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Author SHA1 Message Date
Adam J. Stewart
44196085f6 py-psycopg2: add v2.9.6 (#37235) 2023-04-28 11:50:27 +02:00
John Jolly
076660804d bricks: Fix package to properly find spack opencl-clhpp (#37239) 
The bricks package uses header from the opencl-clhpp package when built with
the cuda variant activated. In order to find the header files, the bricks
CMakeLists.txt uses the `find_package(OpenCL 2.0)` statement. The CMake
FindOpenCL module searches several paths to find the header files. Eventually
it will search for header files in the local /usr/include directories. If
OpenCL headers are found, but CUDA is not installed locally, then the build
will fail.

One of the CMake variables searched for a path to the OpenCL headers is
OCL_ROOT. This fix utilizes the OCL_ROOT variable to identify the correct path
to the install opencl-clhpp package within Spack. Also, if the cuda variant is
not used, then the OpenCL build is disabled to prevent a build failure due to
improperly-identified locally-installed OpenCL header files.

The default behavior of the build process has not changed. An external variable
definitions must be made to activate these features. Specifically, to disable
the OpenCL build, this flag must be provided to CMake:

    -DBRICK_USE_OPENCL=OFF

The Spack build process explicitly uses this option unless the cuda variant is
specified. If the cuda variant is specified, then the BRICK_USE_OPENCL variable
is set to ON and the OCL_ROOT variable is set to the path of the opencl-clhpp
include directory.
 2023-04-28 11:37:22 +02:00
Alec Scott
e57db5c528 apfel: add v3.0.6 (#37267) 2023-04-28 11:18:05 +02:00
Alec Scott
01cdc4f960 cmor: add v3.7.2 (#37268) 2023-04-28 11:17:44 +02:00
Alec Scott
93e88853c6 figtree: add v1.4.4 (#37269) 2023-04-28 11:17:31 +02:00
Alec Scott
561c192e30 fping: add v5.1 (#37270) 2023-04-28 11:17:16 +02:00
Alec Scott
65c625a44f gapbs: add v1.4 (#37271) 2023-04-28 11:16:55 +02:00
Alec Scott
08291cb63d glfw: add v3.3.8 (#37272) 2023-04-28 11:16:41 +02:00
Alec Scott
dcd0f8d252 jemalloc: add v5.3.0 (#37273) 2023-04-28 11:14:12 +02:00
Alec Scott
fa0367691e sandbox: add v2.25 (#37274) 2023-04-28 11:13:56 +02:00
Alec Scott
e3a76bf2a9 snap-berkeley: add v2.0.3 (#37275) 2023-04-28 11:13:39 +02:00
Alec Scott
e2f9cdfbdc tcpdump: add v4.99.4 (#37276) 2023-04-28 11:13:22 +02:00
Alec Scott
1eb4e30d28 wps: add v4.5 (#37277) 2023-04-28 11:12:28 +02:00
Sangu Mbekelu
2f529a7320 py-subword-nmt (#37161) 
* "new py-subword-nmt package"

* [@spackbot] updating style on behalf of Sangu-Mbekelu

* Update package.py

updating package based on review

* [@spackbot] updating style on behalf of Sangu-Mbekelu

---------

Co-authored-by: Sangu Mbekelu <s.mbekelu9@gmail.com>
 2023-04-28 00:22:45 -04:00
Manuela Kuhn
cb4234b971 py-virtualenv: add 20.22.0 (#37259) 
* py-virtualenv: add 20.22.0

* [@spackbot] updating style on behalf of manuelakuhn

* Fix dependency versions for release 20.22.0

* Remove python version restrictions

* [@spackbot] updating style on behalf of manuelakuhn

* py-platformdirs: add 3.5.0

* py-filelock: add 3.12.0

* Fix dependency bound for py-platformdirs

* py-importlib-metadata: add 6.6.0
 2023-04-27 22:28:18 -05:00
Adam J. Stewart
ee7cdb8a68 macOS: use Apple GL/GLU by default (#36618) 
* macOS: use Apple GL/GLU by default

* Use CLT instead

* Use CLT instead

* Undo change to libuuid
 2023-04-27 21:54:48 -05:00
eugeneswalker
7dc0bf5fcb legion: add versions up to 23.03.0 (#37257) 
* legion: add versions up to 23.03.0

* add maintainer
 2023-04-27 19:17:42 -04:00
Chris Green
d01b542df7 [py-breathe] New version 4.35.0 (#37233) 
* [py-breathe] New version 4.35.0

* Update var/spack/repos/builtin/packages/py-breathe/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2023-04-27 13:57:31 -04:00
Thomas-Ulrich
c59eb8cdea fixes #29350 by enabling headers variant in binutils when compiling llvm with gold (#37245) 2023-04-27 09:53:45 -07:00
Manuela Kuhn
ed34c4a004 py-memory-profiler: add 0.61.0 (#37248) 2023-04-27 11:38:08 -05:00
Chris Green
7cbaf2ff56 [py-sphinx-design] New versions 0.4.0, 0.4.1 (#37234) 
* [py-sphinx-design] New versions 0.4.0, 0.4.1

* conflicts() -> depends_on()

Per @adamjstewart

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
 2023-04-27 11:37:23 -05:00
Massimiliano Culpo
cd851e173d gcc: add v13.1.0 (#37230) 
version 13.1 builds with apple-clang@14.0.3
 2023-04-27 16:41:44 +02:00
Harmen Stoppels
8be2f017e7 gcc: no need to special case macos/linux wrt rpaths (#37243) 2023-04-27 15:52:28 +02:00
Michael Kuhn
f6464abfcb Fix pkgconfig dependencies (#37236) 
Packages shouldn't typically depend on pkg-config or pkgconf but on the
virtual provider pkgconfig.
 2023-04-27 10:04:22 +02:00
Alec Scott
ce81f15e6f r-covr: add v3.6.2 (#37194) 2023-04-27 02:22:29 -04:00
Wouter Deconinck
4d597bdecc py-gssapi: depends_on krb5 (#37227) 
This dependency was somehow overlooked (but is pretty crucial) because it doesn't appear in the python requirements...
 2023-04-26 22:35:15 -04:00
Manuela Kuhn
62ea6bed89 py-bidscoin: add 4.0.0 and py-pydeface as new deb package (#37231) 2023-04-26 20:58:57 -04:00
Manuela Kuhn
742fbd458d py-mypy: add 1.2.0 (#37224) 2023-04-26 20:54:11 -04:00
Manuela Kuhn
10b6651d35 py-flake8: add 6.0.0 and update dependencies (#37222) 2023-04-26 20:53:49 -04:00
Alec Scott
3f3fc804c6 r-afex: add v1.2-1 (#37188) 2023-04-26 19:36:53 -05:00
Alec Scott
c7d586d03a r-argparse: add v2.2.2 (#37189) 2023-04-26 19:36:11 -05:00
Alec Scott
b17feb9b06 r-bit: add v4.0.5 (#37190) 2023-04-26 19:35:30 -05:00
Alec Scott
2e4a9f1abf r-loo: add v2.6.0 (#37205) 
* r-loo: add v2.6.0

* Split r dependency from other deps to align with common r package style
 2023-04-26 19:34:19 -05:00
Alec Scott
117d374a61 r-bookdown: add v0.33 (#37191) 
* r-bookdown: add v0.33

* Add r@3.5.0: dependency to package
 2023-04-26 19:33:18 -05:00
Alec Scott
67cf37d750 r-compositions: add v2.0-6 (#37192) 
* r-compositions: add v2.0-6

* Split r dependecies from other r packages to match common format
 2023-04-26 19:32:15 -05:00
Alec Scott
6e276ecb4c r-convevol: add v2.0.0 (#37193) 2023-04-26 19:31:34 -05:00
Alec Scott
8c6a3f15e5 r-desolve: add v1.35 (#37195) 2023-04-26 19:29:14 -05:00
Alec Scott
65bbd2a1e6 r-fastmap: add v1.1.1 (#37196) 2023-04-26 19:27:49 -05:00
Alec Scott
426f8e987b r-formatr: add v1.14 (#37197) 2023-04-26 19:27:11 -05:00
Alec Scott
a78e061117 r-ggvis: add v0.4.8 (#37198) 2023-04-26 19:26:24 -05:00
Alec Scott
17e14757e2 r-glmnet: add v4.1-7 (#37199) 
* r-glmnet: add v4.1-7

* Split r dependency from other deps to follow common format
 2023-04-26 19:25:42 -05:00
Alec Scott
2bb3553f24 r-insight: add v0.19.1 (#37200) 2023-04-26 19:24:55 -05:00
Alec Scott
6267a1f68d r-interp: add v1.1-4 (#37201) 
* r-interp: add v1.1-4

* split r dep from other dependencies to match common format
 2023-04-26 19:24:08 -05:00
Alec Scott
666ceb998c r-jomo: add v2.7-6 (#37202) 2023-04-26 19:23:09 -05:00
Alec Scott
e4cc4018c1 r-lattice: add v0.21-8 (#37204) 
* r-lattice: add v0.21-8

* Enforce a higher version of R as according to cran
 2023-04-26 19:12:26 -05:00
Alec Scott
5551b7a506 r-magic: add v1.6-1 (#37206) 2023-04-26 19:06:27 -05:00
Alec Scott
facc93a30e r-maptools: add v1.1-6 (#37207) 2023-04-26 19:05:29 -05:00
Alec Scott
b3101d1c85 r-meta: add v6.2-1 (#37208) 2023-04-26 19:04:07 -05:00
H. Joe Lee
0d7890baa5 spdk: add a new package (#35520) 
* spdk: add a new package
* chore: fix formatting and style
* fix: add rdma-core dependency
* fix: remove spdk < 23.01 versions per @soumagne review
* spdk: add 22.01.1 version
* spdk: address @soumagne reviews
* spdk: fix fio audit failure
* spdk: fix fio version and remove debugging info
 2023-04-26 16:38:14 -07:00
Wouter Deconinck
d43ae9fa10 scitokens-cpp: depends_on pkgconfig (#37168) 
A missing dependency, showing up as:
```console
#24 1113.1 3 errors found in build log:
#24 1113.1      20    -- Check for working CXX compiler: /opt/spack/lib/spack/env/gcc/g++ 
#24 1113.1            - skipped
#24 1113.1      21    -- Detecting CXX compile features
#24 1113.1      22    -- Detecting CXX compile features - done
#24 1113.1      23    -- Found CURL: /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/curl-
#24 1113.1            7.85.0-ca5zznsdkp2hwbnikha6sgqzcpuw74sc/lib/libcurl.so (found versio
#24 1113.1            n "7.85.0")
#24 1113.1      24    -- Found UUID : /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/util
#24 1113.1            -linux-uuid-2.38.1-45xrjgjjauvev5qarwji7xgmlnhqlzkh/lib/libuuid.so
#24 1113.1      25    -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE)
#24 1113.1   >> 26    CMake Error at /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/cmake
#24 1113.1            -3.24.3-6doi3daa6ihw6mk4zbk5oiiuiaahsny7/share/cmake-3.24/Modules/Fi
#24 1113.1            ndPkgConfig.cmake:663 (message):
#24 1113.1      27      pkg-config tool not found
#24 1113.1      28    Call Stack (most recent call first):
#24 1113.1      29      /opt/software/linux-debian-x86_64_v3/gcc-12.2.0/cmake-3.24.3-6doi3
#24 1113.1            daa6ihw6mk4zbk5oiiuiaahsny7/share/cmake-3.24/Modules/FindPkgConfig.c
#24 1113.1            make:829 (_pkg_check_modules_internal)
#24 1113.1      30      CMakeLists.txt:39 (pkg_check_modules)
#24 1113.1      31    
#24 1113.1      32    
```

Ref: https://github.com/scitokens/scitokens-cpp/blob/v1.0.0/CMakeLists.txt#L32
 2023-04-27 00:02:55 +02:00