Tom Scogland
3ce99cf4e1
fix for the shell arg handling issues
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The setup-env.sh script now saves off the argument array before shifting off
all the arguments so that the final command invocation doesn't arbitrarily
requote the arguments. All external quoting is preserved now. This has been
thoroughly tested with zsh, but should probably be tested with bash etc.
before acceptance.
2015-11-25 11:02:51 -08:00
Todd Gamblin
dd21a01dc4
Merge pull request #116 from mamelara/develop
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Added samtools bioinformatics software
2015-09-27 17:29:50 -07:00
Todd Gamblin
8818f4ac5e
Remove enabled variants from install prefix.
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- these make the prefix too long in many cases.
- users can figure out which install is which by querying.
2015-09-27 17:01:35 -07:00
Todd Gamblin
adbd393c39
Remove special characters (@, %, +, ~, etc) from stage name
2015-09-27 17:01:35 -07:00
Mario Melara
13eb461ec3
Adding bowtie2 package along with patch
2015-09-24 11:21:54 -07:00
Mario Melara
521632b3dc
Added samtools bioinformatics software
2015-09-23 16:30:44 -07:00
Todd Gamblin
6d4eed3845
Merge pull request #102 from RasmusWL/features/fish
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Add fish (shell) package
2015-09-23 01:37:59 -07:00
Todd Gamblin
82ea7aec51
Merge pull request #106 from justintoo/add-package-doxygen
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(Package) Add Doxygen (v1.8.10)
2015-09-23 01:37:31 -07:00
Todd Gamblin
d474eeb424
Merge pull request #110 from scalability-llnl/features/boostupdate
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update boost package for new releases
2015-09-23 00:32:22 -07:00
Todd Gamblin
5d6baacc56
Merge pull request #111 from scalability-llnl/features/protobuf
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add protobuf package
2015-09-23 00:31:26 -07:00
Todd Gamblin
46cf0a23d9
Merge pull request #112 from scalability-llnl/features/glog
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add glog package
2015-09-23 00:30:37 -07:00
Todd Gamblin
f02af701e5
Merge pull request #113 from scalability-llnl/features/gflags
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add gflags package
2015-09-23 00:29:50 -07:00
Todd Gamblin
5f826a0ab7
Merge pull request #114 from scalability-llnl/features/snappy
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Features/snappy
2015-09-23 00:27:27 -07:00
Todd Gamblin
ba83dd56a1
Merge pull request #115 from scalability-llnl/features/lmdb
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add lmdb package
2015-09-23 00:21:22 -07:00
Adam Moody
84823ed828
add lmdb package
2015-09-22 12:17:01 -07:00
Adam Moody
3ade141829
add leveldb package
2015-09-22 11:59:09 -07:00
Adam Moody
30acc6f2f0
add snappy package
2015-09-21 16:45:59 -07:00
Adam Moody
22ba02b22b
add gflags package
2015-09-21 16:40:23 -07:00
Adam Moody
b5d7cd55ce
add glog package
2015-09-21 16:30:11 -07:00
Adam Moody
e4e22ed17e
add protobuf package
2015-09-21 16:19:50 -07:00
Justin Too
99ca0f3153
(Package) Add Doxygen (v1.8.10)
2015-09-11 20:29:18 +00:00
Rasmus Wriedt Larsen
b06117f77a
Add fish (shell) package
2015-09-03 14:19:27 -07:00
Adam Moody
ac088bae6a
update boost
2015-09-01 16:02:14 -07:00
Todd Gamblin
c5c9ada7b0
Fix for GitHub #95
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develop: compiler clang@unknown created for /usr/bin/clang-format
https://github.com/scalability-llnl/spack/issues/95
2015-08-27 02:04:58 -07:00
Todd Gamblin
6af49d41fd
Add elfutils.
2015-08-27 00:10:53 -07:00
Todd Gamblin
13fd742610
Merge branch 'features/pidx' into develop
2015-08-26 23:48:52 -07:00
Todd Gamblin
babbc5bb45
Minor fix-ups for PIDX
2015-08-26 23:48:36 -07:00
Todd Gamblin
10bc981d0b
Merge pull request #28 in SCALE/spack from bugfix/scipy to develop
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# By Gregory L. Lee
# Via Gregory L. Lee
* commit '2c3e7a6f87ef5f8b5ba154b5a8b7da7a119f4a67':
added graphviz dependency and dysect variant to STAT
added graphviz and dependencies
use filter_file instead of patch
added lapack and blas deps, fixed gfortran compiler dependency
2015-08-26 22:12:14 -07:00
Gregory L. Lee
2c3e7a6f87
added graphviz dependency and dysect variant to STAT
2015-08-25 11:48:12 -07:00
Gregory L. Lee
1c9c5a385d
added graphviz and dependencies
2015-08-25 11:38:39 -07:00
Gregory L. Lee
689dbb8fb6
use filter_file instead of patch
2015-08-24 08:51:41 -07:00
Peer-Timo Bremer
40b21d7cbe
Initial version of PIDX package
2015-08-17 15:38:12 -07:00
Gregory L. Lee
bd1cd83d71
added lapack and blas deps, fixed gfortran compiler dependency
2015-08-17 11:54:14 -07:00
Gregory L. Lee
92ea86dc36
moved lapack package to netlib-lapack
2015-08-14 16:30:35 -07:00
Gregory L. Lee
ec47ab16ce
updated blas and lapack packages
2015-08-14 16:27:51 -07:00
Todd Gamblin
c8f65c1530
Fix 2.6 incompatibility
2015-08-13 00:21:02 -07:00
Todd Gamblin
a2b5b61e7f
Add .mailmap file
2015-08-13 00:18:19 -07:00
Todd Gamblin
17c2a0d6f3
Merge pull request #92 from trws/flux-build
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pre-alpha flux build and requisite dependencies
2015-08-13 00:02:49 -07:00
Todd Gamblin
58f848fa29
Merge pull request #94 from alfredo-gimenez/dev-pandas
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Fixed py-pandas package
2015-08-13 00:00:35 -07:00
Todd Gamblin
6f75f5bd6a
Merge pull request #88 from trws/git_depth_attempt
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adding a fallback on failure with git --depth
2015-08-12 23:59:13 -07:00
Todd Gamblin
f34b04e555
Merge pull request #87 from alfredo-gimenez/develop
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Added gui and cscope features to Vim package
2015-08-12 23:58:27 -07:00
Alfredo Gimenez
d6bf9c9887
Cscope vim variant depends on cscope
2015-08-07 07:58:04 -07:00
Alfredo Gimenez
d017c5080a
Fixed py-pandas package
2015-08-07 00:03:14 -07:00
Alfredo Gimenez
067ecb90b9
Added cscope (dependency for vim+cscope)
2015-08-06 09:28:28 -07:00
Todd Gamblin
1792115b4d
Use absolute paths to spack compiler wrappers in CC/CXX/F77/FC
2015-08-04 09:57:06 -07:00
Tom Scogland
7182671f8f
pre-alpha flux build and requisite dependencies
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NOTE: the ncurses package now installs *BOTH* versions, wide and non-wide
character for compatibility with packages that require either one. It may be
desirable for this to be an option in the future.
2015-08-03 11:59:52 -07:00
Todd Gamblin
7d80983362
Merge pull request #91 from nolta/patch-1
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add missing gmp dependency to mpfr package
2015-08-01 14:01:10 -07:00
Mike Nolta
7ebb4fcedc
add missing gmp dependency to mpfr package
2015-08-01 16:00:13 -04:00
Tom Scogland
016eef6a16
adding the bear compilation database generator
2015-07-29 14:21:03 -07:00
Tom Scogland
9174c06598
adding a fallback on failure with git --depth
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Certain remote protocols don't support the `--depth` option. Since this can't
be checked by URL type or in any sane way locally, this version attempts to
clone git repositories with the --depth option, and if that fails attempts the
clone again without it.
2015-07-27 14:03:04 -07:00
