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Author SHA1 Message Date
Stephen Sachs
79f22423b8 intel compiler: fix link time error with LLVMgold.so (#28731) 
The Intel compiler will, at link time, call `ld -plugin LLVMgold.so`, which
expects libraries like `libimfo.so` to be found either in the `LD_LIBRARY_PATH` or
in `LLVMgold.so`s RPATH.

As `LLVMgold.so` already uses RUNPATH, I used that to extend this to the
necessary library locations.

This PR should fix issues:
https://github.com/spack/spack/issues/10308
https://github.com/spack/spack/issues/18606
https://github.com/spack/spack/issues/17100
https://github.com/spack/spack/issues/21237
https://github.com/spack/spack/issues/4261

Co-authored-by: Stephen Sachs <stesachs@amazon.com>
 2022-02-15 17:47:29 +00:00
Harmen Stoppels
cebe4fdf1d Make spack -e [env] spec show environment root specs (#25941) 2022-02-15 09:42:05 -08:00
Anton Kozhevnikov
d61c1f623c SIRIUS: optionlal dependency on Python (#28711) 
* depend on Python only when building the module

* fixes for shared costa libray

* add deprecated=True for old packages
 2022-02-15 10:23:37 -07:00
Harmen Stoppels
55996d3ad4 Unalias despacktivate only when alias exists (#28939) 2022-02-15 16:21:19 +01:00
acastanedam
3640c258dc direnv: fix installation procedure (#28940) 
Setting Spack's `$prefix` to `$DESTDIR` and not to `$PREFIX` install the
package in `$prefix/usr/local` and not in `$prefix`, thus when it is
loaded the executable `direnv` in not "seen" by the environment.
 2022-02-15 08:17:41 -07:00
Nils Vu
a8d440d3ab spectre: patch Boost pre v1.67 (#28931) 2022-02-15 15:13:13 +01:00
dlkuehn
7fc9c16f9e genometools: add v1.6.2 (#28936) 
Co-authored-by: las_dkuehn <las_dkuehn@gilman-0107-02.las.iastate.edu>
 2022-02-15 15:11:38 +01:00
Wouter Deconinck
6864b28fd8 dd4hep: add v1.20 (#28937) 
No major changes to the build system, https://github.com/AIDASoft/DD4hep/compare/v01-19...v01-20
 2022-02-15 15:06:43 +01:00
Cody Balos
cf0c9affff sundials: use make for some of the smoke tests (#28938) 2022-02-15 15:03:58 +01:00
Mark W. Krentel
09a8656f1f meson: add versions 0.61.2 and 0.60.3 (#28934) 2022-02-15 05:20:34 -07:00
Manuela Kuhn
9f1c6c0c29 py-anyio: add 3.5.0 (#28915) 
* py-anyio: add 3.5.0

* Add wheel dependency
 2022-02-15 03:38:17 -07:00
Mikael Simberg
fdec3b47cc apex: add patch to install missing header (#28844) 
Co-authored-by: Mikael Simberg <mikael.simberg@iki.if>
 2022-02-15 01:59:39 -07:00
Daniele Cesarini
c313a72e76 New quantum-espresso maintainer (#28927) 2022-02-15 09:32:46 +01:00
Manuela Kuhn
28caa0225f py-attrs: add 21.4.0 (#28914) 2022-02-14 22:50:55 -07:00
Manuela Kuhn
30fafa63e0 py-jsonschema: add 4.4.0 (#28919) 2022-02-14 22:50:37 -07:00
Seth R. Johnson
08cad7d0ee darwin: make sure MACOSX_DEPLOYMENT_TARGET has a minor component (#28926) 2022-02-15 05:50:22 +00:00
luker
9165e3fb86 updated cray-fftw (#28922) 
added the latest cray-fftw version, added myself as a maintainer, updated the homepage
 2022-02-14 22:14:39 -07:00
Pierre Neyron
d54a5d9dd8 py-pyopencl: fix dependency to py-six (#28916) (#28917) 2022-02-14 19:59:25 -07:00
Sreenivasa Murthy Kolam
76489eb213 replace mesa18 recipe with mesa recipe for the rocm releases (#28491) 2022-02-14 16:29:45 -06:00
ravil-mobile
64dd6378d4 easi: add new package (#28828) 
Co-authored-by: ravil <ravil.dorozhinskii@tum.de>
 2022-02-14 15:29:32 -07:00
Manuela Kuhn
67ea14098d py-bids-validator: add 1.8.9 (#28913) 2022-02-14 14:53:29 -07:00
MichaelLaufer
5b80c4ab6c New package: py-pyfr (#28847) 
* Initial support for PyFR

* styling

* fixes

* more syling fixes

* fixes for dependencies

* add min rocblas version
 2022-02-14 15:43:18 -06:00
Tom Vander Aa
1377c02e26 intel-oneapi-mpi: set I_MPI_ROOT in setup_dependent_build_environment (#28890) 
* setting I_MPI_ROOT is sometimes needed for find_package(MPI) in cmake to work
 2022-02-14 13:23:35 -07:00
Thomas Madlener
13013d0291 fastjet add v3.3.4, fjcontrib add v1.045 (#22667) 2022-02-14 13:23:06 -07:00
estewart08
fe35ce1843 AMD rocm-openmp-extras: add v4.5.2 (#28790) 2022-02-14 10:14:44 -07:00
Toyohisa Kameyama
5353032eef Python: fix build with Fujitsu compiler (#28744) 2022-02-14 08:06:34 -06:00
Olli Lupton
dc57f987a7 py-{mizani,plotnine}: add packages. (#28841) 
* py-{mizani,plotnine}: add packages.

* Add missing python dependency.
 2022-02-14 03:20:29 -07:00
G-Ragghianti
aa6e725633 magma: move the execution of stand-alone tests to preferred directory (#28895) 2022-02-14 11:19:45 +01:00
John Wohlbier
9649246764 palisade-development: change fppe-logreg variant to point to a stable tag instead of a branch (#28717) 
Co-authored-by: John Wohlbier <jgwohlbier@sei.cmu.edu>
 2022-02-14 11:18:38 +01:00
Adam J. Stewart
b0658b8b03 py-pandas: add v1.4.1 (#28904) 2022-02-14 11:01:13 +01:00
Adam J. Stewart
e0a0f41ff9 py-mypy: add new versions (#28905) 2022-02-14 11:01:00 +01:00
Seth R. Johnson
3a4ab5f96f trilinos: disable UVM for 13.2+ (#28879) 2022-02-14 10:54:15 +01:00
Jen Herting
2c56cbd2bc [py-ctgan] fixed py-torchvision version range (#28892) 2022-02-13 22:26:10 -07:00
Harmen Stoppels
bece9fd823 Bump libtree (#28908) 2022-02-13 15:50:15 -08:00
Seth R. Johnson
97e4b43ddc go: mark conflict for ancient compilers (#28888) 2022-02-13 14:20:27 -07:00
Adam J. Stewart
cab0e4cb24 py-grpcio: add v1.43.0 (#28784) 2022-02-12 20:13:21 +01:00
Sarah Osborn
8c943261a2 hypre: add v2.24.0 (#28896) 2022-02-12 12:47:55 +01:00
Steve Leak
9f1db4e3a5 cray: add NVIDIA to the list of canonical names (#28246) 2022-02-12 10:45:46 +01:00
Adam Moody
0a25370e78 lwgrp/dtcmp packages: add version 1.0.5 and 1.1.4, respectively(#28817) 2022-02-11 18:52:51 -08:00
Olli Lupton
b840557d64 ffmpeg package: add libx264 variant; fix license variants. (#28808) 
Prior to this patch, setting +gpl did not pass --enable-gpl and
did not allow GPL-only codecs to be enabled.
 2022-02-11 18:40:35 -08:00
Brian Van Essen
fc7b7cfeab LBANN SW stack packages: gcc-toolchain and clang support (#28769) 
* Added support to LBANN, Hydrogen, DiHydrogen, and Aluminum to capture
  a gcc-toolchain cxxflags argument and pass it to a CMAKE_CUDA_FLAG
  argument when set.  This helps deal with compiling with clang on
  systems with old base gcc installations.
* Added a dependency on py-scipy when enabling tests on LBANN.
* Updated the C++ standard for Hydrogen to C++17.
* Added a new variant +apps to enable (or disable) python packages that
  are used by applications in the LBANN repo, but are not strictly
  required for building and using LBANN.
* Added a run time dependency for both py-pytest and py-scipy so that
  they are activated in any environment.
* Added support for building LBANN, Hydrogen, and DiHydrogen with the
  IBM ESSL BLAS library.  This requires explicit identification of
  additional LAPACK libraries, since ESSL does not implement LAPACK, but
  is found by CMake.
* Fixed a bug in the LBANN dependency on OpenCV for Power architectures.
  The +powerpc variant is only required for GCC toolchains and causes
  Clang to break. Switched to only enabling when using %gcc on power.
 2022-02-11 17:33:15 -08:00
Richarda Butler
af4d555c20 Update/caliper stand alone test compiler (#28526) 2022-02-11 15:02:40 -08:00
Simon Frasch
dc949a5bda spfft: fix missing hipFFT dependency with latest ROCm versions (#28880) 2022-02-11 14:17:40 -07:00
Teodor Nikolov
7ec9958b48 [rocm-smi-lib] Disable pdf generation with a patch (#28842) 
- Installation often hangs building the documentation. This happens when
  doxygen and latex are found. To avoid the issue, comment-out that part
  of the code until an explicit cmake variable to disable documentation
  generation is available.
 2022-02-11 13:47:50 -07:00
Cody Balos
853200c42d sundials: add new version and fix smoke tests (#28894) 
* sundials: fix smoke tests

* sundials: add new version

* use cmake+make instead of make for tests, fix style

* use cmake_bin workaround from https://github.com/spack/spack/pull/28622
 2022-02-11 12:23:58 -08:00
Dom Heinzeller
ef030ed0ee Bug fix for findutils: apply nonnull.patch only for versions 4.8.0+ (#28857) 2022-02-11 11:47:27 -07:00
haralmha
e365b05821 openloops: remove README from install prefix (#28767) 2022-02-11 11:11:33 -07:00
Glenn Johnson
61528c0b0a swftools package: patches for GCC@10: (#28296) 2022-02-11 09:54:53 -08:00
Danny McClanahan
e8838109d8 move typing_extensions.py back into typing.py =\ (#28549) 2022-02-11 09:52:01 -08:00
Mikael Simberg
389b24c4dc hpx: add conflict for Asio/CUDA (#27947) 
* Add missing Asio versions from 1.16.0 to 1.21.0

* Add conflict for Asio/CUDA to HPX package

Co-authored-by: Mikael Simberg <mikael.simberg@iki.if>
 2022-02-11 11:03:55 +01:00