Commit Graph

40549 Commits

Author SHA1 Message Date
Peter Brady
2f4c5f2aa2
libffi: add v3.4.7 (#49887)
* update libffi to 3.4.7
* Add conflict for libffi/apple-clang

---------

Co-authored-by: pbrady <pbrady@users.noreply.github.com>
2025-04-04 16:58:00 -06:00
Massimiliano Culpo
7e6a216d33
spack test run: add a --timeout argument (#49839)
* TestSuite: add type hints
* spack test run: add a --timeout argument
* pipelines: allow 2 minutes to run tests
* Fix docstrings, increase maximum pipelines time for tests to 5 mins.
* Use SIGTERM first, SIGKILL shortly after
* Add unit-tests for "start_build_process"

---------

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-04-04 15:48:48 -07:00
Francesco Rizzi
87bbcefba9
pressio: new package (#49592)
* pressio: add packages for pressio, pressio-ops, and pressio-log

* pressio: use symlinks for pressio-ops/log; specify compatible versions

* pressio: refactor supported versions, update pressio-ops to use main branch

* pressio: update package after renaming repository to pressio-rom

* pressio: remove unneeded if statement

---------

Co-authored-by: Caleb Schilly <cwschilly@gmail.com>
2025-04-04 15:56:47 -05:00
Thomas Padioleau
8ab1011192
kokkos-tools: add cxx language dependency (#49885) 2025-04-04 12:42:56 -06:00
Massimiliano Culpo
b2f8cd22c3
Update the "missing attribute in recipe" message (#49874)
Multiple build systems have been part of Spack for a long
time now, and they are rarely the cause of a missing attribute.

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-04-04 10:38:38 -07:00
Thomas-Ulrich
e6e58423aa
seissol: add v1.3.1 (#49878)
* seissol: new version
* split the long line
* also add netcdf max version
2025-04-04 10:36:49 -07:00
Alec Scott
5255af3981
go: add v1.24.2 (#49886) 2025-04-04 10:33:09 -07:00
Thomas-Ulrich
5d913d0708
easi: add c compiler dependence (#49877) 2025-04-04 09:41:04 -07:00
Chris Marsh
5fda19194b
vtk: fix PYTHONPATH (#49773)
* Ensure PYTHONPATH is set for vtk+python

* style

* switch to extends
2025-04-04 10:04:47 -05:00
Harmen Stoppels
3ea92b1983
conditional: fix value type (#49882) 2025-04-04 15:31:44 +02:00
Harmen Stoppels
522fa9dc62
test/variant.py: fix broken test (#49879) 2025-04-04 11:13:50 +02:00
Caetano Melone
65ec330af5
fix: intel compiler alias intel-typo (#49870)
This typo was causing issues when concretizing specs with "%intel"
2025-04-04 08:51:48 +02:00
Dom Heinzeller
72c1d0033f
Add p4est@2.8.7 (#49859) 2025-04-03 23:32:45 -06:00
Harmen Stoppels
6bfe83106d
Concrete multi-valued variants (#49756)
Similar to the range-or-specific-version ambiguity of `@1.2` in the past,
which was solved with `@1.2` vs `@=1.2` we still have the ambiguity of
`name=a,b,c` in multi-valued variants. Do they mean "at least a,b,c" or
"exactly a,b,c"?

This issue comes up in for example `gcc languages=c,cxx`; there's no
way to exclude `fortran`.

The ambiguity is resolved with syntax `:=` to distinguish concrete from
abstract.

The following strings parse as **concrete** variants:

* `name:=a,b,c` => values exactly {a, b, c}
* `name:=a` => values exactly {a}
* `+name` => values exactly {True}
* `~name` => values exactly {False}

The following strings parse as **abstract** variants:

* `name=a,b,c` values at least {a, b, c}
* `name=*` special case for testing existence of a variant; values are at
  least the empty set {}

As a reminder

* `satisfies(lhs, rhs)` means `concretizations(lhs)` ⊆ `concretizations(rhs)`
* `intersects(lhs, rhs)` means `concretizations(lhs)` ∩ `concretizations(rhs)` ≠ ∅

where `concretizations(...)` is the set of sets of variant values in this case.

The satisfies semantics are:

* rhs abstract: rhs values is a subset of lhs values (whether lhs is abstract or concrete)
* lhs concrete, rhs concrete: set equality
* lhs abstract, rhs concrete: false

and intersects should mean

* lhs and rhs abstract: true (the union is a valid concretization under both)
* lhs or rhs abstract: true iff the abstract variant's values are a subset of the concrete one
* lhs concrete, rhs concrete: set equality

Concrete specs with single-valued variants are printed `+foo`, `~foo` and `foo=bar`;
only multi-valued variants are printed with `foo:=bar,baz` to reduce the visual noise.
2025-04-04 04:47:43 +00:00
suzannepaterno
d37e2c600c
Add TotalView 2024.4 & 2025.1 (#49858)
Update to include the latest versions of Totalview and remove retired and interim maintainers.
2025-04-03 22:37:43 -06:00
Vicente Bolea
db9630e9e0
ascent: add rocm capabilities (#48517) 2025-04-03 14:30:45 -05:00
Zack Galbreath
136a658746
ci: replace 'graviton3' with 'neoverse_v1' (#49860)
neoverse_v1 matches the name of the stack and more accurately captures
the requirement for these jobs. The relevant runners in GitLab already
bear both tags, so this shouldn't affect how jobs get assigned to runners.
2025-04-03 14:24:39 -05:00
Adam J. Stewart
f0bfc7d898
py-keras: add v3.9.2 (#49856) 2025-04-03 20:48:20 +02:00
Alex Richert
03ebb82752
bufr: add v12.2.0 plus several updates (#49850)
* bufr: add test file resource and set LD_LIBRARY_PATH in setup_build_environment (python tests)
2025-04-03 10:47:41 -07:00
Alex Richert
82d808d58d
g2: disable one problematic unit test for intel@:2022 (#49851) 2025-04-03 10:44:17 -07:00
Alex Richert
43fa93c8e1
wrf-io: add make test (#49852) 2025-04-03 10:41:39 -07:00
Adam J. Stewart
aa70cb34e1
py-shapely: add v2.1.0 (#49857) 2025-04-03 10:39:01 -07:00
Richard Berger
9acb70f204
kokkos: add v4.6.00 (#49810)
* kokkos: add version 4.6.00

* kokkos-kernels: add version 4.6.00

* kokkos-nvcc-wrapper: add version 4.6.00 and update url to match kokkos releases

* kokkos: add zen4 support
2025-04-03 10:26:25 -07:00
Daniele Colombo
8296788730
deconwolf: new package (#49801)
* deconwolf: add new package

* fix deconwolf patch: add full_index=1

* deconwolf: fix spack license string

* deconwolf: add commit to version

Co-authored-by: Alec Scott <hi@alecbcs.com>

* deconwolf: use url before git

Co-authored-by: Alec Scott <hi@alecbcs.com>

---------

Co-authored-by: Alec Scott <hi@alecbcs.com>
2025-04-03 10:15:10 -07:00
Frédéric Simonis
31a8dc6f6c
precice: Add version 3.2.0 (#49833) 2025-04-03 10:12:06 -07:00
Massimiliano Culpo
b1ac661ba8
Simplify a few methods in environments (#49682)
Return a single scope from environment.env_config_scope
Return a single scope from environment_path_scope

---------

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-04-03 18:19:04 +02:00
Greg Becker
63b437ddf9
py-black: add v24.4.0 -> 25.1.0 (#49814)
Signed-off-by: Gregory Becker <becker33@llnl.gov>
Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2025-04-03 16:48:18 +02:00
Rob Falgout
578675cec8
Update package.py (#49843)
Adding hypre release 2.33.0
2025-04-03 05:44:08 -06:00
Harmen Stoppels
751c79872f
variant.py: make Variant.default is str | bool | tuple[str] (#49836)
Warn if variant default is not among those types
2025-04-03 11:07:08 +00:00
Samuel Browne
22f26eec68
binder: add dependency on C (#49838) 2025-04-03 12:04:57 +02:00
Daryl W. Grunau
4ec2016f56
glproto, inputproto, kbproto, libpthread-stubs, randrproto, renderproto, xextproto, xproto, xsimd, xtensor, xtensor-blas, xtl: add c dependency (#49823) 2025-04-03 12:03:59 +02:00
Massimiliano Culpo
5c71d36330
compiler-wrapper: set SPACK_COMPILER_EXTRA_RPATHS (#49828)
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-04-03 11:23:08 +02:00
Kyle Brindley
035096006e
py-waves: new package (#49805) 2025-04-02 15:46:01 -07:00
Weiqun Zhang
1f797208bc
amrex: add v25.04 (#49848) 2025-04-02 14:55:45 -07:00
Wouter Deconinck
aa41fe05ff
qt-*: add v6.8.3, v6.9.0 (#49840)
* qt-base: add v6.8.3, v6.9.0
* qt-declarative: add v6.8.3, v6.9.0
* qt:-quick3d: add v6.8.e, v6.9.0
* qt-quicktimeline: add v6.8.3, v6.9.0
* qt-tools: add v6.8.3, v6.9.0
* qt-svg: add v6.8.3, v6.9.0
* qt-5compat: add v6.8.3, v6.9.0
* qt-shadertools: add v6.8.3, v6.9.0
2025-04-02 14:39:59 -07:00
Richard Berger
f4792c834e
portage, tangram, wonton: update packages (#49829) 2025-04-02 19:53:14 +02:00
Satish Balay
98ca90aebc
slepc, py-slepc4py, petsc, py-petsc4py add v3.23.0 (#49813) 2025-04-02 10:08:56 -07:00
Mikael Simberg
991f26d1ae
pika: Add 0.33.0 (#49834) 2025-04-02 10:58:24 -06:00
eugeneswalker
973a7e6de8
e4s oneapi: upgrade to latest compilers oneapi@2025.1 (#47317)
* e4s oneapi: upgrade to latest compilers oneapi@2025.1

* update specs and package preferences

* enable some more dav packages

* enable additional specs

* e4s oneapi: packages: elfutils does not have bzip2 variant

* e4s oneapi: packages: elfutils does not have xz variant

* e4s oneapi: comment out heffte+sycl

* comment out e4s oneapi failures

* comment out more failures

* comment out failing spec
2025-04-02 09:21:49 -07:00
Cory Quammen
528ba74965
paraview: add v5.13.3 (#49818)
* Revert "paraview: add patch for Intel Classic compilers (#49116)"

This reverts commit 7a95e2beb5.

We'll mark Intel Classic compilers as conflicting with ParaView
versions 5.13.0-5.13.2 instead since 5.13.3 is available and can be
built with with those compilers.

* Add conflict for Intel Class compilers and ParaView 5.13.0-5.13.2.

* paraview: add new v5.13.3 release
2025-04-02 10:53:19 -05:00
eugeneswalker
73034c163b
rocm 6.3.3 updates (#49684) 2025-04-02 08:44:06 -07:00
Massimiliano Culpo
62ee56e8a3
docs: remove leftover references to compiler: entries (#49824)
Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-04-02 09:33:23 +02:00
Massimiliano Culpo
01471aee6b
solver: don't use tags to compute injected deps (#49723)
This commit reorders ASP setup, so that rules from
possible compilers are collected first.

This allows us to know the dependencies that may be
injected before counting the possible dependencies,
so we can account for them too.

Proceeding this way makes it easier to inject
complex runtimes, like hip.

Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2025-04-02 09:32:25 +02:00
Afzal Patel
c004c8b616
rocm-opencl: change homepage and git (#49832) 2025-04-02 09:19:40 +02:00
Harmen Stoppels
0facab231f
spec.py: more virtuals=... type hints (#49753)
Deal with the "issue" that passing a str instance does not cause a
type check failure, because str is a subset of Sequence[str] and
Iterable[str]. Instead fix it by special casing the str instance.
2025-04-02 00:05:00 -07:00
Greg Becker
ca64050f6a
config:url_fetch_method: allow curl args (#49712)
Signed-off-by: Gregory Becker <becker33@llnl.gov>
2025-04-01 15:23:28 -05:00
Jonas Eschle
91b3afac88
Add py-tf-keras package, upgrade TFP (#43688)
* enh: add tf-keras package, upgrade TFP

* chore:  remove legacy deps

* chore:  fix style

* chore:  fix style

* fix: url

* fix: use jax, tensorflow instead of py-jax, py-tensorflow

* fix: remove typo

* Update var/spack/repos/builtin/packages/py-tensorflow-probability/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* fix: typos

* fix: swap version

* fix: typos

* fix: typos

* fix: typos

* chore: use f strings

* enh: move tf-keras to pypi

* [@spackbot] updating style on behalf of jonas-eschle

* fix: t

* enh: add tf-keras package, upgrade TFP

* chore:  remove legacy deps

* chore:  fix style

* chore:  fix style

* fix: url

* fix: use jax, tensorflow instead of py-jax, py-tensorflow

* fix: remove typo

* Update var/spack/repos/builtin/packages/py-tensorflow-probability/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* fix: typos

* fix: swap version

* fix: typos

* fix: typos

* fix: typos

* chore: use f strings

* enh: move tf-keras to pypi

* [@spackbot] updating style on behalf of jonas-eschle

* enh: move tf-keras to pypi

* enh: move back to releases to make it work, actually

* enh: move back to releases to make it work, actually

* fix:change back to tar...

* Fix concretisation: py-tf-keras only has 2.17, not 2.16, fix checksum

* enh: add TFP 0.25

* enh: add tf-keras 2.18

* chore: fix style

* fix: remove patch

* maybe fix license

* Update var/spack/repos/builtin/packages/py-tf-keras/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* fix:  pipargs global?

* Update var/spack/repos/builtin/packages/py-tf-keras/package.py

Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>

* chore: fix formatting

* chore: fix formatting again

* fix:  pathes in spack

* fix:  typo

* fix:  typo

* use github package

* use pip install

* fix typo

* fix typo

* comment 2.19 out

* fix typo

* fix typo

* fix typo

* chore: remove unused patch file

* chore: cleanup

* chore: add comment about TF version

* chore: remove unused Bazel, cleanup imports

* [@spackbot] updating style on behalf of jonas-eschle

* chore: add star import, degrading readability

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: jonas-eschle <jonas-eschle@users.noreply.github.com>
Co-authored-by: Bernhard Kaindl <contact@bernhard.kaindl.dev>
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2025-04-01 20:12:57 +02:00
Alec Scott
0327ba1dfe
py-python-lsp-ruff: new package (#49764)
* py-python-lsp-ruff: new package
* Add git and main versions to both for development
2025-04-01 10:32:49 -07:00
Vanessasaurus
67f091f0d9
flux-core: cffi needing for linking (#49656)
* Automated deployment to update package flux-core 2025-03-23

* cffi also needed for runtime

---------

Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2025-04-01 10:24:57 -07:00
Robert Maaskant
c09759353f
trivy: new package (#49786) 2025-04-01 09:46:04 -07:00