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9238 Commits

Author SHA1 Message Date
Adam J. Stewart
f832f12ca6 Add latest version of py-pytest-runner (#13299) 2019-10-20 11:18:55 -05:00
Adam J. Stewart
3a2eeedf20 Add latest version of py-pytest-mock (#13300) 2019-10-20 11:18:39 -05:00
Adam J. Stewart
4d7226e561 Add latest version of py-pytest-httpbin (#13301) 2019-10-20 11:18:04 -05:00
Adam J. Stewart
63dd97f84e Add latest version of py-pytest-cov (#13302) 2019-10-20 11:17:47 -05:00
Adam J. Stewart
03b1af0d96 Add latest version of py-pysocks (#13303) 2019-10-20 11:17:27 -05:00
Adam J. Stewart
10065b325d Add latest version of py-pycparser (#13304) 2019-10-20 11:17:11 -05:00
Adam J. Stewart
d4f409ea51 Add latest version of py-psutil (#13305) 2019-10-20 11:16:53 -05:00
Adam J. Stewart
04af812e03 Add latest version of py-pip (#13306) 2019-10-20 11:16:36 -05:00
Adam J. Stewart
c130a2980f Add latest version of py-mock (#13308) 2019-10-20 11:16:07 -05:00
Adam J. Stewart
0d189e779a Add latest version of py-markupsafe (#13309) 2019-10-20 11:15:51 -05:00
Adam J. Stewart
30fdff4ff9 Add latest version of py-lxml (#13310) 2019-10-20 11:15:32 -05:00
Adam J. Stewart
51432aa92e Add latest version of py-jinja2 (#13311) 2019-10-20 11:15:16 -05:00
Adam J. Stewart
d61b5125c5 Add latest version of py-itsdangerous (#13312) 2019-10-20 11:15:01 -05:00
Adam J. Stewart
e05d165f92 Add latest version of py-idna (#13313) 2019-10-20 11:14:46 -05:00
Adam J. Stewart
ac0fee0f34 Add latest version of py-hypothesis (#13314) 2019-10-20 11:14:32 -05:00
Adam J. Stewart
5aea70e733 Add latest version of py-httpbin (#13315) 2019-10-20 11:14:17 -05:00
Adam J. Stewart
db8f83d333 Add latest version of py-flask (#13316) 2019-10-20 11:13:55 -05:00
Adam J. Stewart
de6d53b626 Add latest version of py-torchvision (#13289) 2019-10-20 11:12:43 -05:00
Adam J. Stewart
5995c3f85b Add latest version of py-typing-extensions (#13288) 2019-10-20 11:12:27 -05:00
Adam J. Stewart
4e2cce2c9f Add latest version of py-urllib3 (#13286) 2019-10-20 11:11:41 -05:00
Adam J. Stewart
d2202f6d98 Add latest version of py-virtualenv (#13285) 2019-10-20 11:11:23 -05:00
Adam J. Stewart
78942c7840 Add latest version of py-werkzeug (#13284) 2019-10-20 11:11:06 -05:00
Adam J. Stewart
0443581a20 Add py-mypy-extensions package (#13283) 2019-10-20 11:10:40 -05:00
Adam J. Stewart
92a359e4ba Add py-mypy package (#13282) 2019-10-20 11:10:22 -05:00
Adam J. Stewart
9ac7e098d9 Add py-pytest-forked package (#13281) 2019-10-20 11:10:04 -05:00
Adam J. Stewart
1dc99765e9 Add py-raven package (#13280) 2019-10-20 11:09:44 -05:00
Adam J. Stewart
a6bc0c7ee0 Add py-flake8-import-order package (#13273) 2019-10-20 11:09:23 -05:00
Adam J. Stewart
00f766b248 Add py-sphinxcontrib-devhelp package (#13278) 2019-10-20 11:09:04 -05:00
Adam J. Stewart
c8285da8e7 Add py-sphinxcontrib-applehelp package (#13279) 2019-10-20 11:08:51 -05:00
Adam J. Stewart
d37c95b80b Add py-sphinxcontrib-htmlhelp package (#13277) 2019-10-20 11:08:34 -05:00
Adam J. Stewart
7bda2fe292 Add py-sphinxcontrib-jsmath package (#13276) 2019-10-20 11:08:16 -05:00
Adam J. Stewart
d4ac57f3a3 Add py-sphinxcontrib-qthelp package (#13275) 2019-10-20 11:07:54 -05:00
Adam J. Stewart
f35bcaf83b Add py-sphinxcontrib-serializinghtml package (#13274) 2019-10-20 11:07:31 -05:00
Adam J. Stewart
3e18e664fc Add py-typed-ast package (#13272) 2019-10-20 11:07:01 -05:00
Adam J. Stewart
95b7f31112 Add py-docutils-stubs package (#13271) 2019-10-20 11:06:38 -05:00
Adam J. Stewart
4f56bcc790 Add py-brotlipy package (#13270) 2019-10-20 11:06:18 -05:00
Adam J. Stewart
0fb563f3d9 GCC: fix build on macOS Catalina (#13202) 
* GCC: speed up build

* Add back 3-stage bootstrapping
 2019-10-19 12:18:31 -05:00
Adam J. Stewart
306346356c brotli: fix darwin install name (#13258) 2019-10-19 12:18:06 -05:00
Axel Huebl
327a7368e9 ADIOS2: Dataspaces, libffi, libfabric (#13230) 
* DataSpaces: 1.8.0

Add a newer release of DataSpaces for ADIOS2.
Also add missing `-fPIC` flags since this is a static library.

* ADIOS2: Dataspaces, libffi, libfabric

Add missing dependencies to ADIOS2. Without explicit control,
those dependencies might get picked up from the system environment
and will cause unstable builds.

* Hide transitive SST dependencies

* ADIOS2: Simplify SST CMake Flags

As proposed by Chuck
 2019-10-18 13:26:56 -07:00
wspear
f9e7bf295c Updated to latest version. Removed dependency on node-js (#13055) 
* Updated to latest version. Removed dependency on node-js

* Refined dependencies

* Added dependencies, including version-specific ones. Re-added 0.9.4.

* Updated py-jupyterhub requirements. Enabled version 0.9.4 and 1.0.0
 2019-10-18 12:53:47 -05:00
Christoph Junghans
b4383825be fftw: altivec only works for float (#13242) 2019-10-18 10:36:40 -06:00
wspear
40a11c6bf6 Added package py-python-oauth2, a dependency of py-jupyterhub@0.9.4. … (#13140) 
* Added package py-python-oauth2, a dependency of py-jupyterhub@0.9.4. Depends on #13132, #13133 and #13134

* Remove optional dependencies
 2019-10-18 11:29:26 -05:00
Justin S
af3c238c31 interproscan: add 5.38-76.0 (#13253) 2019-10-17 20:52:54 -05:00
Massimiliano Culpo
9ddc98e46a Separate setting build environment and run environment in packages (#11115) 
* Methods setting the environment now do it separately for build and run

Before this commit the `*_environment` methods were setting
modifications to both the build-time and run-time environment
simultaneously. This might cause issues as the two environments
inherently rely on different preconditions:

1. The build-time environment is set before building a package, thus
the package prefix doesn't exist and can't be inspected

2. The run-time environment instead is set assuming the target package
has been already installed

Here we split each of these functions into two: one setting the
build-time environment, one the run-time.

We also adopt a fallback strategy that inspects for old methods and
executes them as before, but prints a deprecation warning to tty. This
permits to port packages to use the new methods in a distributed way,
rather than having to modify all the packages at once.

* Added a test that fails if any package uses the old API

Marked the test xfail for now as we have a lot of packages in that
state.

* Added a test to check that a package modified by a PR is up to date

This test can be used any time we deprecate a method call to ensure
that during the first modification of the package we update also
the deprecated calls.

* Updated documentation
 2019-10-17 10:17:21 -07:00
wspear
93c34039e4 python-editor: added new package at v1.0.4 (#13126) 2019-10-17 08:46:34 +02:00
Christoph Junghans
6cd997e743 eospac: avoid conflict with linux's getopt (#13241) 
* eospac: avoid conflict with linux's getopt

* Update package.py
 2019-10-16 18:46:26 -07:00
Jeffrey Salmond
e17df2e8f5 add python version 3.8.0 (#13218) 2019-10-16 14:42:36 -07:00
Christoph Junghans
b0543005b2 expat: don't pick up external docbook (#13228) 2019-10-16 05:59:51 -07:00
Jeffrey Salmond
f08f4201c7 add latest version of vim (#13203) 2019-10-15 20:43:03 -07:00
Satish Balay
5ea0eed287 hypre: add version 2.18.1 (#13224) 2019-10-15 13:05:51 -07:00