Glenn Johnson
43ece950e5
htslib: add version 1.12 ( #22882 )
2021-04-13 10:56:48 -07:00
Harmen Stoppels
17ea01fbce
bump cmake ( #22961 )
2021-04-13 09:46:19 -07:00
Adam J. Stewart
af52b8e29e
py-pandas: add v1.2.4 ( #22944 )
2021-04-13 16:39:47 +00:00
Sreenivasa Murthy Kolam
6c632dad71
changes to enable rocm builds using git repo ( #22943 )
2021-04-13 15:36:34 +00:00
Harmen Stoppels
e7d392c49a
Fix issue where binutils builds ld with ~ld ( #22959 )
...
Let's be very explicit and always add --enable or --disable.
2021-04-13 16:31:44 +02:00
Matthieu Dorier
e320b1d7e4
berkeley-db: making +cxx and +stl default to True ( #22960 )
2021-04-13 13:18:28 +00:00
Simon Frasch
c11af21da2
spfft: add version 1.0.2 ( #22958 )
2021-04-13 13:35:37 +02:00
Harmen Stoppels
0b9bd92511
SIRIUS and SpFFT versions need ROCm < 4.1 ( #22957 )
...
FindHIP.cmake script is not working for both 4.0 and 4.1.
It's fixed in their develop branches
2021-04-13 11:58:19 +02:00
Tiziano Müller
1f1b568e95
spglib: fix libs property for some multilib distros ( #22956 )
...
on multilib distros with lib/lib64 (rather than lib32/lib) the library ends up in a dir lib64/ instead of lib/, breaking the libs property (and the cp2k+spglib build)
2021-04-13 11:01:15 +02:00
yellowhat
bff713aeb2
gcc: add v10.3 ( #22894 )
2021-04-13 08:14:43 +00:00
Jen Herting
85e70600ed
New package: r-tictoc ( #22937 )
2021-04-12 21:53:36 +00:00
Robert Mijakovic
a7d7f4e98a
vtk: new version, 9.0.1 ( #22880 )
...
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
2021-04-12 15:52:07 -06:00
Jen Herting
62e256d995
New Package: r-assertive-types ( #22933 )
2021-04-12 21:48:13 +00:00
Harmen Stoppels
782a7dc690
Add new versions of patchelf ( #22939 )
2021-04-12 21:42:38 +00:00
Asher Mancinelli
e30aff9b6b
Bump hiop version ( #22884 )
2021-04-12 14:30:46 -07:00
Glenn Johnson
976cf4496b
samtools: add version 1.12 ( #22885 )
2021-04-12 14:28:04 -07:00
arjun-raj-kuppala
24f4a39d0e
ROCm relase 4.1.0: Bump up version of rocm-validation-suite ( #22946 )
2021-04-12 20:46:10 +00:00
Pramod Kumbhar
96c984e0ce
Add conflict for Mac OS for STAT package ( #22919 )
...
See https://github.com/LLNL/STAT/issues/19
2021-04-12 12:14:15 -07:00
jthies
087015e1ac
packages/phist: new version 1.9.4 ( #22922 )
...
fix version 1.7.4 checksum
re 22758: phist-1.9.4 should resolve this issue, once confirmed I will add a patch for older versions.
2021-04-12 11:18:01 -07:00
Axel Huebl
982d3abcfd
openPMD-api: 0.13.3 ( #22910 )
2021-04-12 18:10:52 +02:00
Glenn Johnson
0b472a91d1
maker: add v3.01.03 ( #22915 )
2021-04-12 11:15:03 +02:00
Chris White
edcd0703df
blt: add v0.4.0 ( #22917 )
2021-04-12 11:14:05 +02:00
Glenn Johnson
7c06b472f5
bart: update package ( #22926 )
...
- add version 0.7.00
- make build work with intel-oneapi-mkl
- Add myself as maintainer
2021-04-12 11:05:53 +02:00
Martin Pokorny
e3b0d7ce0e
casacore: change FFT variants for correct, version dependent, FFT choices ( #22925 )
...
Required dependency on FFTW for casacore@3.4.0:; optional for
casacore@:3.4.0, depending selection of FFTPack
2021-04-12 11:03:24 +02:00
Glenn Johnson
e27aa39427
mumax: constrain go version ( #22927 )
...
Mumax will not build with go-1.16.
2021-04-12 11:01:27 +02:00
Seth R. Johnson
b7f74f6ef6
qt: restrict python version when +webkit ( #22928 )
...
See #17270 .
```
make[2]: Entering directory `/tmp/vavolkl/spack-stage/spack-stage-qt-5.14.2-63dapppjbq6vqh3le7pazsprijls7cfl/spack-src/qtwebengine/src'
/bin/sh: -c: line 0: syntax error near unexpected token `('
/bin/sh: -c: line 0: `echo Modules will not be built. Python version 2 (2.7.5 or later) is required to build QtWebEngine.'
make[2]: *** [errorbuild] Error 1
```
2021-04-12 11:00:32 +02:00
thelfer
9e702a3d44
tfel: add missing variant ( #22558 )
...
The variant was used but not defined.
2021-04-12 06:58:10 +00:00
Martin Pokorny
06f291a3cd
libsakura: Change precision for fftw dependency depending on libsakura version ( #22924 )
...
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-04-12 08:38:18 +02:00
Sreenivasa Murthy Kolam
291a2b541b
fix 22802- fix incorrect arch list for rocblas ( #22881 )
2021-04-10 11:17:21 +02:00
Harmen Stoppels
391ab10337
Drop cxx berkeley-db ( #22899 )
2021-04-09 19:30:22 -07:00
Jen Herting
8d52200cbc
New package: r-ca ( #22913 )
...
Co-authored-by: Alex C Leute <aclrc@rit.edu>
2021-04-09 14:13:21 -06:00
Jen Herting
35ed2b26b5
New package: r-assertive-properties ( #22914 )
...
Co-authored-by: Alex C Leute <aclrc@rit.edu>
Co-authored-by: Alex Leute <acl2809@rit.edu>
2021-04-09 15:08:18 -05:00
Robert Mijakovic
9e6ef0e697
Flatbuffers: fixes for GCC 10+ ( #22829 )
2021-04-09 10:46:48 -07:00
Seth R. Johnson
ca5c2de517
swig: mark conflict and add maintainer ( #22911 )
...
Closes #22407
2021-04-09 17:38:49 +00:00
Olivier Cessenat
4d288a802e
New Package: STRIPACK ( #22544 )
2021-04-09 09:26:58 -07:00
Danny Taller
e21e26094e
CARE and dependencies fixed to work with +cuda ( #22874 )
2021-04-08 20:54:37 +00:00
Ryan Marcellino
1c5c53f505
new package: py-pytest-qt ( #22878 )
2021-04-08 15:07:28 -05:00
Maciej Wójcik
4adb76c4c5
Gromacs CUDA patch + some version constraints ( #22851 )
2021-04-08 09:52:41 -07:00
darmac
4807956977
py-mo-pack: add LDFLAGS to fix build error ( #22747 )
2021-04-08 11:06:57 -05:00
darmac
8a0aec4c4d
py-pyfftw: add LDFLAGS to fix build error ( #22745 )
2021-04-08 11:06:23 -05:00
Jen Herting
44d2444854
openal-soft: new package ( #22265 )
2021-04-08 16:55:45 +02:00
lpoirel
0ecce5797e
petsc: forward +metis to mumps ( #21291 )
...
Co-authored-by: lpoirel <lpoirel@users.noreply.github.com>
2021-04-08 16:50:58 +02:00
darmac
e0f810956c
libmcrypt: new package ( #22144 )
2021-04-08 16:48:47 +02:00
Robert Pavel
f27fefc3c1
Exodusii: added versions up to v2021-04-05 ( #22819 )
...
Fixed previously unspecified python dependency and ensured that spack's
python is what exodus@v2016 uses. Also, in the process, identified many
missing versions
2021-04-08 16:36:41 +02:00
Robert Mijakovic
7170c666a0
hpctoolkit: fix for GCC 10 ( #22864 )
...
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
2021-04-08 08:31:17 -06:00
Tomoyasu Nojiri
a0f9ffd80c
manta: make it build on aarch64 ( #22630 )
2021-04-08 16:16:30 +02:00
Cyrus Harrison
68cec598dc
glfw: make it build on MacOS ( #22626 )
2021-04-08 14:14:14 +02:00
Harmen Stoppels
65563946e3
squashfs: ensure we install with required options ( #22863 )
...
Currently the make install step uses the default variables, which causes
things to rebuild with default options.
2021-04-08 14:11:40 +02:00
lorddavidiii
5b77046e20
ncurses: add determine_variants for abi version ( #22647 )
2021-04-08 14:10:36 +02:00
iarspider
da88c0e6ff
Add slightly older version of Oracle Instant Client ( #22862 )
2021-04-08 13:59:42 +02:00
darmac
70e132dd9a
collectd: add v5.12.0 ( #22746 )
...
Changed url to use release tarball instead of repo snapshot
as this permits to drop build deps
2021-04-08 13:47:55 +02:00
Adam J. Stewart
cca5f260e5
py-python-certifi-win32: add new package ( #22843 )
2021-04-08 13:33:04 +02:00
Filippo Spiga
5500eed60c
NVHPC: add v21.3 ( #22860 )
2021-04-08 09:06:53 +00:00
Scott McMillan
30153b1064
tar: make it build with nvhpc ( #22853 )
...
Co-authored-by: Scott McMillan <smcmillan@nvidia.com>
2021-04-08 10:57:05 +02:00
Scott McMillan
2a7f588612
kim-api: support the NVIDIA compiler ( #22857 )
...
Co-authored-by: Scott McMillan <smcmillan@nvidia.com>
2021-04-08 10:55:32 +02:00
Adam J. Stewart
e38aac8cb6
py-wincertstore: add new package ( #22844 )
2021-04-08 02:55:10 -06:00
Glenn Johnson
8246e4dde0
Patch to fix mariadb and mariadb-c-client packages for cmake-3.20 ( #22854 )
2021-04-08 10:50:17 +02:00
Vicente Bolea
f1f5f9bf5b
vtkm: add v1.6.0-rc1, make v1.5.1 preferred ( #22855 )
...
Signed-off-by: Vicente Adolfo Bolea Sanchez <vicente.bolea@kitware.com>
2021-04-08 10:45:05 +02:00
Dr. Christian Tacke
7e17fb1ae1
root: add conflict with intel-oneapi-tbb ( #22850 )
...
As originally noted, ROOT 6.22 does not work with intel's
TBB >= 2021.1. So we need to also conflict with the newer
package (intel-oneapi-tbb)
2021-04-08 10:38:46 +02:00
Sreenivasa Murthy Kolam
43bdbc8234
bumpup version for rocm-debug-agent,rocprofiler,rocsolver for rocm-4.… ( #22722 )
2021-04-07 21:16:56 +00:00
Kelly (KT) Thompson
33bcc0ac89
[package][new version] Provide draco-7.10.0. ( #22846 )
2021-04-07 21:03:46 +00:00
Sreenivasa Murthy Kolam
56418bac39
bump up version for rccl for rocm-4.1.0 release ( #22762 )
2021-04-07 22:55:20 +02:00
Adam J. Stewart
77a211dc46
py-requests-ntlm: add new package ( #22842 )
2021-04-07 13:53:58 -07:00
Dan Bonachea
f89b5e1e84
Add new UPC++ release version ( #22849 )
2021-04-07 20:36:45 +00:00
Martin Pokorny
355b7787d4
Remove ~mpi variant from fftw dependency ( #22848 )
2021-04-07 13:27:42 -07:00
Adam J. Stewart
e349ae26fc
py-ntlm-auth: add new package ( #22841 )
2021-04-07 12:25:22 -07:00
Asher Mancinelli
f365cb4535
Add ExaGO develop branch ( #22847 )
2021-04-07 18:48:35 +00:00
Robert Mijakovic
9c86e919cd
FFTW: update pfftw patch for FFTW 3.3.9 ( #22801 )
2021-04-07 11:23:07 -07:00
Glenn Johnson
e9c4123f97
Merge py-uproot4 into py-uproot ( #22831 )
2021-04-07 13:20:36 -05:00
Adam J. Stewart
995b6556c9
py-lerc: add new package ( #22839 )
2021-04-07 11:15:26 -07:00
Adam J. Stewart
868bc1db0a
py-keyring: add new package ( #22838 )
2021-04-07 11:07:05 -07:00
Adam J. Stewart
86055cdbdd
py-ujson: add new version ( #22835 )
2021-04-07 11:03:39 -07:00
Adam J. Stewart
ae43ecc7ba
ImageMagick: specify how to find libraries ( #22833 )
2021-04-07 10:50:37 -07:00
Adam J. Stewart
e14e6fbbd2
py-importlib-metadata: add new version ( #22836 )
2021-04-07 10:46:01 -07:00
Erik Schnetter
db0f181ec1
New package: mmv ( #22815 )
2021-04-07 10:44:00 -07:00
Robert Mijakovic
64d8e4f5ad
R: new version, 4.0.5 ( #22840 )
...
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
2021-04-07 10:41:13 -07:00
Erik Schnetter
c843a5b585
ssht: New versions 1.3.6, 1.3.7 ( #22832 )
2021-04-07 11:40:10 -06:00
Glenn Johnson
ef188a1e12
new package: gatetools ( #22659 )
...
* new package: gatetools
This PR adds the gatetools package and dependencies. The gatetools
package is a set of command line tools for gate. Since it is primarily a
CLI, although python modules can be loaded, it is named gatetools as
opposed to py-gatetools.
* Fix quote characterss to avoid test error
* Found another UTF8 character that was tripping up tests
* Another UTF-8 character to replace
* Remove py-python-box dependency and package file
* Make numpy a variant
- py-setuptools needs to be a run dependendency
This was masked by py-numpy having py-setuptools as a run dependency.
* Add missing build depency on py-pytest-runner
2021-04-07 17:39:53 +00:00
Glenn Johnson
7c87ebeb91
Some improvements to gate package ( #22656 )
...
- set constraint for geant4 to version 10.6 as gate does not work with
geant-10.7+
- set GATE_USE_ITK: Although RTK is built under ITK, there are some ITK
macros that need to be set explicitly.
2021-04-07 12:13:05 -05:00
Sergey Kosukhin
253c0d0ebb
hdf5: avoid compilation with -I/usr/include ( #22808 )
2021-04-07 09:49:16 -07:00
Vasily Danilin
ccc90e3a79
Integrate oneAPI 2021.2.0 release ( #22821 )
2021-04-07 09:44:12 -07:00
Robert Cohn
c8b4414230
[oneapi] fix mkl deps, externally installed, and docs ( #22607 )
2021-04-07 10:31:08 -06:00
Evili del Rio
6c16f5c5d5
Py py spy add libunwind 1 ( #22827 )
...
* Add missing libunwarp dependency
py-py-spy fails to build with:
= note: /bin/ld: cannot find -lunwind
/bin/ld: cannot find -lunwind-ptrace
/bin/ld: cannot find -lunwind-x86_64
collect2: error: ld returned 1 exit status
* Correct libunwind instead of libunwarp
* Change libunwind dependency to unwind
2021-04-07 16:10:08 +00:00
Evili del Rio
cfbb4abb79
Update package.py ( #22826 )
2021-04-07 10:44:02 -05:00
Mosè Giordano
ad3eb98c4b
libblastrampoline: Add version 3.0.4 ( #22830 )
2021-04-07 15:33:27 +00:00
Cameron Rutherford
c4a83aa22c
Create ExaGO Package ( #22734 )
...
Co-authored-by: Asher Mancinelli <asher.mancinelli@pnnl.gov>
2021-04-07 13:48:46 +02:00
Julius-Plehn
41ed95dbdf
iozone: adds 3.491 and fixes permissions ( #22817 )
2021-04-07 12:15:21 +02:00
Severin Strobl
b7d72e26bb
otf2: patch for uninitialized variable ( #22719 )
...
As pointed out in https://github.com/STEllAR-GROUP/hpx/issues/5239 ,
there is an issues in OTF2 <=2.2 where a variable is not properly
initialized. As currently no release of OTF2 is available fixing this,
the patch should be applied.
2021-04-07 11:55:24 +02:00
Vasileios Karakasis
58edc361be
ReFrame: add v3.5.1 and v3.5.2 ( #22820 )
2021-04-07 09:06:34 +00:00
Scott McMillan
51ac05483d
Update packages for NVIDIA HPC SDK 21.1 ( #21975 )
...
Co-authored-by: Scott McMillan <smcmillan@nvidia.com>
2021-04-07 09:41:43 +02:00
arjun-raj-kuppala
c188575cfe
roctracer-dev: add v4.1.0 ( #22812 )
2021-04-07 09:26:01 +02:00
Harmen Stoppels
3caf531f04
Add libxc 5.1.3 ( #22816 )
2021-04-07 09:23:26 +02:00
Brian Van Essen
4d417dcf2d
lbann: remove the specification of the high performance linkers ( #22818 )
...
Allow the user to put them on the command line.
2021-04-07 09:14:06 +02:00
archxlith
97d237dafa
py-scikit-image: add new version ( #22363 )
...
* [py-scikit-image] Added py-setuptools back into depends_on. Otherwise it is putting skimage in scikit_image-version-pyX.Y-arch.egg dir under site-packages
* [py-scikit-image] Added latest version
* [py-scikit-image] Added py-numpy version dependency when package version greater than 0.18
* [py-scikit-image] Updates to python dependency
* Fix typo
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-04-07 03:32:38 +00:00
Adam J. Stewart
dbdb72d0ea
py-statsmodels: add v0.12.2 ( #22620 )
2021-04-06 14:44:33 -07:00
Robert Mijakovic
50f5ec7abf
valgrind: add version 3.17.0 ( #22752 )
2021-04-06 13:57:48 -07:00
iarspider
0166f7db08
New package: Oracle instant client ( #22797 )
2021-04-06 13:56:33 -07:00
darmac
23422dcc59
tcpdump: add version 4.99.0 ( #22803 )
2021-04-06 13:33:43 -07:00
Xavier Delaruelle
9505af42ff
environment-modules: add version 4.7.1 ( #22811 )
2021-04-06 20:23:01 +00:00
Desmond Orton
838bba70c6
salmon: New patch ( #22686 )
2021-04-06 12:37:32 -07:00
