Commit Graph

35620 Commits

Author SHA1 Message Date
Alec Scott
fff7e6d626 gradle: add v8.0.2 (#35873) 2023-03-07 17:50:06 -05:00
Alec Scott
ac1fe8765a gprolog: add v1.5.0 (#35874) 2023-03-07 17:23:21 -05:00
Alec Scott
acbf46d786 glpk: add v5.0 (#35871) 2023-03-07 17:22:56 -05:00
Alec Scott
a753fa12fb gegl: add v0.4.42 (#35866) 2023-03-07 17:22:35 -05:00
Alec Scott
27b2dc1608 fonttosfnt: add v1.2.2 (#35862) 2023-03-07 17:16:43 -05:00
Alec Scott
d8f8b42bcb fslsfonts: add v1.0.6 (#35869) 2023-03-07 16:58:59 -05:00
Alec Scott
3995428ad2 gatk: add v4.3.0.0 (#35864) 2023-03-07 16:53:15 -05:00
Alec Scott
76d41b7f9f fstobdf: add v1.0.7 (#35870) 2023-03-07 16:36:08 -05:00
Samuel Li
a7501105b1 update SPERR package (#35810)
* update SPERR package
* remove blank line
* update SPERR package
* remove blank line
---------

Co-authored-by: Samuel Li <Sam@Navada>
2023-03-07 12:26:43 -08:00
Adam J. Stewart
da33334488 py-pytorch-lightning: add v1.9.4 (#35791) 2023-03-07 12:08:47 -08:00
Adam J. Stewart
68dfcd10e6 py-pytorch-lightning: torch~distributed not supported in 1.9.0 (#35809) 2023-03-07 12:05:39 -08:00
Alec Scott
4e6a8a40b7 cloog: add v0.18.4 (#35849) 2023-03-07 11:55:00 -08:00
Alec Scott
20f663d089 dnsmasq: add v2.89 (#35851) 2023-03-07 11:54:37 -08:00
Cody Balos
acf61daf99 sundials: add new version (#35796) 2023-03-07 11:52:05 -08:00
Alec Scott
a0233d2560 cmocka: add v1.1.7 (#35848) 2023-03-07 11:49:42 -08:00
Alec Scott
8c989e0aee apr: add v1.7.2, apr-util 1.6.3 (#35832)
* apr: add v1.7.2
* apr-util: add v1.6.3
2023-03-07 11:48:39 -08:00
Alec Scott
2f5e7fb38c awscli: add v1.27.84 (#35836)
* awscli: add v1.27.84

* Add botocore dependency to awscli

* Update var/spack/repos/builtin/packages/awscli/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Add py-botocore@1.29.84 dependency

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-07 13:38:17 -06:00
Alec Scott
b9bc911921 cget: add v0.2.0 (#35846) 2023-03-07 13:10:56 -05:00
Alec Scott
462df718ff bc: add v1.07.1 (#35844) 2023-03-07 13:10:33 -05:00
Alec Scott
b20271a8e8 code-server: add v4.10.1 (#35855) 2023-03-07 12:06:01 -05:00
Alec Scott
a62992b4b1 easybuild: add v4.7.0 (#35853)
* easybuild: add v4.7.0

* Add v0.4.7 to all easybuild dependencies

* Reorder versions newest to oldest

* Fix styling on easybuild dependency loop
2023-03-07 12:05:39 -05:00
Alec Scott
818459e6fc dash: add v0.5.12 (#35850) 2023-03-07 11:48:05 -05:00
Alec Scott
38bd499c09 colordiff: add v1.0.21 (#35847) 2023-03-07 11:47:43 -05:00
Alec Scott
f9de4c2da8 aspell: add v0.60.8 (#35834) 2023-03-07 11:47:21 -05:00
Rocco Meli
335ae31a59 Update biopython, gsd, and griddataformats (#35827)
* update mda dependencies

* apply black

* Update var/spack/repos/builtin/packages/py-gsd/package.py

* Update var/spack/repos/builtin/packages/py-griddataformats/package.py

* Update var/spack/repos/builtin/packages/py-griddataformats/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* remove numpy upper bound

* Update var/spack/repos/builtin/packages/py-griddataformats/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/py-gsd/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-07 11:47:04 -05:00
Alec Scott
c4e5ee8831 beforelight: add v1.0.6 (#35843) 2023-03-07 11:32:17 -05:00
Alec Scott
73c358819b busybox: add v1.36.0 (#35840) 2023-03-07 11:31:52 -05:00
Alec Scott
6f396aff99 bitmap: add v1.1.0 (#35839) 2023-03-07 11:20:26 -05:00
Alec Scott
047b99fab9 blktrace: add v1.3.0 (#35842) 2023-03-07 10:56:31 -05:00
Alec Scott
a12a290ee1 bmake: add v20230303 (#35841) 2023-03-07 10:56:05 -05:00
Alec Scott
bd6c9085f0 atk: add v2.38.0 (#35833) 2023-03-07 10:55:48 -05:00
Alec Scott
c0a0d60378 appres: add v1.0.6 (#35831) 2023-03-07 10:55:29 -05:00
Alec Scott
bc84ca126e ace: add v7.1.0 (#35829) 2023-03-07 10:55:08 -05:00
Alec Scott
3bb7570e02 alglib: add v3.20.0 (#35830) 2023-03-07 10:44:09 -05:00
Adam J. Stewart
a5b80662ae py-matplotlib: add v3.7.1 (#35822) 2023-03-06 19:02:20 -05:00
John W. Parent
0c5360e3fd Proj: to CMake (#35108)
* update proj

* re-add autotools support

* style

* Setup env in builders

* Drop direct windows conflict for older versions

* Default to CMake

Add new style class definiton

* Proj: setup_run_environment in package not builder

* Proj: move run env changes to pkg, rm cmake arg

* Set PROJ_LIB during build

* Style

* Rm redundant configure arg
2023-03-06 17:23:34 -05:00
Greg Becker
2ff337a2a5 compiler flags: fix multiple compilers with different flags (#35721)
Currently, if two compilers with the same spec differ on the flags, the concretizer will:

1. mix both sets of flags for the spec in the ASP program
2. error noting that the set of flags from the compiler (both of them) doesn't match the set from the lower priority compiler

This PR fixes both -- only flags from the highest priority compiler with a given spec are considered.
2023-03-06 10:29:48 -08:00
Erik Heeren
f3841774f7 py-elasticsearch: new versions (#35764)
* py-elasticsearch: new versions

Also add py-elastic-transport as a new dependency

* py-elasticsearch: py-urllib3 is no longer a dependency

* Update var/spack/repos/builtin/packages/py-elasticsearch/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-06 10:30:31 -06:00
Alec Scott
97c2dd3a5a Add Hugo v0.111.1 (#35824) 2023-03-05 18:33:23 +01:00
Alec Scott
3aae80ca07 curl: add v7.88.1 and deprecate previous versions due to CVEs (#35825)
* curl: add v7.88.1 and deprecate previous versions due to CVEs

* Add self as a maintainer to curl
2023-03-05 18:32:56 +01:00
Alec Scott
973bc92813 libarchive: add v3.6.2 and deprecate previous versions due to CVE-2022-36227 (#35826) 2023-03-05 18:22:41 +01:00
Todd Gamblin
42a02411b4 windows: use sys.platform == "win32" instead of is_windows (#35640)
`mypy` only understands `sys.platform == "win32"`, not indirect assignments of that
value to things like `is_windows`. If we don't use the accepted platform checks, `mypy`
registers many Windows-only symbols as not present on Linux, when it should skip the
checks for platform-specific code.
2023-03-05 07:58:05 -08:00
Erik Heeren
4561536403 py-simpervisor: correct pypi (#35785) 2023-03-04 10:44:03 -06:00
MicK7
6b694749d3 Update python linting packages (#35811)
* add 2.14.2 py-astroid version

* add py-pylint 2.26.2

* fix black

* fix py-dill depends_on

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* fix py-astroid minor versionning

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* modify typing_extensions depends_on

---------

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-03 16:06:56 -06:00
MatthewLieber
c0f48b30cf Start using paths found in extra_rpaths in compilers.yaml when building (#35376)
* Start using paths found in extra_rpaths in compilers.yaml when building

* running black and changing maintainer list

* changing import order to pass isort

---------

Co-authored-by: Matthew Lieber <lieber.31@osu.edu>
2023-03-03 13:29:59 -08:00
Massimiliano Culpo
046416479a Polish spack.util.environment (#35812)
Update `spack.util.environment` to remove legacy idioms.
* Remove kwargs from method signature and use a class for traces
* Uppercase a few global variables
* spack.util.environment: add type-hints
* Improve docstrings
* Fixed most style issues reported by pylint
2023-03-03 16:17:27 -05:00
Lucas Frérot
b17113b63d snakemake: added versions 7.19.0-7.22.0 (#35535)
* snakemake: added versions 7.19.0-7.22.0

* snakemake: corrected +reports dependencies
2023-03-03 12:46:29 -06:00
Loïc Pottier
479f5a74a3 py-ipdb: updating versions (#35654)
* py-ipdb: updating versions

Signed-off-by: Loïc Pottier <pottier1@llnl.gov>

* py-ipdb: fixing versions problem and deleting 10.1 which is too old for Python > 3.6

Signed-off-by: Loïc Pottier <pottier1@llnl.gov>

* Update var/spack/repos/builtin/packages/py-ipdb/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-ipdb: removed useless dependencies

Signed-off-by: Loïc Pottier <pottier1@llnl.gov>

* Update var/spack/repos/builtin/packages/py-ipdb/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* Update var/spack/repos/builtin/packages/py-ipdb/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

* py-ipdb: missing @

Signed-off-by: Loïc Pottier <pottier1@llnl.gov>

* Update var/spack/repos/builtin/packages/py-ipdb/package.py

Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>

---------

Signed-off-by: Loïc Pottier <pottier1@llnl.gov>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-03 05:28:40 -05:00
kwryankrattiger
895886959f CI: Fix timeout for VisIt and ParaView (#35787)
ref. #35400
2023-03-03 09:13:14 +01:00
Jean Luca Bez
0bdb0b07fd update github URL (#35789) 2023-03-03 00:23:23 -05:00