350
rocketmq: add v5.3.1 (#46976)
and it installs.
2024-10-29 22:48:42 +00:00
Jon Rood
8391c8eb87
nalu-wind: version 2.1.0 requires trilinos 15.1.1 (#47296) 2024-10-29 15:17:10 -06:00
Georgia Stuart
3108849121
Add new seqfu version (#47294)
Signed-off-by: Georgia Stuart <gstuart@umass.edu>
2024-10-29 15:16:45 -06:00
Andrey Perestoronin
52471bab02
Added packages to for intel-2025.0.0 release (#47264)
* Added packages to for intel-2025.0.0 release

* fix style

* pin mkl to 2024.2.2

until e4s can upgrade to 2025 compiler and ginkgo compatibility issue can be resolved.

---------

Co-authored-by: Robert Cohn <rscohn2@gmail.com>
2024-10-29 12:50:30 -06:00
Massimiliano Culpo
b8e3246e89
llnl.util.lang: add classes to help with deprecations (#47279)
* Add a descriptor to have a class level constant

This descriptor helps intercept places where we set a value on instances.
It does not really behave like "const" in C-like languages, but is the
simplest implementation that might still be useful.

* Add a descriptor to deprecate properties/attributes of an object

This descriptor is used as a base class. Derived classes may implement a
factory to return an adaptor to the attribute being deprecated. The
descriptor can either warn, or raise an error, when usage of the deprecated
attribute is intercepted.

---------

Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2024-10-29 19:06:26 +01:00
Paul R. C. Kent
60cb628283
py-pycifrw: add v4.4.6 (#47262) 2024-10-29 10:34:03 -07:00
James Taliaferro
5bca7187a5
py-uv: new version (#47275)
This adds the current latest version of py-uv. While working on this, I also
found that uv (including older versions) has a build dependency on cmake which
was not specified in the package, so I added it as a dependency.

I also found that on my machine, the build process had trouble finding cmake,
so I set the path to it explicitly as an environment variable.
2024-10-29 10:30:13 -07:00
Stephen Nicholas Swatman
65daf17b54
acts dependencies: new versions as of 2024/10/28 (#47265)
This commit adds a new version of ACTS and detray.
2024-10-29 10:28:18 -07:00
Valentin Volkl
d776dead56
gaudi: gdb doesn't build on macos/arm64 (#47266)
* gaudi: gdb doesn't build on macos/arm64
* fix imports
2024-10-29 10:26:35 -07:00
Satish Balay
741a4a5d4f
petsc, py-petsc4py: add v3.22.1 (#47267) 2024-10-29 10:25:21 -07:00
Paul R. C. Kent
dbe7b6bc6b
quantum-espresso: add v7.4.0 (#47268) 2024-10-29 10:23:20 -07:00
Bernhard Kaindl
ffc904aa6b
r-textshaping,r-ragg: Add dep on pkgconfig, type="build" and handle freetype@2.13.3 (#47091)
* r-textshaping: build-dep on pkgconfig to find harfbuzz
* r-ragg: Fix build with freetype@2.13.3
2024-10-29 10:22:10 -07:00
Christoph Junghans
f889b2a95e
gromacs: add missing sycl contraint (#47274) 2024-10-29 10:19:36 -07:00
Lin Guo
7f609ba934
wrf: add v4.6.0 and v4.6.1 versions (#47203) 2024-10-29 10:18:06 -07:00
Massimiliano Culpo
ffd7830bfa
cbflib: improve syntax for querying %gcc version (#47280)
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-10-29 15:33:41 +01:00
Jose E. Roman
20a6b22f78
New patch release SLEPc 3.22.1 (#47257) 2024-10-29 09:06:32 -05:00
teddy
1bff2f7034
py-mpi4py: add v4.0.1 (#47261)
Co-authored-by: t. chantrait <teddy.chantrait@cea.fr>
2024-10-29 09:06:01 -05:00
Adam J. Stewart
ca48233ef7
py-jupyter-core: set environment variables for extensions (#47192)
* py-jupyter-core: set environment variables for extensions

* Changes committed by gh-spack-pr

---------

Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2024-10-29 14:45:26 +01:00
Martin Lang
c302049b5d
spglib: new version 2.5.0 (#47291) 2024-10-29 07:03:12 -06:00
Cédric Chevalier
360dbe41f7
kokkos: async malloc (#46464) 2024-10-29 13:28:12 +01:00
Harmen Stoppels
ea1aa0714b
bootstrap: do not consider source when metadata file missing (#47278) 2024-10-29 10:57:31 +01:00
Harmen Stoppels
7af1a3d240
std_meson_args: deprecate (#47259) 2024-10-29 07:54:28 +01:00
Harmen Stoppels
962115b386
builder.py: builder_cls should be associated to spack.pkg module (#47269) 2024-10-29 07:53:06 +01:00
Harmen Stoppels
f81ca0cd89
directives_meta.py: use startswith to test module part of spack.pkg (#47270) 2024-10-29 07:51:36 +01:00
Jon Rood
25a5585f7d
exawind: remove generated fortran dependencies (#47276) 2024-10-28 21:26:11 -06:00
Greg Becker
e81ce18cad
cmd/solve: use interface from cmd/spec (#47182)
Currently, `spack solve` has different spec selection semantics than `spack spec`.
`spack solve` currently does not allow specifying a single spec when an environment is active.

This PR modifies `spack solve` to inherit the interface from `spack spec`, and to use
the same spec selection logic. This will allow for better use of `spack solve --show opt`
for debugging.

---------

Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
2024-10-28 19:28:03 -07:00
Christoph Junghans
d48d993ae7
lammps: add heffte support (#47254)
* lammps: add heffte support
* Add Richard's suggestion
2024-10-28 15:05:17 -07:00
Paul R. C. Kent
fbd5c3d589
py-pyscf: add v2.7.0 (#47272) 2024-10-28 16:05:44 -05:00
Christophe Prud'homme
11aa02b37a
feelpp/spack#11 (#47243) 2024-10-28 13:25:29 +01:00
Harmen Stoppels
b9ebf8cc9c
gdk-pixbuf/atk: delete old versions, make mesonpackage (#47258)
* gdk-pixbuf: delete old versions, make mesonpackage

goal is to get rid of `std_meson_args` global, but clean up package
while at it.

`setup_dependent_run_environment` was removed because it did not depend
on the dependent spec, and would result in repeated env variable
changes.

* atk: idem

* fix a dependent
2024-10-28 12:21:59 +01:00
Miroslav Stoyanov
1229d5a3cc
tasmanian: add v8.1 (#47221)
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-10-28 05:19:50 -06:00
teddy
be5a096665
py-non-regression-test-tools: add v1.1.2 & remove v1.0.2 (tag removed) (#47256)
Co-authored-by: t. chantrait <teddy.chantrait@cea.fr>
2024-10-28 05:06:23 -06:00
Adam J. Stewart
32ce278a51
ML CI: Linux aarch64 (#39666)
* ML CI: Linux aarch64

* Add config files

* No aarch64 tag

* Don't specify image

* Use amazonlinux image

Co-authored-by: kwryankrattiger <80296582+kwryankrattiger@users.noreply.github.com>

* Update and require

* GCC is too old

* Fix some builds

* xgboost doesn't support old GCC + cuda

* Run on newer Ubuntu

* Remove mxnet

* Try aarch64 range

* Use main branch

* Conflict applies to all targets

* cuda only required when +cuda

* Use tagged version

* Comment out tf-estimator

* Add ROCm, use newer Ubuntu

* Remove ROCm

---------

Co-authored-by: kwryankrattiger <80296582+kwryankrattiger@users.noreply.github.com>
2024-10-28 10:30:07 +01:00
Adam J. Stewart
e83536de38
bazel: add Apple Clang 16 conflict (#47228) 2024-10-28 09:11:59 +01:00
jmlapre
ff058377c5
sst: update core, elements, macro to 14.1.0 (#47184) 2024-10-28 09:10:46 +01:00
Adam J. Stewart
e855bb011d
py-hatchet: add v1.4.0 (#47222) 2024-10-28 09:05:16 +01:00
Bernhard Kaindl
dbab4828ed
py-mgmetis: fails to build with mpi4py @4: depend on @3 (#47236) 2024-10-28 09:04:18 +01:00
Christophe Prud'homme
fac92dceca
cpr: add versions up to v1.11 (#47242) 2024-10-28 08:39:16 +01:00
Wouter Deconinck
035b890b17
pango: add v1.54.0 (#47244) 2024-10-28 08:37:21 +01:00
Wouter Deconinck
2a7e5cafa1
geode: add v1.13.8, v1.14.3, v1.15.1 (#47253) 2024-10-28 08:36:26 +01:00
Wouter Deconinck
49845760b6
less: add v661, v668 (#47252) 2024-10-27 19:47:35 -06:00
Wouter Deconinck
ce6255c0bb
nano: add v8.1, v8.2 (and v6.4) (#47245)
* nano: add v8.1, v8.2

* nano: depends on gettext

* nano: add v6.4
2024-10-28 01:21:18 +01:00
Diego Alvarez S.
f0d54ba39d
Add nextflow 24.10.0 (#47251) 2024-10-27 17:32:20 -06:00
Harmen Stoppels
2ec4281c4f
Remove a few redundant imports (#47250)
* remove self-imports

* remove unused imports
2024-10-27 15:40:05 -06:00
Harmen Stoppels
e80d75cbe3
gha: circular imports: pin (#47248) 2024-10-27 21:34:32 +01:00