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Author SHA1 Message Date
Manuela Kuhn
924be97a9b py-docutils: add 0.18.1 (#28976) 2022-02-15 22:20:34 -07:00
Manuela Kuhn
dfd83e60ac py-argon2-cffi: add 21.3.0 (#28968) 2022-02-15 22:14:24 -07:00
Manuela Kuhn
0f9f636f38 py-distlib: add 0.3.4 (#28975) 2022-02-15 22:35:17 -06:00
Manuela Kuhn
2fa892daa2 py-decorator: add 5.1.1 (#28953) 2022-02-15 18:57:23 -07:00
Manuela Kuhn
c433a35fdb py-datalad: add 0.15.5 (#28952) 
* py-datalad: add 0.15.5

* Move dependency position
 2022-02-15 17:02:53 -07:00
Manuela Kuhn
23ddfba16d py-cryptography: add 36.0.1 (#28950) 2022-02-15 16:44:37 -07:00
Filippo Spiga
52d4e209e2 Adding NVIDIA HPC SDK 22.2 (#28874) 2022-02-15 16:41:42 -07:00
Massimiliano Culpo
5b34b947a8 archspec: remove pyproject.toml to workaround PEP517 (#28956) 
* archspec: remove pyproject.toml to workaround PEP517

If pyproject.toml is in the folder, that is preferred to the
setup.py packaged by poetry itself. Adding a dependency on
poetry for deploying a pure Python package seems wasteful,
since the package to be deployed just needs to be copied in
place, so we don't want to built rust for that.

* archspec: patch pyproject.toml to comply to PEP517

See https://python-poetry.org/docs/pyproject/#poetry-and-pep-517

* Fix style issues
 2022-02-15 16:14:39 -07:00
Paul Romano
dea9766336 OpenMC: new version 0.13.0 (#28929) 2022-02-15 16:11:33 -07:00
Manuela Kuhn
939e94790f py-argon2-cffi-bindings: add new package (#28943) 2022-02-15 15:14:25 -07:00
Christoph Conrads
9da8f18e3a FEniCS: avoid HDF5 version 1.12+ (#28920) 
The new HDF5 version 1.12 API causes compiler errors due to modified function prototypes. Note that version 1.11 is the development version of HDF5 1.12.
 2022-02-15 15:09:08 -07:00
Manuela Kuhn
f707987275 py-coverage: add 6.3.1 (#28946) 2022-02-15 15:08:37 -07:00
Manuela Kuhn
39c4af5f79 py-numba: add 0.55.1 (#28933) 
* py-numba: add 0.55.1

* Remove comment

* Pin down py-llvmlite version for older py-numba releases

* Remove py-llvmlite deps for releases not in spack

* Set upper bounds for python and py-numpy

* Add stricter upper bound to py-numpy for releases <=0.47
 2022-02-15 15:02:29 -07:00
Manuela Kuhn
9cd311c82d py-argcomplete: add 2.0.0 (#28942) 2022-02-15 14:44:38 -07:00
Manuela Kuhn
53ca65b103 py-memory-profiler: add 0.60.0 (#28918) 2022-02-15 13:29:49 -07:00
Seth R. Johnson
c987d06a19 github: add default value for spack spec and error message (#28796) 2022-02-15 18:50:21 +00:00
Stephen Sachs
79f22423b8 intel compiler: fix link time error with LLVMgold.so (#28731) 
The Intel compiler will, at link time, call `ld -plugin LLVMgold.so`, which
expects libraries like `libimfo.so` to be found either in the `LD_LIBRARY_PATH` or
in `LLVMgold.so`s RPATH.

As `LLVMgold.so` already uses RUNPATH, I used that to extend this to the
necessary library locations.

This PR should fix issues:
https://github.com/spack/spack/issues/10308
https://github.com/spack/spack/issues/18606
https://github.com/spack/spack/issues/17100
https://github.com/spack/spack/issues/21237
https://github.com/spack/spack/issues/4261

Co-authored-by: Stephen Sachs <stesachs@amazon.com>
 2022-02-15 17:47:29 +00:00
Harmen Stoppels
cebe4fdf1d Make spack -e [env] spec show environment root specs (#25941) 2022-02-15 09:42:05 -08:00
Anton Kozhevnikov
d61c1f623c SIRIUS: optionlal dependency on Python (#28711) 
* depend on Python only when building the module

* fixes for shared costa libray

* add deprecated=True for old packages
 2022-02-15 10:23:37 -07:00
Harmen Stoppels
55996d3ad4 Unalias despacktivate only when alias exists (#28939) 2022-02-15 16:21:19 +01:00
acastanedam
3640c258dc direnv: fix installation procedure (#28940) 
Setting Spack's `$prefix` to `$DESTDIR` and not to `$PREFIX` install the
package in `$prefix/usr/local` and not in `$prefix`, thus when it is
loaded the executable `direnv` in not "seen" by the environment.
 2022-02-15 08:17:41 -07:00
Nils Vu
a8d440d3ab spectre: patch Boost pre v1.67 (#28931) 2022-02-15 15:13:13 +01:00
dlkuehn
7fc9c16f9e genometools: add v1.6.2 (#28936) 
Co-authored-by: las_dkuehn <las_dkuehn@gilman-0107-02.las.iastate.edu>
 2022-02-15 15:11:38 +01:00
Wouter Deconinck
6864b28fd8 dd4hep: add v1.20 (#28937) 
No major changes to the build system, https://github.com/AIDASoft/DD4hep/compare/v01-19...v01-20
 2022-02-15 15:06:43 +01:00
Cody Balos
cf0c9affff sundials: use make for some of the smoke tests (#28938) 2022-02-15 15:03:58 +01:00
Mark W. Krentel
09a8656f1f meson: add versions 0.61.2 and 0.60.3 (#28934) 2022-02-15 05:20:34 -07:00
Manuela Kuhn
9f1c6c0c29 py-anyio: add 3.5.0 (#28915) 
* py-anyio: add 3.5.0

* Add wheel dependency
 2022-02-15 03:38:17 -07:00
Mikael Simberg
fdec3b47cc apex: add patch to install missing header (#28844) 
Co-authored-by: Mikael Simberg <mikael.simberg@iki.if>
 2022-02-15 01:59:39 -07:00
Daniele Cesarini
c313a72e76 New quantum-espresso maintainer (#28927) 2022-02-15 09:32:46 +01:00
Manuela Kuhn
28caa0225f py-attrs: add 21.4.0 (#28914) 2022-02-14 22:50:55 -07:00
Manuela Kuhn
30fafa63e0 py-jsonschema: add 4.4.0 (#28919) 2022-02-14 22:50:37 -07:00
Seth R. Johnson
08cad7d0ee darwin: make sure MACOSX_DEPLOYMENT_TARGET has a minor component (#28926) 2022-02-15 05:50:22 +00:00
luker
9165e3fb86 updated cray-fftw (#28922) 
added the latest cray-fftw version, added myself as a maintainer, updated the homepage
 2022-02-14 22:14:39 -07:00
Pierre Neyron
d54a5d9dd8 py-pyopencl: fix dependency to py-six (#28916) (#28917) 2022-02-14 19:59:25 -07:00
Sreenivasa Murthy Kolam
76489eb213 replace mesa18 recipe with mesa recipe for the rocm releases (#28491) 2022-02-14 16:29:45 -06:00
ravil-mobile
64dd6378d4 easi: add new package (#28828) 
Co-authored-by: ravil <ravil.dorozhinskii@tum.de>
 2022-02-14 15:29:32 -07:00
Manuela Kuhn
67ea14098d py-bids-validator: add 1.8.9 (#28913) 2022-02-14 14:53:29 -07:00
MichaelLaufer
5b80c4ab6c New package: py-pyfr (#28847) 
* Initial support for PyFR

* styling

* fixes

* more syling fixes

* fixes for dependencies

* add min rocblas version
 2022-02-14 15:43:18 -06:00
Tom Vander Aa
1377c02e26 intel-oneapi-mpi: set I_MPI_ROOT in setup_dependent_build_environment (#28890) 
* setting I_MPI_ROOT is sometimes needed for find_package(MPI) in cmake to work
 2022-02-14 13:23:35 -07:00
Thomas Madlener
13013d0291 fastjet add v3.3.4, fjcontrib add v1.045 (#22667) 2022-02-14 13:23:06 -07:00
estewart08
fe35ce1843 AMD rocm-openmp-extras: add v4.5.2 (#28790) 2022-02-14 10:14:44 -07:00
Toyohisa Kameyama
5353032eef Python: fix build with Fujitsu compiler (#28744) 2022-02-14 08:06:34 -06:00
Olli Lupton
dc57f987a7 py-{mizani,plotnine}: add packages. (#28841) 
* py-{mizani,plotnine}: add packages.

* Add missing python dependency.
 2022-02-14 03:20:29 -07:00
G-Ragghianti
aa6e725633 magma: move the execution of stand-alone tests to preferred directory (#28895) 2022-02-14 11:19:45 +01:00
John Wohlbier
9649246764 palisade-development: change fppe-logreg variant to point to a stable tag instead of a branch (#28717) 
Co-authored-by: John Wohlbier <jgwohlbier@sei.cmu.edu>
 2022-02-14 11:18:38 +01:00
Adam J. Stewart
b0658b8b03 py-pandas: add v1.4.1 (#28904) 2022-02-14 11:01:13 +01:00
Adam J. Stewart
e0a0f41ff9 py-mypy: add new versions (#28905) 2022-02-14 11:01:00 +01:00
Seth R. Johnson
3a4ab5f96f trilinos: disable UVM for 13.2+ (#28879) 2022-02-14 10:54:15 +01:00
Jen Herting
2c56cbd2bc [py-ctgan] fixed py-torchvision version range (#28892) 2022-02-13 22:26:10 -07:00
Harmen Stoppels
bece9fd823 Bump libtree (#28908) 2022-02-13 15:50:15 -08:00