* Added support to LBANN, Hydrogen, DiHydrogen, and Aluminum to capture
a gcc-toolchain cxxflags argument and pass it to a CMAKE_CUDA_FLAG
argument when set. This helps deal with compiling with clang on
systems with old base gcc installations.
* Added a dependency on py-scipy when enabling tests on LBANN.
* Updated the C++ standard for Hydrogen to C++17.
* Added a new variant +apps to enable (or disable) python packages that
are used by applications in the LBANN repo, but are not strictly
required for building and using LBANN.
* Added a run time dependency for both py-pytest and py-scipy so that
they are activated in any environment.
* Added support for building LBANN, Hydrogen, and DiHydrogen with the
IBM ESSL BLAS library. This requires explicit identification of
additional LAPACK libraries, since ESSL does not implement LAPACK, but
is found by CMake.
* Fixed a bug in the LBANN dependency on OpenCV for Power architectures.
The +powerpc variant is only required for GCC toolchains and causes
Clang to break. Switched to only enabling when using %gcc on power.
- Installation often hangs building the documentation. This happens when
doxygen and latex are found. To avoid the issue, comment-out that part
of the code until an explicit cmake variable to disable documentation
generation is available.
* sundials: fix smoke tests
* sundials: add new version
* use cmake+make instead of make for tests, fix style
* use cmake_bin workaround from https://github.com/spack/spack/pull/28622
Note that the SDK is not the same as the system version: using
apple-clang@13 is a better match than `os=monterey` since this actually
fails on bigsur as well, as long as xcode 13 is being used.
* core: Make platform environment an instance not class method
In preparation for accessing data constructed in __init__.
* macos: set consistent macosx deployment target
This should silence numerous warnings from mixed gcc/macos toolchains.
* perl: prevent too-new deployment target version
```
*** Unexpected MACOSX_DEPLOYMENT_TARGET=11
***
*** Please either set it to a valid macOS version number (e.g., 10.15) or to empty.
```
* Stylin'
* Add deployment target overrides to failing autoconf packages
* Move configure workaround to base autoconf package
This reverts commit 3c119eaf8b4fb37c943d503beacf5ad2aa513d4c.
* Stylin'
* macos: add utility functions for SDK
These aren't yet used but should probably be added to spack debug
report.
This improves the stand-alone tests for slate by providing most
of the dependencies to the test framework and enabling stand-alone
tests on all versions except the oldest.
* AMReX: +tiny_profile
The tiny profiler options in AMReX are by default off but needed
by WarpX. Adds a new variant to control it.
* Add Erik Palmer as Co-Maintainer
... so he receives pings on updates of the package for review.
The version of the ONNX submodule was updated between the PyTorch
1.9 and 1.10 releases, which fixed builds with newer protobuf but
broke builds with older protobuf.
Also this adds minimum version reqs for numpy/typing-extensions
(which were not present before).
* gcc: revise patch range on darwin
* gcc: add conflict to work around bootstrap failure
closes#23296 . See https://gcc.gnu.org/bugzilla/show_bug.cgi?id=100340
.
```
Comparing stages 2 and 3
Bootstrap comparison failure!
gcc/tree-ssa-operands.o differs
gcc/tree-ssanames.o differs
gcc/ipa-inline.o differs
gcc/tree-ssa-pre.o differs
gcc/gimple-loop-interchange.o differs
...
```
639 total differences.
* gcc: bump conflict up to correct later version
Since in Spack we pull binaries out of the `warpx` package, we don't
need `py-cmake` to build `py-warpx`.
Generally, `py-cmake` in `pyproject.toml` is just a mean for us to
tell `pip` to make a `cmake` CLI tool available.
* added package gptune with all its dependencies: adding py-autotune, pygmo, py-pyaml, py-autotune, py-gpy, py-lhsmdu, py-hpbandster, pagmo2, py-opentuner; modifying superlu-dist, py-scikit-optimize
* adding gptune package
* minor fix for macos spack test
* update patch for py-scikit-optimize; update test files for gptune
* fixing gptune package style error
* fixing unit tests
* a few changes reviewed in the PR
* improved gptune package.py with a few newly added/improved dependencies
* fixed a few style errors
* minor fix on package name py-pyro4
* fixing more style errors
* Update var/spack/repos/builtin/packages/py-scikit-optimize/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* resolved a few issues in the PR
* fixing file permissions
* a few minor changes
* style correction
* minor correction to jq package file
* Update var/spack/repos/builtin/packages/py-pyro4/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* fixing a few issues in the PR
* adding py-selectors34 required by py-pyro4
* improved the superlu-dist package
* improved the superlu-dist package
* moree changes to gptune and py-selectors34 based on the PR
* Update var/spack/repos/builtin/packages/py-selectors34/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* improved gptune package: 1. addressing comments of tldahlgren in PR 26936; 2. adding variant openmpi
* fixing style issue of gptune
* changing file mode
* improved gptune package: add variant mpispawn which depends on openmpi; add variant superlu and hypre for installing the drivers; modified hypre package file to add a gptune variant
* fixing style error
* corrected pddrive_spawn path in gptune test; enforcing gcc>7
* fixing style error
* setting environment variables when loading gptune
* removing debug print in hypre/package.py
* adding superlu-dist v7.2.0; fixing an issue with CMAKE_INSTALL_LIBDIR
* changing site_packages_dir to python_platlib
* not using python3.9 for py-gpy, which causes due to dropped support of tp_print
* more replacement of site_packages_dir
* fixing a few dependencies in gptune; added a gptune version
* adding url for gptune
* minor correction of gptune
* updating versions in butterflypack
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* [py-xonsh] added py-xonsh package
* [py-xonsh] change dependency to python 3.6
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add sticky variants
* Add unit tests for sticky variants
* Add documentation for sticky variants
* Revert "Revert 19736 because conflicts are avoided by clingo by default (#26721)"
This reverts commit 33ef7d57c1.
* Add stickiness to "allow-unsupported-compiler"
- To retrieve the correct spack version we need to get it from the git
repo.
- Recommend installing the package with root for production
- Add Tomas as maintainer to sarus' spack package
- Add the option to disable unit tests in latest versions
Fixes the following build failure when building with gcc 11:
478 ../../../../CPP/7zip/Archive/Wim/WimHandler.cpp: In member function 'virtual LONG NArchive::NWim::CHandler::GetArchiveProperty(PROPID, PROPVARIANT*)':
>> 479 ../../../../CPP/7zip/Archive/Wim/WimHandler.cpp:308:11: error: use of an operand of type 'bool' in 'operator++' is forbidden in C++17
480 308 | numMethods++;
481 | ^~~~~~~~~~
>> 482 ../../../../CPP/7zip/Archive/Wim/WimHandler.cpp:318:9: error: use of an operand of type 'bool' in 'operator++' is forbidden in C++17
483 318 | numMethods++;
484 | ^~~~~~~~~~
