Commit Graph

18825 Commits

Author SHA1 Message Date
Nils Leif Fischer
38fee7e0da libogg: patch stdint include, add v1.3.5 (#28332)
Backport a patch for v1.3.4 that fixes an unsigned typedef problem
on macOS: https://github.com/xiph/ogg/pull/64

Also add v1.3.5 that has this issue fixed.
2022-01-12 09:17:52 -07:00
Andrew W Elble
b3043cae8f grace: workaround for buffer overflows (#28232)
spack paths can be long and this overflows (at least) these buffers
inside of the bundled T1lib inside of the grace distribution, leading
to crashes on startup.
2022-01-12 17:14:37 +01:00
kwryankrattiger
6c9b781e6e ECP-DAV: Propagate adios2 variant to paraview (#26747)
Depends on #26728 and #26175
2022-01-12 11:14:12 -05:00
Matthieu Dorier
04b9d87fca gptune: fix build by setting compilers to mpi wrappers (#28235) 2022-01-12 17:13:37 +01:00
Harmen Stoppels
868eaeb70e lmod: add v8.6.5 (#28353) 2022-01-12 08:26:43 -07:00
Nils Leif Fischer
0e1e705e15 charmpp: disable pre-7.0.0 macOS builds with clang@7: (#28221)
Charm++ versions below 7.0.0 have build issues on macOS, mainly due to the
pre-7.0.0 `VERSION` file conflicting with other version files on the
system: https://github.com/UIUC-PPL/charm/issues/2844. Specifically, it
conflicts with LLVM's `<version>` header that was added in llvm@7.0.0 to
comply with the C++20 standard:
https://en.cppreference.com/w/cpp/header/version. The conflict only occurs
on case-insensitive file systems, as typically used on macOS machines.
2022-01-12 15:53:49 +01:00
Adam J. Stewart
faaf38ca7d py-torch: use conditional variants (#28242) 2022-01-12 15:52:16 +01:00
Todd Gamblin
ff5e73d6eb package_hash: add test to ensure that every package in Spack can be unparsed
- [x] add option to canonical source to *not* filter multimethods
- [x] add test to unparse every package in builtin
2022-01-12 06:14:18 -08:00
Andrew W Elble
a38cdddd37 perl-tk: add missing dependencies (#28240) 2022-01-12 14:53:25 +01:00
Dylan Simon
2cf22ad5f2 e2fsprogs: fix non-root install (#28255) 2022-01-12 14:52:46 +01:00
snehring
640a4f7dcd poamsa: fix build errors for gcc10+ (#28262) 2022-01-12 14:09:55 +01:00
Danny McClanahan
435a241869 yarn: add runtime dependency on node-js@4.0: (#27654) 2022-01-12 13:05:49 +00:00
H. Joe Lee
a5ff3206f9 HDF5 GPU VFD: add new package. (#28272) 2022-01-12 13:59:51 +01:00
Melven Roehrig-Zoellner
5bb5bf3efb ITensor: add v3.1.10 and 'shared' variant (#28370) 2022-01-12 05:20:10 -07:00
Adam J. Stewart
55a62a1ee5 py-async-timeout: fix checksum issue (#28329) 2022-01-12 10:53:12 +01:00
Nils Leif Fischer
7fa81a66af libtheora: disable docs by default (#28330) 2022-01-12 10:24:58 +01:00
Nils Leif Fischer
4e0372b9b7 curl: add support for external detection (#28331) 2022-01-12 10:24:10 +01:00
kwryankrattiger
363a565ce3 Packaging: Virtual package for libllvm (#27200)
Add an abstraction around libllvm to allow libllvm
providers to be specified for all packages.

This is targeting allowing mesa to build against
llvm-amdgpu or intel-llvm or llvm or any other
custom llvm variant that arises for specific GPU
toolchains
2022-01-11 13:28:13 -08:00
Erik Schnetter
d4a468c160 memkind: add v1.12.0 (#28306) 2022-01-11 11:23:36 -07:00
Erik Schnetter
6690bb7411 openblas: New version 0.3.19 (#28308) 2022-01-11 16:55:23 +01:00
Adam J. Stewart
2ab871dd17 py-aiohttp: switch to PyPI tarball (#28333) 2022-01-11 14:33:02 +01:00
Adam J. Stewart
2ea8abef34 Open3D: add missing LLVM dep (#28334) 2022-01-11 14:32:34 +01:00
Erik Schnetter
67d9abb5f1 ffmpeg: add v4.4.1 (#28300) 2022-01-11 14:21:43 +01:00
Harmen Stoppels
f611eb0283 hdf5: prefer stable over experimental releases (#28340) 2022-01-11 10:32:28 +01:00
Harmen Stoppels
78debc1143 mbedtls: add v2.16.12, v2.28.0 and v3.1.0(#28281) 2022-01-11 10:28:58 +01:00
Adam J. Stewart
7b76e3982f Deprecate Python 2 installations (#28003)
* Deprecate Python 2 installations

* Deprecate py-python-meep

* Deprecate older easybuild backend libs

* Deprecate Python 3.6

* Deprecate miniconda2
2022-01-10 15:45:35 -06:00
Erik Schnetter
675210bd8b automake: New version 1.16.5 (#28299) 2022-01-10 21:33:14 +01:00
Erik Schnetter
0236e88af4 gawk: New version 5.1.1 (#28301) 2022-01-10 21:32:53 +01:00
Erik Schnetter
c939af8185 gdbm: New version 1.22 (#28302) 2022-01-10 21:32:40 +01:00
Erik Schnetter
33d8e8f31c grep: New version 3.7 (#28303) 2022-01-10 21:32:33 +01:00
Erik Schnetter
f678d5818f lorene: Beautify package title in documentation (#28305) 2022-01-10 21:32:20 +01:00
Erik Schnetter
4ef8e15ed3 wi4mpi: New version 3.5.0 (#28313) 2022-01-10 21:31:30 +01:00
Erik Schnetter
09ca7c4d9c wget: New version 1.21.2 (#28312) 2022-01-10 21:31:13 +01:00
Erik Schnetter
76d9adae8c openssl: New version 1.1.1m (#28310) 2022-01-10 21:30:58 +01:00
Adam J. Stewart
cc32b08205 Python: set default config_vars (#28290)
* Python: set default config_vars

* Add missing commas

* dso_suffix not present for some reason

* Remove use of default_site_packages_dir

* Use config_vars during bootstrapping too

* Catch more errors

* Fix unit tests

* Catch more errors

* Update docstring
2022-01-10 12:00:06 -06:00
Marcus Boden
5958306466 New packages: google-crc32c and py-google-crc32c (#28293) 2022-01-10 08:58:02 -06:00
Erik Schnetter
464d294b63 z3: New version 4.8.14 (#28314) 2022-01-10 14:31:52 +01:00
Erik Schnetter
b7f4a421e4 hwloc: New version 2.7.0 (#28298) 2022-01-10 12:00:51 +01:00
Peter Brady
fe64afb479 New package: petaca (#28326)
* Add the petaca fortran/c package

* Adopt date for version name and remove variants
2022-01-09 19:49:49 -05:00
luker
0277067e5f blaspp: set BLA_VENDOR for cray (#28104)
* for Cray's libsci in blaspp, set BLA_VENDOR=all

* Update package.py

* Update package.py

* Update package.py
2022-01-08 15:41:50 -05:00
Adam J. Stewart
334102addd SQLite: add new version/variant (#28204) 2022-01-08 12:57:57 -06:00
Erik Schnetter
52d475e89b openssh: New version 8.8p1 (#28325) 2022-01-08 13:10:28 +01:00
Martin Diehl
2bb844ee0e Damask improvements (#28178) 2022-01-08 06:50:38 -05:00
Jógvan Magnus Haugaard Olsen
897616f073 Dalton package: add versions and variants (#28226)
* Update existing 2020.0 version to use tag
* Add versions 2018.2 and master
* Add patches for GCC/Intel
* Use MPI compiler wrappers when +mpi
* Constrain CMake build dependency (need >= 3.1)
* Add variants for optional components (e.g QFIT library)
2022-01-07 18:59:17 -08:00
Anton Kozhevnikov
34f0222fdd ELPA package: don't check threading support during build (#28227)
./configure tries to execute an MPI test, which is not possible on
most HPC platforms (if you don't build on a compute node), so this
check is disabled to allow the build to proceed. Ideally we could
check this by placing constraints on the MPI that Spack builds (e.g.
require building a version that is guaranteed to have threading
support).
2022-01-07 18:13:46 -08:00
Peter Brady
d125bdfaa0 Catch2 package: add versions 2.13.8 and 3.0.0-preview4 (#28297) 2022-01-07 16:55:49 -08:00
Satish Balay
6a60201e80 petsc, py-petsc4py: add versions 3.16.3 (#28277) 2022-01-07 17:15:27 -06:00
Glenn Johnson
a3f5b712d3 py-pyzmq: adjust constraints for python-3.9 (#28264)
Version 18.1 builds with python-3.9
2022-01-07 15:08:02 -06:00
Filippo Spiga
b2336402a7 NVIDIA HPC SDK package: add version 22.1 (#28288) 2022-01-07 12:02:46 -08:00
Glenn Johnson
5091dc2124 r-kegg-db: mark deprecated, removed from bioconductor-3.13 (#28271) 2022-01-07 11:17:36 -07:00